BAC Information

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BAC

Clone NameB6Ng01-155N15
Chromosome2 (Build37)
Map Location 75,959,627 - 76,071,330
singlet/doubletdoublet
Overlap genePde11a
Upstream geneA330043C09Rik, LOC667739, LOC545423, LOC100040324, LOC667828, Hnrpa3, Nfe2l2, E030042O20Rik, LOC623453, Agps, Ttc30b, Ttc30a2, Ttc30a1
Downstream geneCyct, Drbp1, Osbpl6, Prkra, Dfnb59, Fkbp7, Plekha3, Ttn, 2610301F02Rik, Sestd1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-155N15.bB6Ng01-155N15.g
ACCDH950515DH950516
length1,1221,165
definitionDH950515|Mus musculus domesticus DNA, BAC clone: B6Ng01-155N15, 5' end.DH950516|Mus musculus domesticus DNA, BAC clone: B6Ng01-155N15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(75,959,627 - 75,960,764)(76,070,145 - 76,071,330)
sequence
gaattctcaagactggccatttctgtctagctggcaaacttggttttcct
aattatcaccgtttaggatgccagcattgggaagcagaattgcttgacct
ttgaactcactatcctcactccactggccttataattttggcctagtttc
ttagctcaaggatcagtttccttgtgaatagaagggagacgataccttcc
ctttccgattaagttccacccgccagagtgtcttagtcactgttctgttg
ctgggaagagacaatggtcacagcagttcttataccaatatcatttaact
gggggcttgcttacagtttcagaggtttggtccactgtcatgatgctagg
gagcatgctggcacgtgggcaggtgctggagcagtggctgagtgctacag
cagggtctacaggcagcaagagacactgggcttagcatggggtcttgaaa
cctcaaaggtcaccccaatgaaacacttcttccaacagggccatgcctcc
taatcctttcaaataatgctactctttggttattaagcaatcaaatatat
gagcctatggtgggggggcattcttattcaatccactagaagagcaattt
acaagtccctttcactctaaccatgaaggaaaagcaatcctaccatggac
cctgaaaaaagagggcccgaacaacttgatgctgggccagaatggttacc
atgaagaatgagcaaaacaaatagcaatttaagattgtggtagagattgt
gtctaaaatcgagcaaatgagcccaggacgtgaactctaccatgtgaacg
ctgtggtttattcggtgtttttattacttcctagttcctttctgtattat
gaaggttgtggttggtagataagatctccaagtgagattatagtatatgc
atattagatactgtttaacatatatgacacatatggcatttgattattac
atattattacatttgattaaacccatcctatccccatgggaaacgttata
tagaagatgggtgcggactggcttatttctgtgatataactgtcagaacg
ctattcacgtcatcaattaatgtcatagagaagagacgccattttctttg
ggaaagtttcacgtgatgattt
gaattctggggagcgagtggtaggagaaatggatcaaggcaggaaacacc
agagacagcaaggctgctcaggagatttttctggtggtgcaattggtagt
taattggatcttatagaatagaattttaaacctaccagagtatccatgtc
tttcatgtctacacagtgggtagaaactttaatacacaggctaaaatata
tgagatttgagactggaagggaaaagaagcccacaaaactagaaccaaaa
caaacaaaccctgaaaaaaactaataaaacaaaatctaaatgaaaaaaaa
agaaataaaactcatatctaaaacctaagtataaataagaatttccctac
taccttactatatttttgtaattaacaaaaaccaaaaacagttgtagaac
attttgaaaatttccactcccctttggaacatttttaagaaggagtctta
gcctttaaatggccaattcccccaagctagaccctgctctgtctctgtct
atgggctccaagtcttcttgcccagcattgctggcccttggtgcctctag
gagccacttgcttacttaaatatccactgagtcataacatgaagaaggag
atattgaacaatgagtccaaaacatgctattggtgaagctgtaaattaat
tctgctagacattgagtttgttctcagtaagaggacagataaagccgggc
gtggtggcacacacatttaatcccagcactcgggaggcagaggcaagccg
atttctgagttcgagggcagcctggtctacaaagtgagttccaggacagc
cagggctatacagagaaaccctgtctcgaaaaccaaaaaaccaaaaaacc
aacaacacaaaaaaagaggaccggtaagacaacctaaaactagtattttc
tacaatgctccttaatctataatgaaatcataagggaaagaattggtgag
ctccttttcaacttttaaaattatttagtagaagcacagatgataaatca
ggatttcttcgtcctcatgccaggaataaaaagcatcattatgatcattc
ccatcacaatacaacacacacaccacagccacctggagtacaagcacttt
taaggagtggctatcaggtgctaggtctaccttggtgatgagcggtgtat
gccttgctaggacag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_75959627_75960764
seq2: B6Ng01-155N15.b_49_1170

