BAC Information

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BAC

Clone NameB6Ng01-160O07
Chromosome2 (Build37)
Map Location 160,491,042 - 160,492,086
singlet/doubletsinglet
Overlap geneTop1
Upstream geneLOC100043689, Gm826, Mafb, LOC100043892
Downstream genePlcg1, Zhx3, Lpin3, Emilin3, Chd6, LOC100043693, LOC100043694, LOC383769, LOC629655, LOC383770, Ptprt
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-160O07.bB6Ng01-160O07.g
ACCDH954150DH954151
length1,0311,146
definitionDH954150|Mus musculus domesticus DNA, BAC clone: B6Ng01-160O07, 5' end.DH954151|Mus musculus domesticus DNA, BAC clone: B6Ng01-160O07, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcactttgtagaccaggctggcctcaaaactcagaaatctgcctgc
ctctgcctccccagtgctgggattaaaggcgtgtgccaccacacccagca
ggggtaaaggttttaatctatcagtttacctactagtagtatacagggca
tctatacagttaagttagtagattattaagttttttaaatgttaaatgat
tgtttaacaactttctttgtggcaatgctacttgtatagtgatttaaatc
tattgtatcatttttcctcagatatccaagcctgccatgtagaacttaac
tgtattgatttatagagctcaacagacattcatatctcttattacactta
cattgatttgtatgtagaggttggtgggcagacagggttatggaacacat
gttctggtcagaagacaatccatggaagtcatttttctgctgtgtagatt
cctggggattgcacataattgtcatgtttggcatcagggacttttccagc
ctgagctggaaaagccatagagatttcaattaagaactttgtcttctttg
ttttctgctttgttttgtttttaatttaaaatctctcacagcatctgtag
cacagtttgaggatatactagatatgtaatgactttgagttcatattatt
ggcctagatgttttgtccatggaattatttaccagcaaccctaattttct
ctgagatagttaatttttacatttttagatagcatttgttttcaaaggct
tgggacccggttttaaattccattttgaaaatttatgcatttcagaagat
aataatgtgaaatctaataggaactactctgaatttgtattttaagttta
gtgctttttagtgacttttgcatgtttgtatttgacaaataatttgtttg
tttatttagacaggtctctctgtaaccctggttgtcctggactctctgtg
tagaccaggctggcttgactcatctgtctgctttgtctctgagtgctggg
ataaaggggtgtactatcaggtctgcttcaa
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ctcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactatggaaatcagtctggcggttcctca
gaaaactggatatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagtcagaagctggaaggaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggattagcccaaaaccta
agatacccaagatataagatacaatttcctaaacacatgaaactcaagaa
aaatgaagactgaagtgtgaatactatgcccctccttagaagtgggaaca
aaacacccttggaaggagttacagagacaaagtttggagctgagataaaa
ggatggaccatgtagacactagcatatccggggatccatcccataatcag
cttccaaatgctgacaccattgcatacactagcaagattatgctgaaagg
accctgatatagctgtctcttgtcagagtatgcctgggcctagcaaacat
agaagtggatgctcacagtcggctatggatggatcacatggcccccaatg
agagctagagaagtaccaaagagctaagggatctgcaccctatagtgaca
catatgaactaccagtacccggagctctgactctagctgcatatgcatca
aagaatgctagtcgccatcactgaagagagggcccattgaccgcacctta
tatgcccagtacaggtacgcagcttaagggatgtgtggtgatgcta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_160491042_160492086
seq2: B6Ng01-160O07.b_44_1074

seq1  GAATTCACTTTGTAGACCAGGCTGGCCTCAAAACTCAGAAATCTGCCTGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTTTGTAGACCAGGCTGGCCTCAAAACTCAGAAATCTGCCTGC  50

seq1  CTCTGCCTCCCCAGTGCTGGGATTAAAGGCGTGTGCCACCACACCCAGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGCCTCCCCAGTGCTGGGATTAAAGGCGTGTGCCACCACACCCAGCA  100

seq1  GGGGTAAAGGTTTTAATCTATCAGTTTACCTACTAGTAGTATACAGGGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGTAAAGGTTTTAATCTATCAGTTTACCTACTAGTAGTATACAGGGCA  150

seq1  TCTATACAGTTAAGTTAGTAGATTATTAAGTTTTTTAAATGTTAAATGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATACAGTTAAGTTAGTAGATTATTAAGTTTTTTAAATGTTAAATGAT  200

