BAC Information

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BAC

Clone NameB6Ng01-159F04
Chromosome2 (Build37)
Map Location 142,776,691 - 142,777,698
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC668913, LOC668914, Kif16b
Downstream geneSnrpb2, Otor, LOC668915, LOC668916, Pcsk2, Bfsp1, LOC100043799, LOC100043534, Dstn, Rrbp1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-159F04.bB6Ng01-159F04.g
ACCDH953019DH953020
length1,0081,122
definitionDH953019|Mus musculus domesticus DNA, BAC clone: B6Ng01-159F04, 5' end.DH953020|Mus musculus domesticus DNA, BAC clone: B6Ng01-159F04, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttgttcagttctgatgcccatttttaatggggttatttgattt
tctgaagtccaccttcttgagttctttatatatgttggatattagtcccc
tatctgatttaggataggtaaagatcctttcccaatctgttggtggtctt
tttgtcttattgacagtgtctttgccttgcagaaactttggagtttcatt
aggtcccatttgtcaattttcgatcttacagtacaagccattgctgttct
tttcaggaatttttcccctgtgcccatatcttcaaggcttttacccactt
tctcctctataagtttcagtgtctctggttttatgtgaagttccttgctc
cacttagatttgaccttagtacaaggagataagtatggatcgattcgcat
tcttctacatgataacaaccagttgtgccagcaccaattgttgaaaatgc
tgtctttcttccactggatggttttagctcccttgtcgaagatcaagtga
ccataggtgtgtgggttcatttctgggtcttcaattctattccattggtc
tacttgtctgtctctataccagtaccatgcagtttttatcacaattgctc
tgtagtaaagctttaggtctggcatggtgattccaccagaagttctttta
tccttgagaagactttttgctatcccaggttttttgttattccagacgaa
tttgcaaattgctccttccaattcgttgaagaattgagttggaattttga
tggggattgcattgaatctgtagattgcttttggcaagatagccattttt
acaatgttgatcctgccaatccatgagcatgggagatctttccatcttct
gagatcttctttaatttctttcttcagagatttgaagttttattatacag
atctttcacttccttagttagagtcacgccagatatttatatatttgtga
ctattgagaaggtgtgtttccctaatttctttctcagcctgttaatcttg
tgtagaga
gaattctttgtttagctctatacaccattttttaagagggttatttggtt
ctctggagtctaacttcttgagttctttatatatattggatattagcctc
ctataggatttaagtttggtaaagatcttttcccagtcttttggttgcct
tttagtttattgacagtgtcctttgccttacagaatctttgcagttttat
gaggtcccatttgtcaattcttgatcttacattggtgttctgttcaggaa
ttgtcctcctgtgcccatatgtttgaggctcttcccaactttcacctcta
taagtttcagtgtctctggttttatttggaggtccttgatccacttggac
ttgagctttgtacaggagttaagaatgtatcggttcaattcacattcttc
tacatgctaacagccagttgagctagcaccatttttgaaaatgctgtctt
ttttccactggatggttttagctactttgtcaaagatcaagtgaccacag
atgtgtgggttcattcctgggtcttcacttctattccattgatctacctg
cctgccactgtagaaataccatacagtttttatcacaattgctctgtact
acaacttgaggtcagaaatcgtgattctgccaggagatcttttattgttg
agaatagttttcactatcctggctgttttgttattccaaatgaatttgca
aattgctctttctaactctatgaagaattgagttggaattttgatgggga
ttgaattgaatctgtaggctgcttttagcaagatggccatttttactata
taaatcttgccaatccattagcatgggaaatctttcaatcttctgagatc
tttgatttctttcttcagagacttgaagtcttgaagtcttcttgaaggat
cttatcatacagatcttcacttgcttagtcacacaaggtattttatatat
tttgtgactatgtgattggtgttgtttccctaattcctctctcagcctgt
ctatctttttgtgaggaaagcacctgatttggagttaattttatccttct
atttccgaatttttatcagttaaggagtctcggtgaattttgggagtccc
tttagtatcatactaatatact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_142776691_142777698
seq2: B6Ng01-159F04.b_51_596 (reverse)

seq1  AATGGAATAGAATTGAAGACCCAGAAATGAACCCACACACCTATGGTCAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGAATAGAATTGAAGACCCAGAAATGAACCCACACACCTATGGTCAC  50