seq1  GAATTCTCAAGACTGGCCATTTCTGTCTAGCTGGCAAACTTGGTTTTCCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCAAGACTGGCCATTTCTGTCTAGCTGGCAAACTTGGTTTTCCT  50

seq1  AATTATCACCGTTTAGGATGCCAGCATTGGGAAGCAGAATTGCTTGACCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATCACCGTTTAGGATGCCAGCATTGGGAAGCAGAATTGCTTGACCT  100

seq1  TTGAACTCACTATCCTCACTCCACTGGCCTTATAATTTTGGCCTAGTTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAACTCACTATCCTCACTCCACTGGCCTTATAATTTTGGCCTAGTTTC  150

seq1  TTAGCTCAAGGATCAGTTTCCTTGTGAATAGAAGGGAGACGATACCTTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCTCAAGGATCAGTTTCCTTGTGAATAGAAGGGAGACGATACCTTCC  200

seq1  CTTTCCGATTAAGTTCCACCCGCCAGAGTGTCTTAGTCACTGTTCTGTTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCCGATTAAGTTCCACCCGCCAGAGTGTCTTAGTCACTGTTCTGTTG  250

seq1  CTGGGAAGAGACAATGGTCACAGCAGTTCTTATACCAATATCATTTAACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGAAGAGACAATGGTCACAGCAGTTCTTATACCAATATCATTTAACT  300

seq1  GGGGGCTTGCTTACAGTTTCAGAGGTTTGGTCCACTGTCATGATGCTAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGCTTGCTTACAGTTTCAGAGGTTTGGTCCACTGTCATGATGCTAGG  350

seq1  GAGCATGCTGGCACGTGGGCAGGTGCTGGAGCAGTGGCTGAGTGCTACAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCATGCTGGCACGTGGGCAGGTGCTGGAGCAGTGGCTGAGTGCTACAG  400

seq1  CAGGGTCTACAGGCAGCAAGAGACACTGGGCTTAGCATGGGGTCTTGAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGTCTACAGGCAGCAAGAGACACTGGGCTTAGCATGGGGTCTTGAAA  450

seq1  CCTCAAAGGTCACCCCAATGAAACACTTCTTCCAACAGGGCCATGCCTCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAAAGGTCACCCCAATGAAACACTTCTTCCAACAGGGCCATGCCTCC  500

seq1  TAATCCTTTCAAATAATGCTACTCTTTGGTTATTAAGCAATCAAATATAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCCTTTCAAATAATGCTACTCTTTGGTTATTAAGCAATCAAATATAT  550

seq1  GAGCCTATGGTGGGGGGGCATTCTTATTCAATCCACTAGAAGAGCAATTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCTATGGTGGGGGGGCATTCTTATTCAATCCACTAGAAGAGCAATTT  600

seq1  ACAAGTCCCTTTCACTCTAACCATGAAGGAAAAGCAATCCTACCATGGAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGTCCCTTTCACTCTAACCATGAAGGAAAAGCAATCCTACCATGGAC  650

seq1  CCTGAAAAAAGAGGGCCCGAACAACTTGATGCTGGGCCAGAATGGTTACC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAAAAAAGAGGGCCCGAACAACTTGATGCTGGGCCAGAATGGTTACC  700

seq1  ATGAAGAATGAGCAAAACAAATAGCAATTTAAGATTGTGGTAGAGATTGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAGAATGAGCAAAACAAATAGCAATTTAAGATTGTGGTAGAGATTGT  750

seq1  GTCTAAAATCGAGCAAATGAGCCCAGGACGTGAACTCTACCATGTGAACG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTAAAATCGAGCAAATGAGCCCAGGACGTGAACTCTACCATGTGAACG  800

