BAC Information

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BAC

Clone NameB6Ng01-156K20
Chromosome2 (Build37)
Map Location 126,273,219 - 126,396,960
singlet/doubletdoublet
Overlap geneSlc27a2
Upstream geneFbn1, Cep152, Shc4, Eid1, 3110001I20Rik, Cops2, Galk2, Fgf7, Dtwd1, Atp8b4
Downstream geneHdc, Gabpb1, Usp8, LOC100043714, Usp50, Trpm7, 2010106G01Rik, Ap4e1, Blvra, Ncaph, 1700041B20Rik, 1810024B03Rik, LOC100043408, Ascc3l1, Ciao1, Tmem127, ENSMUSG00000074822, Stard7, Dusp2, Astl, Adra2b, A530057A03Rik, Fahd2a, Kcnip3, Prom2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-156K20.bB6Ng01-156K20.g
ACCDH951118DH951119
length1,1781,097
definitionDH951118|Mus musculus domesticus DNA, BAC clone: B6Ng01-156K20, 5' end.DH951119|Mus musculus domesticus DNA, BAC clone: B6Ng01-156K20, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(126,395,747 - 126,396,960)(126,273,219 - 126,274,325)
sequence
gaattctatatggacaataacttgcttagaattctgaaggcatcacacca
ttgcctccttgttttcagggctgctgtcagaatttaaatgttcttataca
atgaatccaccctctccccgcatccccccaccccaaacaggtatcctgtt
acctgactcttgggttttgccttccttggactaccatgttagctccctcc
acatttcagatttctattctatgtagttcaaggttgcaatatcttttagc
tttaaaataatatttgatttatttgatatgcatgggtgctctgcctgcag
gtatgaatgtgtaccacatgcattcctggtgccagaagaggatagaaagg
ggtgtcagaactcctggaactggagttatggatggttgtgagccatcctg
tggatgttgggtatcaaactctggtccaaatagttttgactgctgaattg
ctggtctagcctctcttagttctttagataatgcagcttgtgtactttct
tcccttggcattcacatttctgtgcaacttttaagaggtatcttcaaaca
ttcctaagtccatgttcttaacacttactgtgctgtacacaagggaggtc
ccacctgcctgcttcagccaagaggcctttctcctcccatcaaaccctcc
tacctcacacttccatgtgaggctgtccaagaggcttactgggctacaca
ctctgctcacttcctgcagagctgtttgcagtttgacagattcttcaaca
tgcctttcatgttcttccagataacctgaagccacctttctgtgactgac
tggagaacttccatgtgccatcacagctcattgtctctggccaaccttcc
tgattctttcctcttttcctctttctccactttgcctctatttactctgt
accctgttctggcacataccattctgtccagtttctaccaggattcagtg
gttcagctgggaagactggagaggccaccgcatgtaaggcatgcagacat
cacaggagaaagctgagactctgcagctccccactgtctgtctctctcag
ctcttcaggtatctgattttttctttgggctccagatgctctggattctc
cttgcttctctttgtttccttgtgaccctcatcccgatcacgattacgaa
tctcacttgagaaccttacttcttagtt
gaattcctttagaagacaacatttaaaatatatttcctagcagaatagaa
agaaatacaggtcagtattaaatgatgagtataaataggcaagtaacaca
aaaaaaataataaataagagctaataaatgtgttcgaaaacacaatcact
agaaattgggtgtgcccatttcttaaatgaatgtaacctgttccctgcgg
gctgagaatgacaacaatcactcaagtcaaatagctttgaccacagcagg
aaatctgtatccaaaactcatgcctacaattcattccttggagcagcaga
acggtcagctcttagcttatctactatggaggtaaaatcctttaagtaca
gctttattacaatgaactccaatgtccaaaaagtgttcttattttgtgtt
tgtaccacagtaagagccaagattttaagctctactaaaaacaaaacaag
caaacaaataaaaagactttatctatttatgttcatttaaaaaactaata
aagatatattattttaaaatatcatacagttaatatatttgaagttattt
aaaatttatattgagaaaatgtgtgtattttcagtattgctgtagacaag
catctacataagactgttcaattgattgttgttttatatcaaacaacttt
cataatactcatttttattgttaaaatactttataaattttaaagagtat
gataaaatgaaaggtattgcaggttttgaagaggggaggctctcaggaag
gagttggggtacaaaagggaaagaagaatgtgatgtcaatctatttactc
aaaatgtgttgttaaatgttcagataaattgaaattatgtatcttttttt
catcataatgcaataaaactaaaatttgaaaaaacaaagaaagaaatggg
gtgtgcaggtgggtctccacattcacagccagatgtttaggagctgatac
tcaaagtcacagtgatgctgtggaaacagcattcatcagttcagacatga
gagtgagttcacataaacttcttgaaatgatttcagtataatttttatat
gcctctgttcttctttagagactttcgctttgccaacgaatccatta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_126395747_126396960
seq2: B6Ng01-156K20.b_45_1222 (reverse)

