BAC Information

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BAC

Clone NameB6Ng01-161O22
Chromosome2 (Build37)
Map Location 31,603,202 - 31,713,943
singlet/doubletdoublet
Overlap geneAbl1, BC094274, Fibcd1
Upstream geneEG665645, 1700001O22Rik, 2610205E22Rik, Asb6, Prrx2, Ptges, Ppia-ps2_387.1, Tor1b, Tor1a, BC005624, Usp20, Fnbp1, Gpr107, Freq, LOC622345, LOC670182, LOC665700, BC034076, Ass1, Fubp3, LOC100041465, Prdm12, Exosc2
Downstream geneLamc3, 2810003C17Rik, Nup214, A130092J06Rik, LOC100040058, Ppapdc3, 5830434P21Rik, Pomt1, Uck1, LOC622534, 2900010J23Rik, Golga2, Dnm1, Ciz1, 1110008P14Rik, Lcn2, Ptges2, LOC100041671, Slc25a25, 4933440H19Rik, C230093N12Rik, Dpm2, Pip5kl1, St6galnac4, St6galnac6, Ak1, Eng, Fpgs, Cdk9, Sh2d3c, Tor2a, Ttc16, Ptrh1, 1700019L03Rik, Stxbp1
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-161O22.bB6Ng01-161O22.g
ACCDH954909DH954910
length1,085119
definitionDH954909|Mus musculus domesticus DNA, BAC clone: B6Ng01-161O22, 5' end.DH954910|Mus musculus domesticus DNA, BAC clone: B6Ng01-161O22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(31,603,202 - 31,604,296)(31,713,825 - 31,713,943)
sequence
gaattcaatgggtagaacaggctagcctccaactcagagagacctgcctg
cctttactctcgagtgcttgaataaaggtgtgcacgaccacacccagctt
tatctcaagtttttaacagactatgtgtattggagtgtgtacatgcatgc
agacgccagagttaaccattgctccctccattgctcttagtttttgagac
agactctttccctgaacctagagctcaccagtgagttctcaagataatcc
tgtctccatctccccaggaaaaactcctttccaaagagactgtgcatctc
cattgtcctgcatgattgttagcactgtgtttgtgactgtagcccgtgga
gtggggtgagatgggaacttgctgcagtggacatgaggaactcactgagt
gaatatagtgggagtcccatagaaccagactaggctggccttaaacctgc
ctgtttccttagtgctttgattaaaggtgtgtgccaccgttgcctggcct
gagcatctttttgggtgcttaccagccatttgttttgattcttggtgaca
agccaatgacccttttgccagttttaagccagtttgaacgtgttctaact
gggcaggaagggttctctgcattttgggatgcagctatgcctcagatcca
tggtaggatacatggcttttactttcctcacactgataccatttctcccc
tgtgttctttggagagatttatcatatgtttggactatttggagaattta
ggctttggagtaccaccatccacactgcaagctagagacccaggaaagct
ggtggggtttctagagaccttattaccctgggcagtgtgagatgctaatg
acttgaactgggaacacggaaaacagaagatcctgtcctgttcaagaagc
cagacccatgggctggagagatggctcagtcgttagagcattaactgctc
ttccagaaggtcctgagttcattcccagcaccacatgtgctcacaaccat
cctatagaagatcggacccctcttctggggtgctgaagacagctacaggt
tacttctttataaataagtaatctaaaaaataaaa
acagaaagccccgagagggtggtcaggagaagaatagattgttggtgtac
tccaagagagagagaagctggttagaattgagctctagggtagccacaca
gggtgaggggtgggggtgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_31603202_31604296
seq2: B6Ng01-161O22.b_50_1134

seq1  GAATTCAATGGGTAGAACAGGCTAGCCTCCAACTCAGAGAGACCTGCCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATGGGTAGAACAGGCTAGCCTCCAACTCAGAGAGACCTGCCTG  50

seq1  CCTTTACTCTCGAGTGCTTGAATAAAGGTGTGCACGACCACACCCAGCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTACTCTCGAGTGCTTGAATAAAGGTGTGCACGACCACACCCAGCTT  100

seq1  TATCTCAAGTTTTTAACAGACTATGTGTATTGGAGTGTGTACATGCATGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTCAAGTTTTTAACAGACTATGTGTATTGGAGTGTGTACATGCATGC  150

seq1  AGACGCCAGAGTTAACCATTGCTCCCTCCATTGCTCTTAGTTTTTGAGAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACGCCAGAGTTAACCATTGCTCCCTCCATTGCTCTTAGTTTTTGAGAC  200

seq1  AGACTCTTTCCCTGAACCTAGAGCTCACCAGTGAGTTCTCAAGATAATCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTCTTTCCCTGAACCTAGAGCTCACCAGTGAGTTCTCAAGATAATCC  250