seq1  CTGTGGTTTATTCGGTGTTTTTATTACTTCCTAGTTCCTTTCTGTATTAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGGTTTATTCGGTGTTTTTATTACTTCCTAGTTCCTTTCTGTATTAT  850

seq1  GAAGGTTGTGGTTGGTAGATAAGATCTCCAAGTGAGATTATAGTATATGC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGTTGTGGTTGGTAGATAAGATCTCCAAGTGAGATTATAGTATATGC  900

seq1  ATATTAGATACTGTTTAACATATATGACACATATGGCATTTGATTATTAC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTAGATACTGTTTAACATATATGACACATATGGCATTTGATTATTAC  950

seq1  ATATTATTACATTTGATTAAACCCATCCTAATCCCCATGGGAAACGTTAT  1000
      ||||||||||||||||||||||||||||| ||||||||||||||||||| 
seq2  ATATTATTACATTTGATTAAACCCATCCT-ATCCCCATGGGAAACGTTA-  998

seq1  TATAAGAGATGGGTGCGGACTGGCTTATTTCTGTGATATAACTGTCAGGA  1050
      ||||  ||||||||||||||||||||||||||||||||||||||||||  
seq2  TATAGAAGATGGGTGCGGACTGGCTTATTTCTGTGATATAACTGTCAG--  1046

seq1  AACGCCTATTCACTTCAATCACATAAATGTCATTAGGAAGA-AAGAGACA  1099
      |||| |||||||| || |||| || ||||||||     ||| ||||||| 
seq2  AACG-CTATTCACGTC-ATCA-ATTAATGTCAT-----AGAGAAGAGAC-  1087

seq1  GCCATTTTCTTTGGAGAAAGTTTCACGTGGTAATGATTT  1138
      |||||||||||||| ||||||||||||||   |||||||
seq2  GCCATTTTCTTTGG-GAAAGTTTCACGTG---ATGATTT  1122

seq1: chr2_76070145_76071330
seq2: B6Ng01-155N15.g_69_1233 (reverse)

seq1  CTGTCCTAGCAAGCACTACACGGCTCATCA-CAGGGTAGACCTAGCA-CT  48
      |||||||||||||   ||||| |||||||| || ||||||||||||| ||
seq2  CTGTCCTAGCAAGGCATACACCGCTCATCACCAAGGTAGACCTAGCACCT  50

seq1  GATAGCAACTTCTTAATAAGTGCTTTTGGTTAACTTCAGATGGCTTGTGG  98
      |||||| ||| ||||| |||||||| |     ||| ||| |||| |||||
seq2  GATAGCCACTCCTTAA-AAGTGCTTGT-----ACTCCAGGTGGC-TGTGG  93

seq1  TTGTGGTTGTTGTTGTTATTGTTGATGGTGATGATCATAATGATGCTTTT  148
       ||||  |||||    ||||| ||||||  ||||||||||||||||||||
seq2  -TGTGTGTGTTG----TATTG-TGATGGGAATGATCATAATGATGCTTTT  137

seq1  TATTTCCTTGGCATGGGGGACGAGGAAATCCTTGATTTATCATCTGTGCT  198
      ||||  | |||||| | |||||| ||||||| ||||||||||||||||||
seq2  TATT--CCTGGCAT-GAGGACGAAGAAATCC-TGATTTATCATCTGTGCT  183

seq1  TCTACTAAATAATTTTTAAAAGTTGAAAAGGAGCTCACCAATTCTTTCCC  248
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  TCTACTAAATAA-TTTTAAAAGTTGAAAAGGAGCTCACCAATTCTTTCCC  232

seq1  TTATGATTTCATTATAGATTAAGGAGCATTTGTAGAAAATACTAGTTTTA  298
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  TTATGATTTCATTATAGATTAAGGAGCA-TTGTAGAAAATACTAGTTTTA  281

seq1  GGTTGTCTTACCGGTCCTCTTTTTTTTGTTGTTGTTGGTTTTTTTGGTTT  348
      ||||||||||||||||||||||||||   ||||||||| |||||||||||
seq2  GGTTGTCTTACCGGTCCTCTTTTTTT--GTGTTGTTGG-TTTTTTGGTTT  328

