BAC Information

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BAC

Clone NameB6Ng01-162P13
Chromosome2 (Build37)
Map Location 80,874,559 - 81,018,553
singlet/doubletdoublet
Overlap genenone
Upstream genePde1a, LOC668005, Prdx6-rs1, Dnajc10, Frzb, Nckap1, LOC624223, Dusp19, LOC672381, Nup35, LOC103324, LOC668027, LOC100040624, LOC100040655
Downstream geneLOC100040704, Zfp804a
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-162P13.bB6Ng01-162P13.g
ACCDH955673DH955674
length1,1411,125
definitionDH955673|Mus musculus domesticus DNA, BAC clone: B6Ng01-162P13, 5' end.DH955674|Mus musculus domesticus DNA, BAC clone: B6Ng01-162P13, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(81,017,421 - 81,018,553)(80,874,559 - 80,875,691)
sequence
gaattctttgtttagctctgtaccccatttttaaattgggttatttgttt
ttctggagtctaacttgtgagttctttgtgtattttggatattagccctc
tattcaatgtagggttagtaaagatctttcccaagctgttactgttttgt
cccactgacagtgtcctttctcttacagaaacttgtaatttcatgaggtc
tcatttgtcaattgttgctcatttttacagtacctagaagatacaactat
ttcccaagagtcagagactagggtctcagaatgctcaactataaaatggc
agcaggtaaatatccctatccatttccatttcatttactatagtatttat
ctaataatgtattcattaaaagacggtataattattaattataactctga
caatagcagttagctcaatccatgtaagtattatagaaatgcctttcttc
atgtaactaaacatctataggcatatatatatatatatatatatatagcc
actcaaaagctactgaaactaccacaccacaaacacacacacgcacacac
acacagagagtcttggttccttttttcattaccctagtttcacaattaga
caagctctcttaatggtgagaaaatttgccactaggattttaagattccc
aatgcttcagagactatgattccaaagagaaatagcaagtttttaaatag
tagaacatcctgaattcaaacttcctgaagtactaacaatatgtccagac
taacaacaagtttaaccattttaaggtgcatttattaaagagcccatcaa
ataggtttcctacaggaaaacattatgtacaaggacaaaaatatttatta
ggccacattggcctggaaactggcagggaatgaaacactgtacttgagac
cagcattgtagaatcataatgttctttggatacaaagaagagtgttttat
caagacttatttatgtatctatttatttaattgtttctttattttgctat
gctactattagactcaagactaccactgagcttttttctaacaatccagg
attagttaaaaatagattattttttatgtagttattcccgaatacagggt
tccatttccgaattaataaaacctcaaaaggaagaaagatg
gaattcttgctttaccccaaagcttcagtggtctaaaattcacagtataa
aaatgactacaaaattctgcttttaatgactttgagctggaagggtggag
atgaaatgcaacaagatccatgtataagtcaggagtagaaagagtattgt
agctgatactggaagaaagatatttagccgtcatggagatcactgtctcc
gggccagtatctctaaactgtgcctgactttacctaagggtgcatgtttc
tcactctctgctatgcagatgaacttagcctgggctatgggaatttttca
gaattccataggtgattttaatttgcatctacaattaactacgggtgttc
ctgacatctgtataaaaggtttttattcttaaggtgtatgtgaatcatca
tatggttaacaaacgccaaaaattgtaccttaccccttgacatttctgtt
gaaatgctctgagatggcaccgcatgtttctgaagcatctcgggtgcttc
ccatgtgaaaataggtattccagaatattggcaaggctcagtctgaatgc
cccagagtacagggtgctgaatgtggcagaaaaaaaagagagatagcaga
gatacaacattgaatgcacaagaatcaaggacatggaatctcagtactga
tgtcttatctggactcataggttccttgagcctaggactaaaggaaagag
tgtggaattacaaaccagcttctgaattgcatccatttccagaagagttg
atgatgtggaaatttgcctttggaaattttgttttatcacaagtaaaata
taagataccaagggatattcaaattgtagataaagaacaagtacttttta
tgagtaatacatcctgtgtgattcgaatatatttgtataaataatatgtc
atttggtagaaatggaaactcaattgggactctgcattttatttgataaa
tcttagaaagctagaatttattgaattctcaaaggacagtgtgatcttgg
tgctgtattttaactgtatagagcatccaccatcagtctgaggacagcct
gatggcatgatatctagactgttttttcttctctttaagaactctagact
ctactattacacattagagggagac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_81017421_81018553
seq2: B6Ng01-162P13.b_48_1188 (reverse)

