BAC Information

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BAC

Clone NameB6Ng01-160I05
Chromosome2 (Build37)
Map Location 61,252,177 - 61,433,534
singlet/doubletdoublet
Overlap geneTank
Upstream genePla2r1, Itgb6, Rbms1, ENSMUSG00000075325
Downstream genePsmd14, Tbr1, LOC100039274, Slc4a10, Dpp4, Gcg, Fap
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-160I05.bB6Ng01-160I05.g
ACCDH953869DH953870
length2411,155
definitionDH953869|Mus musculus domesticus DNA, BAC clone: B6Ng01-160I05, 5' end.DH953870|Mus musculus domesticus DNA, BAC clone: B6Ng01-160I05, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(61,433,294 - 61,433,534)(61,252,177 - 61,253,353)
sequence
gaattcaacagagatcctgcctctgcctcctagcactgggattaaaggca
tgtgccaccatgcctggcttttctttttagacagggtctcacatggccca
atctttcgacttcaaaaaaaataaaaaaagaattttcagtcagttggaaa
agaactgaaagaactaatttcttttctctctttctttccttttctttttt
ggcgtgtagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg
gaattctttacttctgggctcttttgtagataaactaagtacatttttca
ttatgagttggtcatgttcttcttgggaccaaagatagacaattttcaac
ataaataagtgatgtgttgtaaaagatagatatgagtttgtcatagacat
tacataatatatacatgcataaaatatcacaccatgttccataaatatgt
atagttttatgcttttgtttgtcagctaaatttaaatttgaaaatatgtt
tgattatctataagaccgagaactggtcacaaaaatttctgcatattggt
ttttcatctataggattataagactggcataaaataatctataaatttat
cctcatttatttttaaataacaattgtacatgtgcttgtttgtggtattt
gtttatatgtgtgtacatgtgcatgcatgaatggagttcaatcaaagtca
ggtgtcttcttcctctatcactctccaccttctgttttgagacagcatct
ctcactgaacatggagctcaccacttatcaagattggctggatagtagat
cccatgatccccttgtgtctgcctcctggtgctaggattataggcagatt
ctgccacagctgtttttttatatggatgctagatcccagtgttggttctc
atgcttgcatggcaagtgctttatccactaaaccagcccctctcttcctt
tttatactctggagtaataaaatagccaaagggattgataatagcagtgg
aaataactcaactgcagaagagtgtggtcaatgcacactcacaatctact
ctgcatttcatgtgtttctataacattcccagatacaaatgagatctata
gcttcaagagatggccaaggtagagggaaccacgacttttttctttttac
tcaaatgcctgtgttgtgaaacacgaggtaggatatgtaggtctagtccc
cacttcacactgtagaagtgtctgttagagtagcaaatgccaggctccac
tcaaaggactatggggattttcttttaagattatttataataaatgtaag
gaaccatagctgcttcgaactccaaagagggagccagatctcgttacgat
ggttgtgagcaccatgtgggtgctggaattgaactcaaacttggaagagc
gtcgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_61433294_61433534
seq2: B6Ng01-160I05.b_47_287 (reverse)

seq1  CACACACACACACACACACACACACACACACACTACACGCCAAAAAAGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACACACACACACACTACACGCCAAAAAAGAA  50

seq1  AAGGAAAGAAAGAGAGAAAAGAAATTAGTTCTTTCAGTTCTTTTCCAACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAAAGAAAGAGAGAAAAGAAATTAGTTCTTTCAGTTCTTTTCCAACT  100

seq1  GACTGAAAATTCTTTTTTTATTTTTTTTGAAGTCGAAAGATTGGGCCATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGAAAATTCTTTTTTTATTTTTTTTGAAGTCGAAAGATTGGGCCATG  150

seq1  TGAGACCCTGTCTAAAAAGAAAAGCCAGGCATGGTGGCACATGCCTTTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGACCCTGTCTAAAAAGAAAAGCCAGGCATGGTGGCACATGCCTTTAA  200

seq1  TCCCAGTGCTAGGAGGCAGAGGCAGGATCTCTGTTGAATTC  241
      |||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAGTGCTAGGAGGCAGAGGCAGGATCTCTGTTGAATTC  241

seq1: chr2_61252177_61253353
seq2: B6Ng01-160I05.g_68_1222

seq1  GAATTCTTTACTTCTGGGCTCTTTTGTAGATAAACTAAGTACATTTTTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTACTTCTGGGCTCTTTTGTAGATAAACTAAGTACATTTTTCA  50

seq1  TTATGAGTTGGTCATGTTCTTCTTGGGACCAAAGATAGACAATTTTCAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGAGTTGGTCATGTTCTTCTTGGGACCAAAGATAGACAATTTTCAAC  100

seq1  ATAAATAAGTGATGTGTTGTAAAAGATAGATATGAGTTTGTCATAGACAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATAAGTGATGTGTTGTAAAAGATAGATATGAGTTTGTCATAGACAT  150

seq1  TACATAATATATACATGCATAAAATATCACACCATGTTCCATAAATATGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATAATATATACATGCATAAAATATCACACCATGTTCCATAAATATGT  200

