BAC Information

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BAC

Clone NameB6Ng01-158N06
Chromosome2 (Build37)
Map Location 92,965,270 - 93,101,483
singlet/doubletdoublet
Overlap geneTrp53i11, C230071H18Rik, Tspan18
Upstream genePhf21a, Gyltl1b, Pex16, 1700029I15Rik, Mapk8ip1, Cry2, Slc35c1, LOC100042775, LOC100043205, Chst1, Syt13, LOC100042784
Downstream geneLOC100042789, LOC639658, Cd82, Alx4, Ext2, 2610203E10Rik, Gm1967, Gm1335, LOC620695, Alkbh3, Hsd17b12, E530001K10Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-158N06.bB6Ng01-158N06.g
ACCDH952673DH952674
length1,0601,070
definitionDH952673|Mus musculus domesticus DNA, BAC clone: B6Ng01-158N06, 5' end.DH952674|Mus musculus domesticus DNA, BAC clone: B6Ng01-158N06, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(92,965,270 - 92,966,353)(93,100,393 - 93,101,483)
sequence
gaattcatcttgaaagtggtggtttagtagggttgtgaagattacacaaa
atgagcgtttggggtcagcccagggacccaggctctgcagccatgtagct
aaggttaagagtcctaggtgcagctgggtggctttgggtaggtgctgccc
ctctctgagcctctcttcatttgtatgcacagaactgtccggggtgagat
gaggggccaccaagaagcaggttcagctgcaggcagtgctagtaagtgac
gagctactgaggaagagcatccagggcaggctgggcatggaacaacagca
gcctggaggagggctctgcacttgtgaggactccaggccaagagttctca
gtcctgactgcacattggcaccgcatggaggtcttgtccaatgcccacat
ccaatggtctacaggagaccaggcatccagtcagatttctaaatgcccag
gaaatactagggtcactgagttagatgagttagagaggtgttctaactaa
gcaggccaagcccttcagaggaggggatgtctgagctgaggtccaggtgt
tactcaggaatagacagcagcagggttcaaacagagattagtgtgggtac
caagggttcaaacagataagagagttggtgccaaggtcctggggcaggca
tgagtttggtttgtgtggaaagcagcaggcagcctggggtgggagaaagg
tgtgtaattagctaagggtccaagccccaggagaacaagaataggagact
gcatatccctctggccagaaaggactaaattagtccttggtgctgccaga
gagtaccccgccttttgctcacagcaacataagtccttcaaatgtcttga
gttggagacataagatggctcctaagggaatacctagtctctcggacagg
tcactgactattaaggatcctggggacagtgagtgggatcattacagcgc
cagttaagagagttgatcagatgggcaactgtgcctcctggaacatcaca
gacgtgggaggttgctggctgcagggaaagcacaggtaccaggaatgtac
ctctgctagg
gaattctcagcagcctcaggtggaagcaaggcaagcagggcgagctgtcc
tgttgactgaggtgggtgagcagttaggagcctcctgctagttaatggcc
tcgtgcaagttcatctggtgatcgaatggatcctctgtcacctgcagcct
gtgttctcacccaaggccgtcatgggcttgacagcaggccttgtgttaca
ggccaggcaccatactgcttctcaggcagggccgtggtgtccttccaccc
cctgccccccacaaacctgccaacacctagaaagcatggatccctgtatg
ctgctcctatgacagccctatcttctgctccctgctccttgggattcatc
tttcttctttggtccttctgatgagccttagagccctgtactggctagtt
ttgtgtcaacttgacacagctggagttatcacagagaaaggagcttcagc
tggggaaatgcctccatgagcggtagatgtaaggcattttctcattagtg
atcaagggggagggccccttgtgggtgggaccatctctgggctggtagtc
ttgggttctataagagagcaggctgagcaagccaggggaagcaagccagt
aagaaacaaccctccatggccactgcatcagctcctgcttcctgacctgt
ttgagttccagtcctgacttccttggtgatgaacatcaatgtggaagtgt
aagccgaataaatcctttcctccccaacttgcttcttggtcatgatattt
gtgcaggaatagaaaccctgactaagacaagtcctgaatgtttatgtaga
ccaggaggacaacatgccaggatcagccctaaagactctgcaaggagcct
gggcaagtggttggcagagaggatagaagaagcctgcactaaaaggatgg
tgtttatggccatgatgctggtgtctcatgggagaatggtgggtcctgaa
tgtgccacagcaaagaatgactgattttgttcccagtctgagtacaagtc
agtggcagttcttcctctccttcttcttcaatgcccttcttcccttccct
ctaattcttctctcccccct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_92965270_92966353
seq2: B6Ng01-158N06.b_46_1105