seq1  TTGATCTTCGACAAGGGAGCTAAAACCATCCAGAGGAAGAAAGACAGCAT  100
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  TTGATCTTCGACAAGGGAGCTAAAACCATCCAGTGGAAGAAAGACAGCAT  100

seq1  TTTCAACAATTGGTGCTGGCACAACTGGTTGTTATCATGTAGAAGAATGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  TTTCAACAATTGGTGCTGGCACAACTGGTTGTTATCATGTAGAAGAATGC  150

seq1  GAATCGATCCATACTTATCTCCTTGTACTAAGGTCAAATCTAAGTGGATC  200
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  GAATCGATCCATACTTATCTCCTTGTACTAAGGTCAAATCTAAGTGGAGC  200

seq1  AAGGAACTTCACATAAAACCAGAGACACTGAAACTTATAGAGGAGAAAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAACTTCACATAAAACCAGAGACACTGAAACTTATAGAGGAGAAAGT  250

seq1  GGGGAAAAGCCTTGAAGATATGGGCACAGGGGACAAATTCCTGAACAGAA  300
      ||| ||||||||||||||||||||||||||||| ||||||||||| ||||
seq2  GGGTAAAAGCCTTGAAGATATGGGCACAGGGGAAAAATTCCTGAAAAGAA  300

seq1  CAGCAATGGCTTGTGCTGTAAGATCGAGAATTGACAAATGGGACCTAATG  350
      |||||||||||||| |||||||||||| ||||||||||||||||||||||
seq2  CAGCAATGGCTTGTACTGTAAGATCGAAAATTGACAAATGGGACCTAATG  350

seq1  AAACTCCAAAGTTTCTGCAAGGCAAAAGACACCGTCAATAAGACAAAAAG  400
      ||||||||||||||||||||||| |||||||| |||||||||||||||||
seq2  AAACTCCAAAGTTTCTGCAAGGC-AAAGACACTGTCAATAAGACAAAAAG  399

seq1  ACCACCAACAGATTGGGAAAGGATCTTTACCTATCCTAAATCAGATAGGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACCAACAGATTGGGAAAGGATCTTTACCTATCCTAAATCAGATAGGG  449

seq1  GACTAATATCCAACATATATAAAGAACTCAAGAAGGTGGACTTCAGAAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTAATATCCAACATATATAAAGAACTCAAGAAGGTGGACTTCAGAAAA  499

seq1  TCAAATAACCCCATTAAAAAATGGGGCTCACAAAACCATCCAGTGGAAGA  550
      ||||||||||||||| |||||||||  ||| ||            ||| |
seq2  TCAAATAACCCCATT-AAAAATGGGCATCAGAA----------CTGAACA  538

seq1  AAGACAGCATTTTCAACAATTGGTGCTGGCACAACTGGTTGTTATCATGT  600
      ||||    |||                                       
seq2  AAGA----ATTC--------------------------------------  546

seq1  AGAAGAATGCGAATCGATCCATACTTATCTCCTTGTACTAAGGTCAAATC  650
                                                        
seq2  --------------------------------------------------  546

seq1  TAAGTGGATCAAGGAACTTCACATAAAACCAGAGACACTGAAACTTATAG  700
                                                        
seq2  --------------------------------------------------  546

seq1  AGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGGCACAGGGGAAAAATTC  750
                                                        
seq2  --------------------------------------------------  546

seq1  CTGAACAGAAGAGCAATGGCTTGTGCTGTAAGATCGAGAATTGACAAATG  800
                                                        
seq2  --------------------------------------------------  546

seq1  GGACCTAATGAAACTCCAAAGTTTCTGCAAGGCAAAAGACACTGTCTATA  850
                                                        
seq2  --------------------------------------------------  546

seq1  AGACAAAAAGACCACCAACAGACTGGGAAAGGATCTTTACCTATCCTAAA  900
                                                        
seq2  --------------------------------------------------  546

seq1  TCAGATAGGGGACTAATATCCAACATATATAAAGAACTCAAGAAGGTGGA  950
                                                        
seq2  --------------------------------------------------  546

seq1  CCTCAGAAAATCAAATAACCCCATTAAAAAATGGGGCTCAGAACTGAACA  1000
                                                        
seq2  --------------------------------------------------  546

seq1  AAGAATTC  1008
              
seq2  --------  546