seq1  TGTTTAACAACTTTCTTTGTGGCAATGCTACTTGTATAGTGATTTAAATC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTAACAACTTTCTTTGTGGCAATGCTACTTGTATAGTGATTTAAATC  250

seq1  TATTGTATCATTTTTCCTCAGATATCCAAGCCTGCCATGTAGAACTTAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGTATCATTTTTCCTCAGATATCCAAGCCTGCCATGTAGAACTTAAC  300

seq1  TGTATTGATTTATAGAGCTCAACAGACATTCATATCTCTTATTACACTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATTGATTTATAGAGCTCAACAGACATTCATATCTCTTATTACACTTA  350

seq1  CATTGATTTGTATGTAGAGGTTGGTGGGCAGACAGGGTTATGGAACACAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGATTTGTATGTAGAGGTTGGTGGGCAGACAGGGTTATGGAACACAT  400

seq1  GTTCTGGTCAGAAGACAATCCATGGAAGTCATTTTTCTGCTGTGTAGATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTGGTCAGAAGACAATCCATGGAAGTCATTTTTCTGCTGTGTAGATT  450

seq1  CCTGGGGATTGCACATAATTGTCATGTTTGGCATCAGGGACTTTTCCAGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGGGATTGCACATAATTGTCATGTTTGGCATCAGGGACTTTTCCAGC  500

seq1  CTGAGCTGGAAAAGCCATAGAGATTTCAATTAAGAACTTTGTCTTCTTTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGCTGGAAAAGCCATAGAGATTTCAATTAAGAACTTTGTCTTCTTTG  550

seq1  TTTTCTGCTTTGTTTTGTTTTTAATTTAAAATCTCTCACAGCATCTGTAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTGCTTTGTTTTGTTTTTAATTTAAAATCTCTCACAGCATCTGTAG  600

seq1  CACAGTTTGAGGATATACTAGATATGTAATGACTTTGAGTTCATATTATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGTTTGAGGATATACTAGATATGTAATGACTTTGAGTTCATATTATT  650

seq1  GGCCTAGATGTTTTGTCCATGGAATTATTTACCAGCAACCCTAATTTTCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTAGATGTTTTGTCCATGGAATTATTTACCAGCAACCCTAATTTTCT  700

seq1  CTGAGATAGTTAATTTTTACATTTTTAGATAGCATTTGTTTTCAAAGGCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGATAGTTAATTTTTACATTTTTAGATAGCATTTGTTTTCAAAGGCT  750

seq1  TGGGACCCGGTTTTAAATTCCATTTTGAAAATTTATGCATTTCAGGAAGA  800
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  TGGGACCCGGTTTTAAATTCCATTTTGAAAATTTATGCATTTCA-GAAGA  799

seq1  TAATAATGTGAAATCTAATAGGAACTACTCTGAATTTGTATTTTAAAGTT  850
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  TAATAATGTGAAATCTAATAGGAACTACTCTGAATTTGTATTTT-AAGTT  848

seq1  TAGTGCTTTTTAGTGACTTTTGCATGTTTGTATTTGACAAAAATAAATTT  900
      |||||||||||||||||||||||||||||||||||||||||    |||||
seq2  TAGTGCTTTTTAGTGACTTTTGCATGTTTGTATTTGACAAA---TAATTT  895

seq1  GTTTGTTTATTTAGACAGGGTCTCTCTGTAACCCTGGTTGTCCTGGAACT  950
      ||||||||||||||||| |||||||||||||||||||||||||||| |||
seq2  GTTTGTTTATTTAGACA-GGTCTCTCTGTAACCCTGGTTGTCCTGG-ACT  943

seq1  CTCTGTGTAGACCAGGCTGGCCTTGAACTCAATCTGTCTGCCTTTGTCTC  1000
      |||||||||||||||||||| |||| |||| ||||||||| |||||||| 
seq2  CTCTGTGTAGACCAGGCTGG-CTTG-ACTC-ATCTGTCTG-CTTTGTCT-  988

seq1  CTGAGTGCTGGGATTAAAGGCGTGTACTACCAGGTCTGGCTTCAA  1045
      ||||||||||||| |||||| |||||||| ||||||| |||||||
seq2  CTGAGTGCTGGGA-TAAAGGGGTGTACTATCAGGTCT-GCTTCAA  1031