BAC Information

Click to search

BAC

Clone NameB6Ng01-157I14
Chromosome2 (Build37)
Map Location 114,035,396 - 114,188,760
singlet/doubletdoublet
Overlap genenone
Upstream gene4930563P21Rik, Fmn1, Grem1, LOC100043520, Scg5, Arhgap11a, LOC100043526, Gja9, A530058N18Rik, Actc1, Aqr, Zfp770
Downstream geneAtpbd4, LOC100043219, LOC100043222
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-157I14.bB6Ng01-157I14.g
ACCDH951744DH951745
length1,123369
definitionDH951744|Mus musculus domesticus DNA, BAC clone: B6Ng01-157I14, 5' end.DH951745|Mus musculus domesticus DNA, BAC clone: B6Ng01-157I14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(114,187,629 - 114,188,760)(114,035,396 - 114,035,770)
sequence
gaattctctggacgatgaacaattagctgtaaagtaagaaggaaaacaat
ctcccctcccttgctttagctcataatgcttatcacaacagtagacacct
aactgggacacgatacatagctttccatcaggacagcttccttctgtgat
gatcagtcagataaagatttttgagcctgtgatacaactttgtttctttt
agaaaaagcttaaaacacttcatatttgtccacacaataaagttagattt
cagagacagaatagccacatagccctctgaggtaaatggtactatcatgc
tcttgatgcacagggtagaataaatgactgatttcatatgcaagtttctt
ggtttacttacaactttctgctaagactctgaagcaaaggatttcagcaa
ttacatttgttgtgtgtgtgtgtacatttttcagaaagcatatgttagtg
gggctattaagcaattagtttcatgcatatagatagttcattttgcacca
aaccatatgatgtgattggaatttatagaaaaccatctttcttgccagaa
atgaagtgagttaattctctagtttggataaatgtggctctatggctgca
atctgtagccttaaaaattaggagcctagtattcatgttctatagcttat
aaaagtgcataatataaaaagttctgtgttatgaaattggatacacagta
cctggttcatattgcatgttcactaaatgtattttagattgcaataaaat
gatgccaactaagatcattcatatatatgaggactatgctcctgtcagct
ttgcatagaagaatttttagtagtctatgcaaaaggaaagtacagtccga
gacagagttggcaatgttgattggataaaatcaagctggctgctcaggag
aagcccagctatttctagaaacttaatcactgtttttgaatggaggcaag
gacgagactgaaatgaaagagaaaccggaagccacctcacatcttcacat
ttttttcttacatcagagcagcatgtgacttttctcttctaggaggctca
agtagctcagaaaacaacttatttgagggtgacatcctaactgcagatgg
tgtcttataagaacatcagtaaa
aattaatctcaaggaaagcatctgcagcttagagataaatacattcttaa
tttctgtacactagaaatagttgttgtccacattccaactgctacctctc
taattttaggtggaatgtggaaattctcttctctttattacctaaatatg
tctatataatatttcttatggcatgtagtattcactggtagttctaataa
atccaaggtcagagtctaaccaggaagggatattattgcacttagagaaa
gaggctttaaataattcagtaatgagtataattgttcaggtcattatctt
aggctgggttcacagaaattcttaaatggaacggtgtgtcttcaaaagag
caagcaagaaaaacaaaac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_114187629_114188760
seq2: B6Ng01-157I14.b_45_1167 (reverse)

seq1  TTTACTGATGTTTCTAATAAGGACCACCATTCTGCAGTTTTAGGATGTCA  50
      |||||||||| |||| |||||   ||||| |||||||  |||||||||||
seq2  TTTACTGATG-TTCTTATAAG--ACACCA-TCTGCAG--TTAGGATGTCA  44

seq1  CCCTCATATAAGTTGTTTTTCTGAGCTACTTTTGGGCCTTCCTAGGAGAG  100
      |||||| |||||||| |||||||||||||  ||| ||| |||||| ||||
seq2  CCCTCAAATAAGTTG-TTTTCTGAGCTAC--TTGAGCC-TCCTAGAAGAG  90

seq1  -ATAGTCACATGCTGCTCTGATGTAGGAAAAAAATGTGAAGATGTGAGGT  149
       | |||||||||||||||||||||| ||||||||||||||||||||||||
seq2  AAAAGTCACATGCTGCTCTGATGTAAGAAAAAAATGTGAAGATGTGAGGT  140

seq1  GGCTTCCGGTTTCTCTTTCATTTCAGTCTCGTCCTTGCCTCCATTCAAAA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTCCGGTTTCTCTTTCATTTCAGTCTCGTCCTTGCCTCCATTCAAAA  190

seq1  ACAGTGATTAAGTTTCTAGAAATAGCTGGGCTTCTCCTGAGCAGCCAGCT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTGATTAAGTTTCTAGAAATAGCTGGGCTTCTCCTGAGCAGCCAGCT  240

seq1  TGATTTTATCCAATCAACATTGCCAACTCTGTCTCGGACTGTACTTTCCT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTTATCCAATCAACATTGCCAACTCTGTCTCGGACTGTACTTTCCT  290

seq1  TTTGCATAGACTACTAAAAATTCTTCTATGCAAAGCTGACAGGAGCATAG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCATAGACTACTAAAAATTCTTCTATGCAAAGCTGACAGGAGCATAG  340

seq1  TCCTCATATATATGAATGATCTTAGTTGGCATCATTTTATTGCAATCTAA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCATATATATGAATGATCTTAGTTGGCATCATTTTATTGCAATCTAA  390