seq1  CATC-TTCTTCATTTTGAGG-TTTATTTATTCTGAAATGG-ACCCTGTAT  47
      |||| |||||| |||||||| |||||| |||| ||||||| |||||||||
seq2  CATCTTTCTTCCTTTTGAGGTTTTATTAATTCGGAAATGGAACCCTGTAT  50

seq1  --CGGAATAACTACAT-AAAAATAATCTATTTTAAACTAAT-CTTGATTG  93
         ||||||||||||| |||||||||||||||| ||||||| || |||||
seq2  TCGGGAATAACTACATAAAAAATAATCTATTTTTAACTAATCCTGGATTG  100

seq1  TTAG-AGACAGCTCAGTGGTAGTCTTGAGTCTAATAAGTAGCATAGCAAA  142
      |||| | | |||||||||||||||||||||||||| ||||||||||||||
seq2  TTAGAAAAAAGCTCAGTGGTAGTCTTGAGTCTAAT-AGTAGCATAGCAAA  149

seq1  ATAAAGAAACAATTAAATAAATAGATACATAAATAAGTCTTGATAAAACA  192
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAGAAACAATTAAATAAATAGATACATAAATAAGTCTTGATAAAACA  199

seq1  CTCTTCTTTGTATCC-AAGAACATTATGATTCTACAATGCTGGTCTCAAG  241
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  CTCTTCTTTGTATCCAAAGAACATTATGATTCTACAATGCTGGTCTCAAG  249

seq1  TACAGTGTTTCATTCCCTGCCAGTTTCCAGGCCAATGTGGCCTAATAAAT  291
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGTGTTTCATTCCCTGCCAGTTTCCAGGCCAATGTGGCCTAATAAAT  299

seq1  ATTTTTGTCCTTGTACATAATGTTTTCCTGTAGGAAACCTATTTGATGGG  341
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTGTCCTTGTACATAATGTTTTCCTGTAGGAAACCTATTTGATGGG  349

seq1  CTCTTTAATAAATGCACCTTAAAATGGTTAAACTTGTTGTTAGTCTGGAC  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTTAATAAATGCACCTTAAAATGGTTAAACTTGTTGTTAGTCTGGAC  399

seq1  ATATTGTTAGTACTTCAGGAAGTTTGAATTCAGGATGTTCTACTATTTAA  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTGTTAGTACTTCAGGAAGTTTGAATTCAGGATGTTCTACTATTTAA  449

seq1  AAACTTGCTATTTCTCTTTGGAATCATAGTCTCTGAAGCATTGGGAATCT  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTTGCTATTTCTCTTTGGAATCATAGTCTCTGAAGCATTGGGAATCT  499

seq1  TAAAATCCTAGTGGCAAATTTTCTCACCATTAAGAGAGCTTGTCTAATTG  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATCCTAGTGGCAAATTTTCTCACCATTAAGAGAGCTTGTCTAATTG  549

seq1  TGAAACTAGGGTAATGAAAAAAGGAACCAAGACTCTCTGTGTGTGTGTGC  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAACTAGGGTAATGAAAAAAGGAACCAAGACTCTCTGTGTGTGTGTGC  599

seq1  GTGTGTGTGTTTGTGGTGTGGTAGTTTCAGTAGCTTTTGAGTGGCTATAT  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTGTTTGTGGTGTGGTAGTTTCAGTAGCTTTTGAGTGGCTATAT  649

seq1  ATATATATATATATATATATGCCTATAGATGTTTAGTTACATGAAGAAAG  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATATATATATATATATGCCTATAGATGTTTAGTTACATGAAGAAAG  699