seq1  ATAGTTTTATGCTTTTGTTTGTCAGCTAAATTTAAATTTGAAAATATGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTTTTATGCTTTTGTTTGTCAGCTAAATTTAAATTTGAAAATATGTT  250

seq1  TGATTATCTATAAGACCGAGAACTGGTCACAAAAATTTCTGCATATTGGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTATCTATAAGACCGAGAACTGGTCACAAAAATTTCTGCATATTGGT  300

seq1  TTTTCATCTATAGGATTATAAGACTGGCATAAAATAATCTATAAATTTAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCATCTATAGGATTATAAGACTGGCATAAAATAATCTATAAATTTAT  350

seq1  CCTCATTTATTTTTAAATAACAATTGTACATGTGCTTGTTTGTGGTATTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCATTTATTTTTAAATAACAATTGTACATGTGCTTGTTTGTGGTATTT  400

seq1  GTTTATATGTGTGTACATGTGCATGCATGAATGGAGTTCAATCAAAGTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTATATGTGTGTACATGTGCATGCATGAATGGAGTTCAATCAAAGTCA  450

seq1  GGTGTCTTCTTCCTCTATCACTCTCCACCTTCTGTTTTGAGACAGCATCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTCTTCTTCCTCTATCACTCTCCACCTTCTGTTTTGAGACAGCATCT  500

seq1  CTCACTGAACATGGAGCTCACCACTTATCAAGATTGGCTGGATAGTAGAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACTGAACATGGAGCTCACCACTTATCAAGATTGGCTGGATAGTAGAT  550

seq1  CCCATGATCCCCTTGTGTCTGCCTCCTGGTGCTAGGATTATAGGCAGATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATGATCCCCTTGTGTCTGCCTCCTGGTGCTAGGATTATAGGCAGATT  600

seq1  CTGCCACAGCTGTTTTTTTATATGGATGCTAGATCCCAGTGTTGGTTCTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCACAGCTGTTTTTTTATATGGATGCTAGATCCCAGTGTTGGTTCTC  650

seq1  ATGCTTGCATGGCAAGTGCTTTATCCACTAAACCAGCCCCTCTCTTCCTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTTGCATGGCAAGTGCTTTATCCACTAAACCAGCCCCTCTCTTCCTT  700

seq1  TTTATACTCTGGAGTAATAAAATAGCCAAAGGGATTGATAATAGCAGTGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATACTCTGGAGTAATAAAATAGCCAAAGGGATTGATAATAGCAGTGG  750

seq1  AAATAACTCAACTGCAGAAGAGTGTGGTCAATGCACACTCACAATCTACT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAACTCAACTGCAGAAGAGTGTGGTCAATGCACACTCACAATCTACT  800

seq1  CTGCATTTCATGTGTTTCTATAACATTCCCAGATACAAATGAGATCTATA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCATTTCATGTGTTTCTATAACATTCCCAGATACAAATGAGATCTATA  850

seq1  GCTTCAAGAGATGGCCAAGGTAGAGGGAACCACGACTTTTTTCTTTTTTA  900
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  GCTTCAAGAGATGGCCAAGGTAGAGGGAACCACGACTTTTTTC-TTTTTA  899

seq1  CTCAAAATGCCTGTTGTTGTGAAACACGAGGTAGGAATATGTAGGTCTAG  950
      ||| ||||||||| ||||||||||||||||||||| ||||||||||||||
seq2  CTC-AAATGCCTG-TGTTGTGAAACACGAGGTAGG-ATATGTAGGTCTAG  946

seq1  TCCCCAACTTCACACTGTAGAAAGTGTCTGTAAGAGTAGCAAATGCCAGG  1000
      ||||| |||||||||||||| |||||||||| ||||||||||||||||||
seq2  TCCCC-ACTTCACACTGTAG-AAGTGTCTGTTAGAGTAGCAAATGCCAGG  994

seq1  CTCCACTCAAAGGACTAATTGGGGATTTTCTTTTAAGATTTATTTATTAT  1050
      |||||||||||||||||  ||||||||||||||||||| ||||||| || 
seq2  CTCCACTCAAAGGACTA--TGGGGATTTTCTTTTAAGA-TTATTTA-TAA  1040

seq1  TATATGTAAGTACACTATAGCTGTCTTCAGACACTCCAGAAGAGGGAGTC  1100
      || ||||||| | || ||||||| |||| || |||||| ||||||||| |
seq2  TAAATGTAAGGA-ACCATAGCTG-CTTC-GA-ACTCCA-AAGAGGGAGCC  1085

seq1  AGATCTCGTTACGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGA  1150
      |||||||||||| |||||||||||| |||||||||| |||| ||| ||||
seq2  AGATCTCGTTAC-GATGGTTGTGAG-CACCATGTGGGTGCT-GGAATTGA  1132

seq1  ACTCCAGACCTTTGGAAGAGCAGTCGG  1177
      ||| || ||  |||||||||| |||||
seq2  ACT-CAAAC--TTGGAAGAGC-GTCGG  1155