BAC Information

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BAC

Clone NameB6Ng01-161G24
Chromosome2 (Build37)
Map Location 55,083,887 - 55,084,451
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC666913, LOC626563, LOC100041792, LOC100042878, Galnt13
Downstream geneLOC666936, Kcnj3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-161G24.bB6Ng01-161G24.g
ACCDH954549DH954550
length5591,138
definitionDH954549|Mus musculus domesticus DNA, BAC clone: B6Ng01-161G24, 5' end.DH954550|Mus musculus domesticus DNA, BAC clone: B6Ng01-161G24, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
tgtcctgtgtgtgttagactggattcttaagtaagaacaatcttatttct
acacagtaggttactttagatttctgtcagctcaagtatttggggaaagc
tacaatcaataggacagcagacttgagggtctcttaatgtcagtgtatga
ctgcacccagattgctgtttggtcttggcaattaattacttagtaagcaa
gcttaggggctatcttgaagatagggtgtgctttaaaaggctttaccttt
ccactcttcctagcaatcttactgccatatcttctagtaattattctttg
tatgaagtaactattaaatgaatgctttctaatatccaggcaggagtggt
ataaaggaatctgaaaactcagaagtgttatagaaaataatagtgaagcc
tgaataaactacgaagtgtaatgacgtaatgaagatcttgaggagacagt
gctaattaaatactagcagctgctatttattcccattctttgcagaacaa
tagtaacattatagaattaaattgaagcaatgattagtgttgtgtgtgtg
ggggggtgt
gaattctttgtttagctccgtcccccatttttaatagggttatatggttc
tctggagtctaactttatgagttctttgtatatattggatattagtctcc
tatcagatttaggattggtaaagatcctttcccaatctgttcatggcctt
ttggtcttattgacagtgtcttttgccttacaaaaactttgcagttttat
gaggtctcatttgtaaattcttgatcttcaagcataagttattggtgctc
tatttaggagatttttcctgtccccatgtgtcagaggtatttccctacct
tctcttctattagattcagtgtatctagttttatgtggaggtcattgacc
aactctgacttgagctttgtataaggacatatgaatgggtcaatttgcat
tcttctacatgttgccttgacagttaaaacaacaccatttgttgaaaatg
ctgtgttttttccactggttggttttagcttctatgtcaaagttcaagta
accataggtttttgggttcatttctgggtcttcaattggattccattgat
cttcctgcctgtctctgtaccagtgccatgaaacttctatcaaaataggc
tctgtagtacaacttgcggtcagagatggtgattccccccagaaattctt
ttattgttgagaatagtttttttttctatcctttttttgttatctaaatt
aatttgagaattgctctttcgaactctatgaagcttgagttcgaattttg
atggggactgcattgaatctgtaagattgcttttcagaaatatgggcatt
tctactatattaatcctgccatctacaagcatggaagataatcccaatat
tctaagtttttgatttctttcttcagagatttgaaggttcttgtcaaaaa
gatcttttacttgcttcttagagtcacaccaagctattttaattgtttgt
gattatgtgaaggtgtcgtttccctaatttcttttcagccatttattctt
tgaagtatagggagggcatgatttgttgcatttaatttatatccagccat
tggctgattgttataggtagcttctctggggaattttggggtcaataatt
atcatatatatctcttgtacagagggtatttgtgaggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_55083887_55084451
seq2: B6Ng01-161G24.b_45_609

seq1  GAATTCTGTCCTGTGTGTGTTAGACTGGATTCTTAAGTAAGAACAATCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTCCTGTGTGTGTTAGACTGGATTCTTAAGTAAGAACAATCTT  50

seq1  ATTTCTACACAGTAGGTTACTTTAGATTTCTGTCAGCTCAAGTATTTGGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTACACAGTAGGTTACTTTAGATTTCTGTCAGCTCAAGTATTTGGG  100

seq1  GAAAGCTACAATCAATAGGACAGCAGACTTGAGGGTCTCTTAATGTCAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGCTACAATCAATAGGACAGCAGACTTGAGGGTCTCTTAATGTCAGT  150

seq1  GTATGACTGCACCCAGATTGCTGTTTGGTCTTGGCAATTAATTACTTAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGACTGCACCCAGATTGCTGTTTGGTCTTGGCAATTAATTACTTAGT  200

seq1  AAGCAAGCTTAGGGGCTATCTTGAAGATAGGGTGTGCTTTAAAAGGCTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAAGCTTAGGGGCTATCTTGAAGATAGGGTGTGCTTTAAAAGGCTTT  250

seq1  ACCTTTCCACTCTTCCTAGCAATCTTACTGCCATATCTTCTAGTAATTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTTCCACTCTTCCTAGCAATCTTACTGCCATATCTTCTAGTAATTAT  300

seq1  TCTTTGTATGAAGTAACTATTAAATGAATGCTTTCTAATATCCAGGCAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTGTATGAAGTAACTATTAAATGAATGCTTTCTAATATCCAGGCAGG  350

seq1  AGTGGTATAAAGGAATCTGAAAACTCAGAAGTGTTATAGAAAATAATAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGTATAAAGGAATCTGAAAACTCAGAAGTGTTATAGAAAATAATAGT  400

seq1  GAAGCCTGAATAAACTACGAAGTGTAATGACGTAATGAAGATCTTGAGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCCTGAATAAACTACGAAGTGTAATGACGTAATGAAGATCTTGAGGA  450

seq1  GACAGTGCTAATTAAATACTAGCAGCTGCTATTTATTCCCATTCTTTGCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGTGCTAATTAAATACTAGCAGCTGCTATTTATTCCCATTCTTTGCA  500

seq1  GAACAATAGTAACATTATAGAATTAAATTGAAGCAATGATTAGTGTTGTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACAATAGTAACATTATAGAATTAAATTGAAGCAATGATTAGTGTTGTG  550

seq1  TGTGTGGGGGGGTGT  565
      |||||||||||||||
seq2  TGTGTGGGGGGGTGT  565