seq1  GAATTCATCTTGAAAGTGGTGGTTTAGTAGGGTTGTGAAGATTACACAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATCTTGAAAGTGGTGGTTTAGTAGGGTTGTGAAGATTACACAAA  50

seq1  ATGAGCGTTTGGGGTCAGCCCAGGGACCCAGGCTCTGCAGCCATGTAGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGCGTTTGGGGTCAGCCCAGGGACCCAGGCTCTGCAGCCATGTAGCT  100

seq1  AAGGTTAAGAGTCCTAGGTGCAGCTGGGTGGCTTTGGGTAGGTGCTGCCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTTAAGAGTCCTAGGTGCAGCTGGGTGGCTTTGGGTAGGTGCTGCCC  150

seq1  CTCTCTGAGCCTCTCTTCATTTGTATGCACAGAACTGTCCGGGGTGAGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTGAGCCTCTCTTCATTTGTATGCACAGAACTGTCCGGGGTGAGAT  200

seq1  GAGGGGCCACCAAGAAGCAGGTTCAGCTGCAGGCAGTGCTAGTAAGTGAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGGCCACCAAGAAGCAGGTTCAGCTGCAGGCAGTGCTAGTAAGTGAC  250

seq1  GAGCTACTGAGGAAGAGCATCCAGGGCAGGCTGGGCATGGAACAACAGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTACTGAGGAAGAGCATCCAGGGCAGGCTGGGCATGGAACAACAGCA  300

seq1  GCCTGGAGGAGGGCTCTGCACTTGTGAGGACTCCAGGCCAAGAGTTCTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGGAGGAGGGCTCTGCACTTGTGAGGACTCCAGGCCAAGAGTTCTCA  350

seq1  GTCCTGACTGCACATTGGCACCGCATGGAGGTCTTGTCCAATGCCCACAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTGACTGCACATTGGCACCGCATGGAGGTCTTGTCCAATGCCCACAT  400

seq1  CCAATGGTCTACAGGAGACCAGGCATCCAGTCAGATTTCTAAATGCCCAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATGGTCTACAGGAGACCAGGCATCCAGTCAGATTTCTAAATGCCCAG  450

seq1  GAAATACTAGGGTCACTGAGTTAGATGAGTTAGAGAGGTGTTCTAACTAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATACTAGGGTCACTGAGTTAGATGAGTTAGAGAGGTGTTCTAACTAA  500

seq1  GCAGGCCAAGCCCTTCAGAGGAGGGGATGTCTGAGCTGAGGTCCAGGTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGCCAAGCCCTTCAGAGGAGGGGATGTCTGAGCTGAGGTCCAGGTGT  550

seq1  TACTCAGGAATAGACAGCAGCAGGGTTCAAACAGAGATTAGTGTGGGTAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCAGGAATAGACAGCAGCAGGGTTCAAACAGAGATTAGTGTGGGTAC  600

seq1  CAAGGGTTCAAACAGATAAGAGAGTTGGTGCCAAGGTCCTGGGGCAGGCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGGTTCAAACAGATAAGAGAGTTGGTGCCAAGGTCCTGGGGCAGGCA  650

seq1  TGAGTTTGGTTTGTGTGGAAAGCAGCAGGCAGCCTGGGGTGGGAGAAAGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTTTGGTTTGTGTGGAAAGCAGCAGGCAGCCTGGGGTGGGAGAAAGG  700

seq1  TGTGTAATTAGCTAAGGGTCCAAGCCCCAGGAGAACAAGAATAGGAGACT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTAATTAGCTAAGGGTCCAAGCCCCAGGAGAACAAGAATAGGAGACT  750

