BAC Information

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BAC

Clone NameB6Ng01-161K04
Chromosome2 (Build37)
Map Location 157,265,346 - 157,435,376
singlet/doubletdoublet
Overlap geneSrc, Blcap, Nnat
Upstream geneEpb4.1l1, 0610011L14Rik, Dlgap4, Myl9, LOC433546, Tgif2, LOC100043677, 1110008F13Rik, Sla2, LOC100043880, Ndrg3, LOC668943, Dsn1, 9830001H06Rik, Gm1332, Samhd1, Rbl1, LOC100043882, 4922505G16Rik, Rpn2, Ghrh, LOC100043678, Manbal
Downstream geneCtnnbl1, LOC100043681, Gm691, 2610036D13Rik, 2610304G08Rik, Tgm2, D630003M21Rik, Bpi, Lbp, 9430008C03Rik, A930034L06Rik, B230339M05Rik, LOC628935, BC054059, LOC545481
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-161K04.bB6Ng01-161K04.g
ACCDH954697DH954698
length897544
definitionDH954697|Mus musculus domesticus DNA, BAC clone: B6Ng01-161K04, 5' end.DH954698|Mus musculus domesticus DNA, BAC clone: B6Ng01-161K04, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(157,434,480 - 157,435,376)(157,265,346 - 157,265,895)
sequence
gaattcaaggtcagcctgggcaatgtagtgagaccatgtctcaaaataaa
aaggggggagaaaaaacagatggtatacagtacttggctaccatgcagga
aaccctagatcaaccctcagtctgtctgtctgtctgtctgtctgtctgtc
tgtttcattttggtttattgaggcagggtctcactatgtagctctggcta
acctaggactcactatgtagaccaggctgtcctcaaactctacctgcttc
agaaaagctgctactctgcctctggaaagctgaggttagagacagacagg
tggcagccttacccaccgcgatcggccagaaagctttcttgactctccag
ggctcaccggggctcaagattgttcacttacagaaattttagattttgta
atcatacatcaagcatcccggcctgaagaggctcacatttaggttcaaga
gagactgagtgaactaatgtccttcctaacatcattcacaccgtactgac
aaaccctggtggaagatctgtgcctgagtctgcacagggcttgcacttgg
ctgggtatggcaggcctgcctgctgttttctttggagcaggaactaatct
ctgcccttccaagtgaggagatgaaatttttggtgtaagccgggcagtgg
tggcgcatcatctttaacccccagcacttgggaggcagatgctggcagat
ttctgagtttgaggccagcctggtctacagagtgattccaggacagccag
ggctacccagagaaaccctgtctcagaaaaaggaaaaaaaaaaagtattt
ggtgtgcatcccaactgatgatgtagattgttcttttaaccctgtaatga
attcaccctaagaggcacttatgaatcatgccatgtgccaacacttt
ccatgggattaatccatttgaagtggcccatcgcatgttcttgccagagt
tgattggctctgttcacttagcataatattttcaagacctacttagtcgg
ggcatcatttagcctgctgtgtcaagatttcttcttgtcaaatatttcat
tgtgtggatatgccttatgtctgtctgtctctgtcctctgggttgttcca
cgtgggggatgtaggggtggatgccgctgtgagcacacatggaggctgga
ggctgacatcttcctcaatcacttgtccaacttatcttttgaggtagtgt
ctctcattgaacctgcacctcattctcccagctagactaggtcaggaagt
ccccaggatctgcctgtcgtggctttcattgctggagtcacaggcatgtg
ctgccatacctggcttatatagtgctggacatctggtctcaggtccccat
gcttccatagcaggcactttattcataccaccatctccacaggccatgta
tgtgtatgtttatgtatgcatatatgtatatatgtgtgtgtgta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_157434480_157435376
seq2: B6Ng01-161K04.b_40_937 (reverse)

seq1  AAAGTGTTGGCACATGGCCTTGCTTCCTAGGTGCCTCTTAGGGTGAGTTC  50
      ||||||||||||||||| | || ||| || |||||||||||||||| |||
seq2  AAAGTGTTGGCACATGG-CATGATTCATAAGTGCCTCTTAGGGTGAATTC  49

seq1  ATTCCAGGGTTAAAAGACACAGTCTACATCATCAGTTTGGATGCACACCA  100
      ||| ||||||||||||| ||| ||||||||||||||| ||||||||||||
seq2  ATTACAGGGTTAAAAGA-ACAATCTACATCATCAGTTGGGATGCACACCA  98

seq1  AATACTTTTTTTTTTTCC-TTTTCTGAGACAGGGTTTCTCTGTGTAGCCC  149
      |||||||||||||||||| ||||||||||||||||||||||| |||||||
seq2  AATACTTTTTTTTTTTCCTTTTTCTGAGACAGGGTTTCTCTGGGTAGCCC  148

seq1  TGGCTGTCCTGGAATCACTCTGTAGACCAGGCTGGCCTCAAACTCAGAAA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTGTCCTGGAATCACTCTGTAGACCAGGCTGGCCTCAAACTCAGAAA  198

seq1  TCTGCCTGCCTCTGCCTCCCAAGTGCT-GGGGTTAAAGATGATGCGCCAC  248
      |||||| || ||||||||||||||||| ||||||||||||||||||||||
seq2  TCTGCCAGCATCTGCCTCCCAAGTGCTGGGGGTTAAAGATGATGCGCCAC  248

seq1  CACTGCCCGGCTTACACC-AAAATTTCATCTCCTCACTTGGAAGGGCAGA  297
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  CACTGCCCGGCTTACACCAAAAATTTCATCTCCTCACTTGGAAGGGCAGA  298

