BAC Information

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BAC

Clone NameB6Ng01-160G17
Chromosome2 (Build37)
Map Location 140,024,472 - 140,025,523
singlet/doubletsinglet
Overlap gene2310003L22Rik
Upstream geneLOC628103, C130053K05Rik, LOC100043792, 5430433G21Rik, Tasp1, LOC672103, LOC269365, Esf1
Downstream geneSel1l2, 2900006F19Rik, Flrt3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-160G17.bB6Ng01-160G17.g
ACCDH953797DH953798
length1,2281,056
definitionDH953797|Mus musculus domesticus DNA, BAC clone: B6Ng01-160G17, 5' end.DH953798|Mus musculus domesticus DNA, BAC clone: B6Ng01-160G17, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcatcccatatacagtcatcaaacccagacactattatggatgcca
agaagtgcatgctgataggagcctgatataagctgtctcctgagaggctc
tgccagagcctgacagagaagtcttctcttaatcggttgtaataatcatt
taatttctgtccttaagtctatttatgtggggattatacttatcaacttg
tatatgctaaaccaacctgaggactctggaatcagataaacttgctcata
tcacattttagttaaaacattaaatataataagcaaataaagtattttga
aagctgagagaaatatcacatacaaaagcaaggccattataataactggt
ttctcagcattaactttaaatacttgaagggtttagaatgatatgccatc
cctgactgctacatccagaaaaactgtcacaattaaagaaaggaacactt
tgcataaaaaagcaggctaaaggaattcatgactgagccaattctacaaa
agattcttgaaaaaaaatttgatctgacaataaaaataaatatatccata
aggctataggaaaaaaataaactgtgatagaacagtagttaagaaaacga
agaatcagaaactaccaaccactgtaaaattgtaatgataggaattaata
tatacttttcaatagcaattctaaaaatttatatatgtaaatatatatat
actaatatatactataagcatgtaatatatcctatttttaactaattcta
aataataaagtataaacaataaataataaatctaaatatagcctcaattc
tctaatcaaaagaaacagattagcatagtggatataaaaacatgttgcct
cccagaaatgcccttcatcatcaaagacagatgcaccctagaatgaagga
tagaaaaagcattctaattaaatggaatagaaaacaaacaggtgtgttgt
tctataactgaaaagtagactcaaacaaaattatttagaaaaaaatagta
aatactctactgataaaggacatctggtaaaagtattaacatctaaatta
tacttccgcactcattcatgaacaaaccctacctgtctagtagggttcca
tgctatgaaggacctgaccaggcaactccatatataatattattattata
atacgctttatcgtatcagcctctatcctcgttccagttcaccgtacata
tcctctcatatggaatctaacccatgtc
gaattctccaggatgaaggatagggaacactaggaggggcggcaccaaga
actgtgtgtgtgtagtcgtgggcggggagctatgaaaggttctgtatctc
cgacacttaggctgagggaactgtggtaataatattgcgcaggcgtatag
aacaggcagacgatgggcaatgatagaagaccagaagcttctagatttcc
tcggatgaggatgagccttatagtttgtcttgggggaattttcctcagag
atgactcaggttcaagtgtagtagaaagtccgttgtttgcctgcttgtaa
ggcatggctcataggaggctaagacaggacctagcacagtcagtctgtcc
tggtatacgaggaaactcaggcacagaggagaaaggaccttgtccgcgtt
gtagtggaggcaggcagctcggttcataccctgaagtctctgctctttac
ccagtgggaaaagtctgagggtgctgggaggggaggaacgtgggtgtttg
ctggctgctcctgtgccaactggaaggtggcgtcccctagctggcttttg
tattttacatctctgttgtgtctgttttctgatggttgaggtgtatctca
ttttagctgccgttattattaattcacagaaaaaaatcgagaatgttgag
ctaattttacaaacaagtttcatatcagctgacgaatgcatgagacattt
tcaaggctttcacagtggttttaagggtaagttcagttttgtttttcaag
gcattactcagcatggtttcagtaatccatattaaagtttgtttttaata
agctttgattttacctttaaaaacacctgtgagaaagccaggtagtggtg
ggtaactcacccccttcatcacccacacctcttaaggcagaggcaggtgg
attctgtgtgagtttggagccagcttgctctacagagctcgttccagcac
agcaaggctcatgaagaaccttggaaaaccaaaccaagctcaatgcaccc
tattcccgtctcagcatttggccatatccaatgtaattcacttgcaaatt
cttaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_140024472_140025523
seq2: B6Ng01-160G17.g_66_1121

seq1  GAATTCTCCAGGATGAAGGATAGGGAACACTAGGAGGGGCGGCACCAAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCAGGATGAAGGATAGGGAACACTAGGAGGGGCGGCACCAAGA  50

seq1  ACTGTGTGTGTGTAGTCGTGGGCGGGGAGCTATGAAAGGTTCTGTATCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTGTGTGTGTAGTCGTGGGCGGGGAGCTATGAAAGGTTCTGTATCTC  100

seq1  CGACACTTAGGCTGAGGGAACTGTGGTAATAATATTGCGCAGGCGTATAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGACACTTAGGCTGAGGGAACTGTGGTAATAATATTGCGCAGGCGTATAG  150