seq1  TGTCTCCATCTCCCCAGGAAAAACTCCTTTCCAAAGAGACTGTGCATCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTCCATCTCCCCAGGAAAAACTCCTTTCCAAAGAGACTGTGCATCTC  300

seq1  CATTGTCCTGCATGATTGTTAGCACTGTGTTTGTGACTGTAGCCCGTGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGTCCTGCATGATTGTTAGCACTGTGTTTGTGACTGTAGCCCGTGGA  350

seq1  GTGGGGTGAGATGGGAACTTGCTGCAGTGGACATGAGGAACTCACTGAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGGTGAGATGGGAACTTGCTGCAGTGGACATGAGGAACTCACTGAGT  400

seq1  GAATATAGTGGGAGTCCCATAGAACCAGACTAGGCTGGCCTTAAACCTGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATATAGTGGGAGTCCCATAGAACCAGACTAGGCTGGCCTTAAACCTGC  450

seq1  CTGTTTCCTTAGTGCTTTGATTAAAGGTGTGTGCCACCGTTGCCTGGCCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTTCCTTAGTGCTTTGATTAAAGGTGTGTGCCACCGTTGCCTGGCCT  500

seq1  GAGCATCTTTTTGGGTGCTTACCAGCCATTTGTTTTGATTCTTGGTGACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCATCTTTTTGGGTGCTTACCAGCCATTTGTTTTGATTCTTGGTGACA  550

seq1  AGCCAATGACCCTTTTGCCAGTTTTAAGCCAGTTTGAACGTGTTCTAACT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAATGACCCTTTTGCCAGTTTTAAGCCAGTTTGAACGTGTTCTAACT  600

seq1  GGGCAGGAAGGGTTCTCTGCATTTTGGGATGCAGCTATGCCTCAGATCCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCAGGAAGGGTTCTCTGCATTTTGGGATGCAGCTATGCCTCAGATCCA  650

seq1  TGGTAGGATACATGGCTTTTACTTTCCTCACACTGATACCATTTCTCCCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTAGGATACATGGCTTTTACTTTCCTCACACTGATACCATTTCTCCCC  700

seq1  TGTGTTCTTTGGAGAGATTTATCATATGTTTGGACTATTTGGAGAATTTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTTCTTTGGAGAGATTTATCATATGTTTGGACTATTTGGAGAATTTA  750

seq1  GGCTTTGGAGTACCACCATCCACACTGCAAGCTAGAGACCCAGGAAAGCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTTGGAGTACCACCATCCACACTGCAAGCTAGAGACCCAGGAAAGCT  800

seq1  GGTGGGGTTTCTAGAGACCTTATTACCCTGGGCAGTGTGAGATGCTAATG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGGGTTTCTAGAGACCTTATTACCCTGGGCAGTGTGAGATGCTAATG  850

seq1  ACTTGAACTGGGAACACGGAAAACAGAAGATCCTGTCCTGTTCAAGAAGC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGAACTGGGAACACGGAAAACAGAAGATCCTGTCCTGTTCAAGAAGC  900

seq1  CAGACCCATGGGCTGGAGAGATGGCTCAGTCGTTAAGAGCATTAACTGCT  950
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  CAGACCCATGGGCTGGAGAGATGGCTCAGTCGTT-AGAGCATTAACTGCT  949

seq1  CTTCCAG-AGGTCCTGAGTTCAATTCCCAGCAACCACATGGTGGCTCACA  999
      ||||||| ||||||||||||| ||||||||| ||||||||   |||||||
seq2  CTTCCAGAAGGTCCTGAGTTC-ATTCCCAGC-ACCACATG--TGCTCACA  995

seq1  ACCAT-CTATAAGGAGATCGGACCCCCTCTTCTGGGGTGTCTGAAGACAG  1048
      ||||| |||| || |||||||| |||||||||||||||| ||||||||||
seq2  ACCATCCTAT-AGAAGATCGGA-CCCCTCTTCTGGGGTG-CTGAAGACAG  1042

seq1  CTACAGTGTACTTACATATAATAAATAAGTAAATCTAAAAAAAAAAA  1095
      ||||||  |||||     | |||||||||| ||||||||||| ||||
seq2  CTACAGGTTACTT---CTTTATAAATAAGT-AATCTAAAAAATAAAA  1085

seq1: chr2_31713825_31713943
seq2: B6Ng01-161O22.g_73_191 (reverse)

seq1  CCACCCCCACCCCTCACCCTGTGTGGCTACCCTAGAGCTCAATTCTAACC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCCCCACCCCTCACCCTGTGTGGCTACCCTAGAGCTCAATTCTAACC  50

seq1  AGCTTCTCTCTCTCTTGGAGTACACCAACAATCTATTCTTCTCCTGACCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTCTCTCTCTCTTGGAGTACACCAACAATCTATTCTTCTCCTGACCA  100

seq1  CCCTCTCGGGGCTTTCTGT  119
      |||||||||||||||||||
seq2  CCCTCTCGGGGCTTTCTGT  119