seq1  GATTAGTTCCTGCTCCAAAGAAAACAGCAGGCAGGCCTGCCATACCCAGC  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTAGTTCCTGCTCCAAAGAAAACAGCAGGCAGGCCTGCCATACCCAGC  348

seq1  CAAGTGCAAGCCCTGTGCAGACTCAGGCACAGATCTTCCACCAGGGTTTG  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTGCAAGCCCTGTGCAGACTCAGGCACAGATCTTCCACCAGGGTTTG  398

seq1  TCAGTACGGTGTGAATGATGTTAGGAAGGACATTAGTTCACTCAGTCTCT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTACGGTGTGAATGATGTTAGGAAGGACATTAGTTCACTCAGTCTCT  448

seq1  CTTGAACCTAAATGTGAGCCTCTTCAGGCCGGGATGCTTGATGTATGATT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAACCTAAATGTGAGCCTCTTCAGGCCGGGATGCTTGATGTATGATT  498

seq1  ACAAAATCTAAAATTTCTGTAAGTGAACAATCTTGAGCCCCGGTGAGCCC  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAATCTAAAATTTCTGTAAGTGAACAATCTTGAGCCCCGGTGAGCCC  548

seq1  TGGAGAGTCAAGAAAGCTTTCTGGCCGATCGCGGTGGGTAAGGCTGCCAC  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGAGTCAAGAAAGCTTTCTGGCCGATCGCGGTGGGTAAGGCTGCCAC  598

seq1  CTGTCTGTCTCTAACCTCAGCTTTCCAGAGGCAGAGTAGCAGCTTTTCTG  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCTGTCTCTAACCTCAGCTTTCCAGAGGCAGAGTAGCAGCTTTTCTG  648

seq1  AAGCAGGTAGAGTTTGAGGACAGCCTGGTCTACATAGTGAGTCCTAGGTT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAGGTAGAGTTTGAGGACAGCCTGGTCTACATAGTGAGTCCTAGGTT  698

seq1  AGCCAGAGCTACATAGTGAGACCCTGCCTCAATAAACCAAAATGAAACAG  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAGAGCTACATAGTGAGACCCTGCCTCAATAAACCAAAATGAAACAG  748

seq1  ACAGACAGACAGACAGACAGACAGACAGACTGAGGGTTGATCTAGGGTTT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGACAGACAGACAGACAGACAGACAGACTGAGGGTTGATCTAGGGTTT  798

seq1  CCTGCATGGTAGCCAAGTACTGTATACCATCTGTTTTTTCTCCCCCCTTT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCATGGTAGCCAAGTACTGTATACCATCTGTTTTTTCTCCCCCCTTT  848

seq1  TTATTTTGAGACATGGTCTCACTACATTGCCCAGGCTGACCTTGAATTCC  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTGAGACATGGTCTCACTACATTGCCCAGGCTGACCTTGAATTCC  898

seq1: chr2_157265346_157265895
seq2: B6Ng01-161K04.g_70_619

seq1  GAATTCCCATGGGATTAATCCATTTGAAGTGGCCCATCGCATGTTCTTGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCATGGGATTAATCCATTTGAAGTGGCCCATCGCATGTTCTTGC  50

seq1  CAGAGTTGATTGGCTCTGTTCACTTAGCATAATATTTTCAAGACCTACTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGTTGATTGGCTCTGTTCACTTAGCATAATATTTTCAAGACCTACTT  100

seq1  AGTCGGGGCATCATTTAGCCTGCTGTGTCAAGATTTCTTCTTGTCAAATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCGGGGCATCATTTAGCCTGCTGTGTCAAGATTTCTTCTTGTCAAATA  150

seq1  TTTCATTGTGTGGATATGCCTTATGTCTGTCTGTCTCTGTCCTCTGGGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATTGTGTGGATATGCCTTATGTCTGTCTGTCTCTGTCCTCTGGGTT  200

seq1  GTTCCACGTGGGGGATGTAGGGGTGGATGCCGCTGTGAGCACACATGGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCACGTGGGGGATGTAGGGGTGGATGCCGCTGTGAGCACACATGGAG  250

seq1  GCTGGAGGCTGACATCTTCCTCAATCACTTGTCCAACTTATCTTTTGAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGAGGCTGACATCTTCCTCAATCACTTGTCCAACTTATCTTTTGAGG  300

seq1  TAGTGTCTCTCATTGAACCTGCACCTCATTCTCCCAGCTAGACTAGGTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGTCTCTCATTGAACCTGCACCTCATTCTCCCAGCTAGACTAGGTCA  350

seq1  GGAAGTCCCCAGGATCTGCCTGTCGTGGCTTTCATTGCTGGAGTCACAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGTCCCCAGGATCTGCCTGTCGTGGCTTTCATTGCTGGAGTCACAGG  400

seq1  CATGTGCTGCCATACCTGGCTTATATAGTGCTGGACATCTGGTCTCAGGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTGCTGCCATACCTGGCTTATATAGTGCTGGACATCTGGTCTCAGGT  450

seq1  CCCCATGCTTCCATAGCAGGCACTTTATTCATACCACCATCTCCACAGGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCATGCTTCCATAGCAGGCACTTTATTCATACCACCATCTCCACAGGC  500

seq1  CATGTATGTGTATGTTTATGTATGCATATATGTATATATGTGTGTGTGTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTATGTGTATGTTTATGTATGCATATATGTATATATGTGTGTGTGTA  550