seq1  GCATATCCCTCTGGCCAG-AAGGACTAAATTAGTCCTTGGCACCCCCAGA  799
      |||||||||||||||||| |||||||||||||||||||||  |  |||||
seq2  GCATATCCCTCTGGCCAGAAAGGACTAAATTAGTCCTTGGTGCTGCCAGA  800

seq1  GAGTACCCCGCCTTTTGCTCACAGCAACATAAGTCCTTCAAATGTCTTTG  849
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  GAGTACCCCGCCTTTTGCTCACAGCAACATAAGTCCTTCAAATGTC-TTG  849

seq1  AGTTGGAGAACATAAGGATGGCTCCTAAGGGAATACCTAGTCTCTCGGAC  899
      |||||||| |||||| ||||||||||||||||||||||||||||||||||
seq2  AGTTGGAG-ACATAA-GATGGCTCCTAAGGGAATACCTAGTCTCTCGGAC  897

seq1  AGGTCACTGACTAATTAAGGATCCTGGGGACAGTGAAGTGGGAACCATTA  949
      |||||||||||| |||||||||||||||||||||| |||||| | |||||
seq2  AGGTCACTGACT-ATTAAGGATCCTGGGGACAGTG-AGTGGG-ATCATTA  944

seq1  CAGCGACCAGTATAAGAGGAAGTTGACCAAGATGGGCCAACTGTG-CTCC  998
      ||||| ||||| ||||||  |||||| | ||||||| |||||||| ||||
seq2  CAGCG-CCAGT-TAAGAG--AGTTGATC-AGATGGG-CAACTGTGCCTCC  988

seq1  TGGGACCATCACAAAGACCGTGGGGAGGTTGGCTGGCTGGCAGGGAGAGG  1048
      | ||| ||||||| |   ||| |||||||| ||||||| ||||||| | |
seq2  T-GGAACATCACAGA---CGT-GGGAGGTT-GCTGGCT-GCAGGGA-AAG  1030

seq1  CAGCAGGCTACCAGGAAAATGGTACCTCCTGCTAGG  1084
      || |||| |||||||||    |||||| ||||||||
seq2  CA-CAGG-TACCAGGAA---TGTACCT-CTGCTAGG  1060

seq1: chr2_93100393_93101483
seq2: B6Ng01-158N06.g_67_1136 (reverse)

seq1  AGGGGGGAGAAGAAGAAAATGAGGAAGGGAAAGGGGAAGGAAGGGCAGAT  50
      ||||||||| |||||  ||| ||  ||||||  ||||| ||||||||  |
seq2  AGGGGGGAG-AGAAG--AATTAG--AGGGAA--GGGAA-GAAGGGCA-TT  41

seq1  GAAAGGAAGGAAGGAAAGAAGGAAAGAAACTGCCAACTGACCTGTACTCA  100
      |||  ||| |||||| || | |     ||||||| |||||| ||||||||
seq2  GAA--GAA-GAAGGAGAGGAAG-----AACTGCC-ACTGACTTGTACTCA  82

seq1  GACTGGGGACAAAAATCAGTCA-TCTTTGCTGTGGCCACACTCAGGACCC  149
      ||||||| || ||||||||||| |||||||||||| |||| |||||||||
seq2  GACTGGGAAC-AAAATCAGTCATTCTTTGCTGTGG-CACATTCAGGACCC  130

seq1  ACCATCTTCCCATGAGACACCAGCATCCTGGCCATAAACACCATCCTTTT  199
      |||||  |||||||||||||||||||| ||||||||||||||||||||||
seq2  ACCATTCTCCCATGAGACACCAGCATCATGGCCATAAACACCATCCTTTT  180

seq1  AGTGCCAGGCTTCTTCCATCCTCTCTGCCAACCACCTTGCCCAGGCTCCT  249
      |||| ||||||||||| ||||||||||||||||| |||||||||||||||
seq2  AGTG-CAGGCTTCTTCTATCCTCTCTGCCAACCA-CTTGCCCAGGCTCCT  228