seq1  AACAGGCAGACGATGGGCAATGATAGAAGACCAGAAGCTTCTAGATTTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGGCAGACGATGGGCAATGATAGAAGACCAGAAGCTTCTAGATTTCC  200

seq1  TCGGATGAGGATGAGCCTTATAGTTTGTCTTGGGGGAATTTTCCTCAGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGGATGAGGATGAGCCTTATAGTTTGTCTTGGGGGAATTTTCCTCAGAG  250

seq1  ATGACTCAGGTTCAAGTGTAGTAGAAAGTCCGTTGTTTGCCTGCTTGTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACTCAGGTTCAAGTGTAGTAGAAAGTCCGTTGTTTGCCTGCTTGTAA  300

seq1  GGCATGGCTCATAGGAGGCTAAGACAGGACCTAGCACAGTCAGTCTGTCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATGGCTCATAGGAGGCTAAGACAGGACCTAGCACAGTCAGTCTGTCC  350

seq1  TGGTATACGAGGAAACTCAGGCACAGAGGAGAAAGGACCTTGTCCGCGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTATACGAGGAAACTCAGGCACAGAGGAGAAAGGACCTTGTCCGCGTT  400

seq1  GTAGTGGAGGCAGGCAGCTCGGTTCATACCCTGAAGTCTCTGCTCTTTAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTGGAGGCAGGCAGCTCGGTTCATACCCTGAAGTCTCTGCTCTTTAC  450

seq1  CCAGTGGGAAAAGTCTGAGGGTGCTGGGAGGGGAGGAACGTGGGTGTTTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTGGGAAAAGTCTGAGGGTGCTGGGAGGGGAGGAACGTGGGTGTTTG  500

seq1  CTGGCTGCTCCTGTGCCAACTGGAAGGTGGCGTCCCCTAGCTGGCTTTTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCTGCTCCTGTGCCAACTGGAAGGTGGCGTCCCCTAGCTGGCTTTTG  550

seq1  TATTTTACATCTCTGTTGTGTCTGTTTTCTGATGGTTGAGGTGTATCTCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTACATCTCTGTTGTGTCTGTTTTCTGATGGTTGAGGTGTATCTCA  600

seq1  TTTTAGCTGCCGTTATTATTAATTCACAGAAAAAAATCGAGAATGTTGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAGCTGCCGTTATTATTAATTCACAGAAAAAAATCGAGAATGTTGAG  650

seq1  CTAATTTTACAAACAAGTTTCATATCAGCTGACGAATGCATGAGACATTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATTTTACAAACAAGTTTCATATCAGCTGACGAATGCATGAGACATTT  700

seq1  TCAAGGCTTTCACAGTGGTTTTAA-GGTAAGTTCAGTTTTGTTTTTCAAG  749
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  TCAAGGCTTTCACAGTGGTTTTAAGGGTAAGTTCAGTTTTGTTTTTCAAG  750

seq1  GCAATACTCAGCATTGTTTCAGTAATCCATATTAAAGTTTGTTTTTAATA  799
      ||| |||||||||| |||||||||||||||||||||||||||||||||||
seq2  GCATTACTCAGCATGGTTTCAGTAATCCATATTAAAGTTTGTTTTTAATA  800

seq1  AGCATTTGAATTTACC-TTAAAAACA-CTGTGAGAAAGCCAGGTAGTGGT  847
      ||| ||||| |||||| ||||||||| |||||||||||||||||||||||
seq2  AGC-TTTGATTTTACCTTTAAAAACACCTGTGAGAAAGCCAGGTAGTGGT  849

seq1  -GGTAACTCA-CCCCTTCATCACCAACACCCCTT-AGGCAGAGGCAGGTG  894
       ||||||||| ||||||||||||| ||||| ||| |||||||||||||||
seq2  GGGTAACTCACCCCCTTCATCACCCACACCTCTTAAGGCAGAGGCAGGTG  899

seq1  GA-TCTGTGTGAGTTTGGAGCCAGCCTGCTCTACAGAGCTCGTTCCAGCA  943
      || |||||||||||||||||||||| ||||||||||||||||||||||||
seq2  GATTCTGTGTGAGTTTGGAGCCAGCTTGCTCTACAGAGCTCGTTCCAGCA  949

seq1  CAGCCAAGGCTACATAAAGAAACTCTGGAAAAACCAAACCAAGC-CAAAG  992
      ||| ||||||| ||| ||||| || ||| ||||||||||||||| ||| |
seq2  CAG-CAAGGCT-CATGAAGAACCT-TGG-AAAACCAAACCAAGCTCAATG  995

seq1  CACCACA-TCTCGTCTCAGCATTTGGCCAAGATCAAATGTAAAATCAC-T  1040
      ||||  | || ||||||||||||||||| | ||| ||||| || |||| |
seq2  CACCCTATTCCCGTCTCAGCATTTGGCC-ATATCCAATGT-AATTCACTT  1043

seq1  GCAAA-TCTTAAA  1052
      ||||| |||||||
seq2  GCAAATTCTTAAA  1056