seq1  AACTAAGAGAAGGTAAATGGTTCTC-AGTGAGATTCTGTGTATCTGCTGG  49
      |||||||   | ||||  ||||||| ||||||||||   |||     | |
seq2  AACTAAG---AAGTAA--GGTTCTCAAGTGAGATTC---GTA----ATCG  38

seq1  GGTGCGGGGTGAGGGTGTCACCAAGGAGAACAAAGAGAGAGGCAAGGAGG  99
       |  |||| |||||  |||| |||||| |||||  ||||| ||||||| |
seq2  TGATCGGGATGAGG--GTCA-CAAGGA-AACAA--AGAGAAGCAAGGA-G  81

seq1  AATCCAGAAGCATTCTGGGAGCCACAAGGAAAAAATCAAGATACTTGAAA  149
      ||||||| |||| ||| |||||| ||| ||||||||| |||||| |||| 
seq2  AATCCAG-AGCA-TCT-GGAGCC-CAAAGAAAAAATC-AGATACCTGAA-  125

seq1  GAAGCTGAGAGAGACAGAACAGTGGGGAGCTGCAGAGTCTCAGCTTTCCT  199
        ||||||||||||||| ||||||||||||||||||||||||||||||  
seq2  -GAGCTGAGAGAGACAG-ACAGTGGGGAGCTGCAGAGTCTCAGCTTTC--  171

seq1  CCCTGTTGATGTCTGCCATGCCCTTAACATGCGGTGGCCTCTCCAGTCTT  249
       |||| ||||||||| ||||||  | |||||||||||||||||||||| |
seq2  TCCTG-TGATGTCTG-CATGCC--TTACATGCGGTGGCCTCTCCAGTC-T  216

seq1  TCCCAGCCTGAACCACCTGAATCCTGGTAGAAACTGGACAGAATGGTATG  299
      |||||| |||||||| ||||||||||||||||||||||||||||||||||
seq2  TCCCAG-CTGAACCA-CTGAATCCTGGTAGAAACTGGACAGAATGGTATG  264

seq1  TGCCAGAACAGGGTACAGAGTAAATAGAGGCAAAAGTGGAGAAAGAGGAA  349
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  TGCCAGAACAGGGTACAGAGTAAATAGAGGC-AAAGTGGAGAAAGAGGAA  313

seq1  AAGAGGAAAGAATCAGGAAGGTTGGCCAGAGACAATGAGCTGTGATGGCA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGGAAAGAATCAGGAAGGTTGGCCAGAGACAATGAGCTGTGATGGCA  363

seq1  CATGGAAGTTCTCCAGTCAGTCACAGAAAGGTGGCTTCAGGTTATCTGGA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGAAGTTCTCCAGTCAGTCACAGAAAGGTGGCTTCAGGTTATCTGGA  413

seq1  AGAACATGAAAGGCATGTTGAAGAATCTGTCAAACTGCAAACAGCTCTGC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACATGAAAGGCATGTTGAAGAATCTGTCAAACTGCAAACAGCTCTGC  463

seq1  AGGAAGTGAGCAGAGTGTGTAGCCCAGTAAGCCTCTTGGACAGCCTCACA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGTGAGCAGAGTGTGTAGCCCAGTAAGCCTCTTGGACAGCCTCACA  513

seq1  TGGAAGTGTGAGGTAGGAGGGTTTGATGGGAGGAGAAAGGCCTCTTGGCT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAGTGTGAGGTAGGAGGGTTTGATGGGAGGAGAAAGGCCTCTTGGCT  563