seq1  TGCAGAGTCTTTAGGGCCTGATCCTGGCATGTTGTCCTCCTGGTCTACAT  299
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  TGCAGAGTCTTTAGGG-CTGATCCTGGCATGTTGTCCTCCTGGTCTACAT  277

seq1  AGACATTCAGG-CTTGTCTTAGTCAGGGTTTCTATTCCTGCACAAATATC  348
      | ||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  AAACATTCAGGACTTGTCTTAGTCAGGGTTTCTATTCCTGCACAAATATC  327

seq1  ATGACCAAGAAGCAAGTTGGGGAGGAAAGGATTTATTCGGCTTACACTTC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACCAAGAAGCAAGTTGGGGAGGAAAGGATTTATTCGGCTTACACTTC  377

seq1  CACATTGATGTTCATCACCAAGGAAGTCAGGACTGGAACTCAAACAGGTC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATTGATGTTCATCACCAAGGAAGTCAGGACTGGAACTCAAACAGGTC  427

seq1  AGGAAGCAGGAGCTGATGCAGTGGCCATGGAGGGTTGTTTCTTACTGGCT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGCAGGAGCTGATGCAGTGGCCATGGAGGGTTGTTTCTTACTGGCT  477

seq1  TGCTTCCCCTGGCTTGCTCAGCCTGCTCTCTTATAGAACCCAAGACTACC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTCCCCTGGCTTGCTCAGCCTGCTCTCTTATAGAACCCAAGACTACC  527

seq1  AGCCCAGAGATGGTCCCACCCACAAGGGGCCCTCCCCCTTGATCACTAAT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCAGAGATGGTCCCACCCACAAGGGGCCCTCCCCCTTGATCACTAAT  577

seq1  GAGAAAATGCCTTACATCTAGATCTCATGGAGGCATTTCCCCAGCTGAAG  648
      ||||||||||||||||||||   |||||||||||||||||||||||||||
seq2  GAGAAAATGCCTTACATCTACCGCTCATGGAGGCATTTCCCCAGCTGAAG  627

seq1  CTCCTTTCTCTGTGATAACTCCAGCTGTGTCAAGTTGACACAAAACTAGC  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTTTCTCTGTGATAACTCCAGCTGTGTCAAGTTGACACAAAACTAGC  677

seq1  CAGTACAGGGCTCTAAGGCTCATCAGAAGGACCAAAGAAGAAAGATGAAT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTACAGGGCTCTAAGGCTCATCAGAAGGACCAAAGAAGAAAGATGAAT  727

seq1  CCCAAGGAGCAGGGAGCAGAAGATAGGGCTGTCATAGGAGCAGCATACAG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAAGGAGCAGGGAGCAGAAGATAGGGCTGTCATAGGAGCAGCATACAG  777

seq1  GGATCCATGCTTTCTAGGTGTTGGCAGGTTTGTGGGGGGCAGGGGGTGGA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCCATGCTTTCTAGGTGTTGGCAGGTTTGTGGGGGGCAGGGGGTGGA  827

seq1  AGGACACCACGGCCCTGCCTGAGAAGCAGTATGGTGCCTGGCCTGTAACA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACACCACGGCCCTGCCTGAGAAGCAGTATGGTGCCTGGCCTGTAACA  877

seq1  CAAGGCCTGCTGTCAAGCCCATGACGGCCTTGGGTGAGAACACAGGCTGC  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGCCTGCTGTCAAGCCCATGACGGCCTTGGGTGAGAACACAGGCTGC  927

seq1  AGGTGACAGAGGATCCATTCGATCACCAGATGAACTTGCACGAGGCCATT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGACAGAGGATCCATTCGATCACCAGATGAACTTGCACGAGGCCATT  977

seq1  AACTAGCAGGAGGCTCCTAACTGCTCACCCACCTCAGTCAACAGGACAGC  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTAGCAGGAGGCTCCTAACTGCTCACCCACCTCAGTCAACAGGACAGC  1027

seq1  TCGCCCTGCTTGCCTTGCTTCCACCTGAGGCTGCTGAGAATTC  1091
      |||||||||||||||||||||||||||||||||||||||||||
seq2  TCGCCCTGCTTGCCTTGCTTCCACCTGAGGCTGCTGAGAATTC  1070