seq1  AATACATTTAGTGAACATGCAATATGAACCAGGTACTGTGTATCCAATTT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACATTTAGTGAACATGCAATATGAACCAGGTACTGTGTATCCAATTT  440

seq1  CATAACACAGAACTTTTTATATTATGCACTTTTATAAGCTATAGAACATG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAACACAGAACTTTTTATATTATGCACTTTTATAAGCTATAGAACATG  490

seq1  AATACTAGGCTCCTAATTTTTAAGGCTACAGATTGCAGCCATAGAGCCAC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACTAGGCTCCTAATTTTTAAGGCTACAGATTGCAGCCATAGAGCCAC  540

seq1  ATTTATCCAAACTAGAGAATTAACTCACTTCATTTCTGGCAAGAAAGATG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATCCAAACTAGAGAATTAACTCACTTCATTTCTGGCAAGAAAGATG  590

seq1  GTTTTCTATAAATTCCAATCACATCATATGGTTTGGTGCAAAATGAACTA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTCTATAAATTCCAATCACATCATATGGTTTGGTGCAAAATGAACTA  640

seq1  TCTATATGCATGAAACTAATTGCTTAATAGCCCCACTAACATATGCTTTC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATATGCATGAAACTAATTGCTTAATAGCCCCACTAACATATGCTTTC  690

seq1  TGAAAAATGTACACACACACACAACAAATGTAATTGCTGAAATCCTTTGC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAAATGTACACACACACACAACAAATGTAATTGCTGAAATCCTTTGC  740

seq1  TTCAGAGTCTTAGCAGAAAGTTGTAAGTAAACCAAGAAACTTGCATATGA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGAGTCTTAGCAGAAAGTTGTAAGTAAACCAAGAAACTTGCATATGA  790

seq1  AATCAGTCATTTATTCTACCCTGTGCATCAAGAGCATGATAGTACCATTT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAGTCATTTATTCTACCCTGTGCATCAAGAGCATGATAGTACCATTT  840

seq1  ACCTCAGAGGGCTATGTGGCTATTCTGTCTCTGAAATCTAACTTTATTGT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCAGAGGGCTATGTGGCTATTCTGTCTCTGAAATCTAACTTTATTGT  890

seq1  GTGGACAAATATGAAGTGTTTTAAGCTTTTTCTAAAAGAAACAAAGTTGT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGACAAATATGAAGTGTTTTAAGCTTTTTCTAAAAGAAACAAAGTTGT  940

seq1  ATCACAGGCTCAAAAATCTTTATCTGACTGATCATCACAGAAGGAAGCTG  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACAGGCTCAAAAATCTTTATCTGACTGATCATCACAGAAGGAAGCTG  990

seq1  TCCTGATGGAAAGCTATGTATCGTGTCCCAGTTAGGTGTCTACTGTTGTG  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGATGGAAAGCTATGTATCGTGTCCCAGTTAGGTGTCTACTGTTGTG  1040

seq1  ATAAGCATTATGAGCTAAAGCAAGGGAGGGGAGATTGTTTTCCTTCTTAC  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGCATTATGAGCTAAAGCAAGGGAGGGGAGATTGTTTTCCTTCTTAC  1090

seq1  TTTACAGCTAATTGTTCATCGTCCAGAGAATTC  1132
      |||||||||||||||||||||||||||||||||
seq2  TTTACAGCTAATTGTTCATCGTCCAGAGAATTC  1123

seq1: chr2_114035396_114035770
seq2: B6Ng01-157I14.g_67_441

seq1  GAATTCAATTAATCTCAAGGAAAGCATCTGCAGCTTAGAGATAAATACAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATTAATCTCAAGGAAAGCATCTGCAGCTTAGAGATAAATACAT  50

seq1  TCTTAATTTCTGTACACTAGAAATAGTTGTTGTCCACATTCCAACTGCTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAATTTCTGTACACTAGAAATAGTTGTTGTCCACATTCCAACTGCTA  100

seq1  CCTCTCTAATTTTAGGTGGAATGTGGAAATTCTCTTCTCTTTATTACCTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTCTAATTTTAGGTGGAATGTGGAAATTCTCTTCTCTTTATTACCTA  150

seq1  AATATGTCTATATAATATTTCTTATGGCATGTAGTATTCACTGGTAGTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATGTCTATATAATATTTCTTATGGCATGTAGTATTCACTGGTAGTTC  200

seq1  TAATAAATCCAAGGTCAGAGTCTAACCAGGAAGGGATATTATTGCACTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAAATCCAAGGTCAGAGTCTAACCAGGAAGGGATATTATTGCACTTA  250

seq1  GAGAAAGAGGCTTTAAATAATTCAGTAATGAGTAGAATTGTTCAGGTCAT  300
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  GAGAAAGAGGCTTTAAATAATTCAGTAATGAGTATAATTGTTCAGGTCAT  300

seq1  AATCTTAGGCTGGGTTCACAGAAATTCTTAAATGGAACGGTGTGTCTTCA  350
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTTAGGCTGGGTTCACAGAAATTCTTAAATGGAACGGTGTGTCTTCA  350

seq1  AAAGAGCAAGCAAGAAAAACAAAAC  375
      |||||||||||||||||||||||||
seq2  AAAGAGCAAGCAAGAAAAACAAAAC  375