seq1  GAAGCAGGCAGGTGGGACCTCCCTTGTGTACAGCACAGTAAGTGTTAAGA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCAGGCAGGTGGGACCTCCCTTGTGTACAGCACAGTAAGTGTTAAGA  613

seq1  ACATGGACTTAGGAATGTTTGAAGATACCTCTTAAAAGTTGCACAGAAAT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGGACTTAGGAATGTTTGAAGATACCTCTTAAAAGTTGCACAGAAAT  663

seq1  GTGAATGCCAAGGGAAGAAAGTACACAAGCTGCATTATCTAAAGAACTAA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAATGCCAAGGGAAGAAAGTACACAAGCTGCATTATCTAAAGAACTAA  713

seq1  GAGAGGCTAGACCAGCAATTCAGCAGTCAAAACTATTTGGACCAGAGTTT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGGCTAGACCAGCAATTCAGCAGTCAAAACTATTTGGACCAGAGTTT  763

seq1  GATACCCAACATCCACAGGATGGCTCACAACCATCCATAACTCCAGTTCC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATACCCAACATCCACAGGATGGCTCACAACCATCCATAACTCCAGTTCC  813

seq1  AGGAGTTCTGACACCCCTTTCTATCCTCTTCTGGCACCAGGAATGCATGT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGTTCTGACACCCCTTTCTATCCTCTTCTGGCACCAGGAATGCATGT  863

seq1  GGTACACATTCATACCTGCAGGCAGAGCACCCATGCATATCAAATAAATC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTACACATTCATACCTGCAGGCAGAGCACCCATGCATATCAAATAAATC  913

seq1  AAATATTATTTTAAAGCTAAAAGATATTGCAACCTTGAACTACATAGAAT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATTATTTTAAAGCTAAAAGATATTGCAACCTTGAACTACATAGAAT  963

seq1  AGAAATCTGAAATGTGGAGGGAGCTAACATGGTAGTCCAAGGAAGGCAAA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATCTGAAATGTGGAGGGAGCTAACATGGTAGTCCAAGGAAGGCAAA  1013

seq1  ACCCAAGAGTCAGGTAACAGGATACCTGTTTGGGGTGGGGGGATGCGGGG  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAAGAGTCAGGTAACAGGATACCTGTTTGGGGTGGGGGGATGCGGGG  1063

seq1  AGAGGGTGGATTCATTGTATAAGAACATTTAAATTCTGACAGCAGCCCTG  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGGTGGATTCATTGTATAAGAACATTTAAATTCTGACAGCAGCCCTG  1113

seq1  AAAACAAGGAGGCAATGGTGTGATGCCTTCAGAATTCTAAGCAAGTTATT  1199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACAAGGAGGCAATGGTGTGATGCCTTCAGAATTCTAAGCAAGTTATT  1163

seq1  GTCCATATAGAATTC  1214
      |||||||||||||||
seq2  GTCCATATAGAATTC  1178

seq1: chr2_126273219_126274325
seq2: B6Ng01-156K20.g_68_1164

seq1  GAATTCCTTTAGAAGACAACATTTAAAATATATTTCCTAGCAGAATAGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTTAGAAGACAACATTTAAAATATATTTCCTAGCAGAATAGAA  50

seq1  AGAAATACAGGTCAGTATTAAATGATGAGTATAAATAGGCAAGTAACACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATACAGGTCAGTATTAAATGATGAGTATAAATAGGCAAGTAACACA  100

seq1  AAAAAAATAATAAATAAGAGCTAATAAATGTGTTCGAAAACACAATCACT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAATAATAAATAAGAGCTAATAAATGTGTTCGAAAACACAATCACT  150

seq1  AGAAATTGGGTGTGCCCATTTCTTAAATGAATGTAACCTGTTCCCTGCGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATTGGGTGTGCCCATTTCTTAAATGAATGTAACCTGTTCCCTGCGG  200

seq1  GCTGAGAATGACAACAATCACTCAAGTCAAATAGCTTTGACCACAGCAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAGAATGACAACAATCACTCAAGTCAAATAGCTTTGACCACAGCAGG  250

seq1  AAATCTGTATCCAAAACTCATGCCTACAATTCATTCCTTGGAGCAGCAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCTGTATCCAAAACTCATGCCTACAATTCATTCCTTGGAGCAGCAGA  300