seq1  TTTGGTTTTTCGAGACAGGGTTTCTCTGTATAGCCCTGGCTGTCCTGGAA  398
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGG-TTTTCGAGACAGGGTTTCTCTGTATAGCCCTGGCTGTCCTGGAA  377

seq1  CTCACTTTGTAGACCAGGCTGCCCTCGAACTCAGAAATCGGCTTGCCTCT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACTTTGTAGACCAGGCTGCCCTCGAACTCAGAAATCGGCTTGCCTCT  427

seq1  GCCTCCCGAGTGCTGGGATTAAATGTGTGTGCCACCACGCCCGGCTTTAT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCCCGAGTGCTGGGATTAAATGTGTGTGCCACCACGCCCGGCTTTAT  477

seq1  CTGTCCTCTTACTGAGAACAAACTCAATGTCTAGCAGAATTAATTTACAG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCCTCTTACTGAGAACAAACTCAATGTCTAGCAGAATTAATTTACAG  527

seq1  CTTCACCAATAGCATGTTTTGGACTCATTGTTCAATATCTCCTTCTTCAT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCACCAATAGCATGTTTTGGACTCATTGTTCAATATCTCCTTCTTCAT  577

seq1  GTTATGACTCAGTGGATATTTAAGTAAGCAAGTGGCTCCTAGAGGCACCA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATGACTCAGTGGATATTTAAGTAAGCAAGTGGCTCCTAGAGGCACCA  627

seq1  AGGGCCAGCAATGCTGGGCAAGAAGACTTGGAGCCCATAGACAGAGACAG  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCCAGCAATGCTGGGCAAGAAGACTTGGAGCCCATAGACAGAGACAG  677

seq1  AGCAGGGTCTAGCTTGGGGGAATTGGCCATTTAAAGGCTAAGACTCCTTC  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGGGTCTAGCTTGGGGGAATTGGCCATTTAAAGGCTAAGACTCCTTC  727

seq1  TTAAAAATGTTCCAAAGGGGAGTGGAAATTTTCAAAATGTTCTACAACTG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAATGTTCCAAAGGGGAGTGGAAATTTTCAAAATGTTCTACAACTG  777

seq1  TTTTTGGTTTTTGTTAATTACAAAAATATAGTAAGGTAGTAGGGAAATTC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGGTTTTTGTTAATTACAAAAATATAGTAAGGTAGTAGGGAAATTC  827

seq1  TTATTTATACTTAGGTTTTAGATATGAGTTTTATTTCTTTTTTTTTCATT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTATACTTAGGTTTTAGATATGAGTTTTATTTCTTTTTTTTTCATT  877

seq1  TAGATTTTGTTTTATTAGTTTTTTTCAGGGTTTGTTTGTTTTGGTTCTAG  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATTTTGTTTTATTAGTTTTTTTCAGGGTTTGTTTGTTTTGGTTCTAG  927

seq1  TTTTGTGGGCTTCTTTTCCCTTCCAGTCTCAAATCTCATATATTTTAGCC  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTGGGCTTCTTTTCCCTTCCAGTCTCAAATCTCATATATTTTAGCC  977

seq1  TGTGTATTAAAGTTTCTACCCACTGTGTAGACATGAAAGACATGGATACT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTATTAAAGTTTCTACCCACTGTGTAGACATGAAAGACATGGATACT  1027

seq1  CTGGTAGGTTTAAAATTCTATTCTATAAGATCCAATTAACTACCAATTGC  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTAGGTTTAAAATTCTATTCTATAAGATCCAATTAACTACCAATTGC  1077

seq1  ACCACCAGAAAAATCTCCTGAGCAGCCTTGCTGTCTCTGGTGTTTCCTGC  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACCAGAAAAATCTCCTGAGCAGCCTTGCTGTCTCTGGTGTTTCCTGC  1127

seq1  CTTGATCCATTTCTCCTACCACTCGCTCCCCAGAATTC  1186
      ||||||||||||||||||||||||||||||||||||||
seq2  CTTGATCCATTTCTCCTACCACTCGCTCCCCAGAATTC  1165