seq1  ACGGTCAGCTCTTAGCTTATCTACTATGGAGGTAAAATCCTTTAAGTACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGGTCAGCTCTTAGCTTATCTACTATGGAGGTAAAATCCTTTAAGTACA  350

seq1  GCTTTATTACAATGAACTCCAATGTCCAAAAAGTGTTCTTATTTTGTGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTATTACAATGAACTCCAATGTCCAAAAAGTGTTCTTATTTTGTGTT  400

seq1  TGTACCACAGTAAGAGCCAAGATTTTAAGCTCTACTAAAAACAAAACAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACCACAGTAAGAGCCAAGATTTTAAGCTCTACTAAAAACAAAACAAG  450

seq1  CAAACAAATAAAAAGACTTTATCTATTTATGTTCATTTAAAAAACTAATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACAAATAAAAAGACTTTATCTATTTATGTTCATTTAAAAAACTAATA  500

seq1  AAGATATATTATTTTAAAATATCATACAGTTAATATATTTGAAGTTATTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATATATTATTTTAAAATATCATACAGTTAATATATTTGAAGTTATTT  550

seq1  AAAATTTATATTGAGAAAATGTGTGTATTTTCAGTATTGCTGTAGACAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTTATATTGAGAAAATGTGTGTATTTTCAGTATTGCTGTAGACAAG  600

seq1  CATCTACATAAGACTGTTCAATTGATTGTTGTTTTATATCAAACAACTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTACATAAGACTGTTCAATTGATTGTTGTTTTATATCAAACAACTTT  650

seq1  CATAATACTCATTTTTATTGTTAAAATACTTTATAAATTTTAAAGAGTAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAATACTCATTTTTATTGTTAAAATACTTTATAAATTTTAAAGAGTAT  700

seq1  GATAAAATGAAAGGTATTGCAGGTTTTGAAGAGGGGAGGCTCTCAGGAAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAAAATGAAAGGTATTGCAGGTTTTGAAGAGGGGAGGCTCTCAGGAAG  750

seq1  GAGTTGGGGTACAAAAGGGAAAGAAGAATGTGATGTCAATCTATTTACTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTGGGGTACAAAAGGGAAAGAAGAATGTGATGTCAATCTATTTACTC  800

seq1  AAAATGTGTTGTTAAATGTTCAGATAAATTGAAATTATGTATC-TTTTCT  849
      ||||||||||||||||||||||||||||||||||||||||||| |||| |
seq2  AAAATGTGTTGTTAAATGTTCAGATAAATTGAAATTATGTATCTTTTTTT  850

seq1  CATCATAATGCAATAAAACTAAAATTTGAAAAAAACAAAGAAAGAAATGG  899
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  CATCATAATGCAATAAAACTAAAATTTG-AAAAAACAAAGAAAGAAATGG  899

seq1  GGTGTGCAAGGTGGGTCTCCACACTCAACAGCCAGATGTTTAAGAAGCTG  949
      ||||||| ||||||||||||||| || |||||||||||||| || |||||
seq2  GGTGTGC-AGGTGGGTCTCCACATTC-ACAGCCAGATGTTT-AGGAGCTG  946

seq1  ATACTCAAAGTCACAGTGATGCTGTTGGAAAACAGCATTCATCAGTTCAG  999
      |||||||||||||||||||||||||  | |||||||||||||||||||||
seq2  ATACTCAAAGTCACAGTGATGCTGT--GGAAACAGCATTCATCAGTTCAG  994

seq1  ACATGAGAGTGAGTTCACATAAACTTCCTGGAAATGAATTCAGTAATAAA  1049
      |||||||||||||||||||||||||| || ||||||| |||||| |||| 
seq2  ACATGAGAGTGAGTTCACATAAACTT-CTTGAAATGATTTCAGT-ATAAT  1042

seq1  TTTTAATAATGCCTCTGTTCTTCCTTAAAGAGAC-TTCGCTTTGCAACAG  1098
      |||||   ||||||||||||||| ||  |||||| |||||||||| |  |
seq2  TTTTA--TATGCCTCTGTTCTTCTTT--AGAGACTTTCGCTTTGCCAACG  1088

seq1  AATCCATTA  1107
      |||||||||
seq2  AATCCATTA  1097