seq1  GCATTTCTATAATACTTACATGGATTGAGCTAACTGCTATTGTCAGAGTT  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTTCTATAATACTTACATGGATTGAGCTAACTGCTATTGTCAGAGTT  749

seq1  ATAATTAATAATTATACCGTCTTTTAATGAATACATTATTAGATAAATAC  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATTAATAATTATACCGTCTTTTAATGAATACATTATTAGATAAATAC  799

seq1  TATAGTAAATGAAATGGAAATGGATAGGGATATTTACCTGCTGCCATTTT  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGTAAATGAAATGGAAATGGATAGGGATATTTACCTGCTGCCATTTT  849

seq1  ATAGTTGAGCATTCTGAGACCCTAGTCTCTGACTCTTGGGAAATAGTTGT  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTTGAGCATTCTGAGACCCTAGTCTCTGACTCTTGGGAAATAGTTGT  899

seq1  ATCTTCTAGGTACTGTAAAAATGAGCAACAATTGACAAATGAGACCTCAT  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTCTAGGTACTGTAAAAATGAGCAACAATTGACAAATGAGACCTCAT  949

seq1  GAAATTACAAGTTTCTGTAAGAGAAAGGACACTGTCAGTGGGACAAAACA  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATTACAAGTTTCTGTAAGAGAAAGGACACTGTCAGTGGGACAAAACA  999

seq1  GTAACAGCTTGGGAAAGATCTTTACTAACCCTACATTGAATAGAGGGCTA  1041
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAACAGCTTGGGAAAGATCTTTACTAACCCTACATTGAATAGAGGGCTA  1049

seq1  ATATCCAAAATACACAAAGAACTCACAAGTTAGACTCCAGAAAAACAAAT  1091
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCCAAAATACACAAAGAACTCACAAGTTAGACTCCAGAAAAACAAAT  1099

seq1  AACCCAATTTAAAAATGGGGTACAGAGCTAAACAAAGAATTC  1133
      ||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCAATTTAAAAATGGGGTACAGAGCTAAACAAAGAATTC  1141

seq1: chr2_80874559_80875691
seq2: B6Ng01-162P13.g_69_1193

seq1  GAATTCTTGCTTTACCCCAAAGCTTCAGTGGTCTAAAATTCACAGTATAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTGCTTTACCCCAAAGCTTCAGTGGTCTAAAATTCACAGTATAA  50

seq1  AAATGACTACAAAATTCTGCTTTTAATGACTTTGAGCTGGAAGGGTGGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGACTACAAAATTCTGCTTTTAATGACTTTGAGCTGGAAGGGTGGAG  100

seq1  ATGAAATGCAACAAGATCCATGTATAAGTCAGGAGTAGAAAGAGTATTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAATGCAACAAGATCCATGTATAAGTCAGGAGTAGAAAGAGTATTGT  150

seq1  AGCTGATACTGGAAGAAAGATATTTAGCCGTCATGGAGATCACTGTCTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGATACTGGAAGAAAGATATTTAGCCGTCATGGAGATCACTGTCTCC  200

seq1  GGGCCAGTATCTCTAAACTGTGCCTGACTTTACCTAAGGGTGCATGTTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCCAGTATCTCTAAACTGTGCCTGACTTTACCTAAGGGTGCATGTTTC  250

seq1  TCACTCTCTGCTATGCAGATGAACTTAGCCTGGGCTATGGGAATTTTTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTCTCTGCTATGCAGATGAACTTAGCCTGGGCTATGGGAATTTTTCA  300

seq1  GAATTCCATAGGTGATTTTAATTTGCATCTACAATTAACTACGGGTGTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATAGGTGATTTTAATTTGCATCTACAATTAACTACGGGTGTTC  350

seq1  CTGACATCTGTATAAAAGGTTTTTATTCTTAAGGTGTATGTGAATCATCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACATCTGTATAAAAGGTTTTTATTCTTAAGGTGTATGTGAATCATCA  400

seq1  TATGGTTAACAAACGCCAAAAATTGTACCTTACCCCTTGACATTTCTGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGTTAACAAACGCCAAAAATTGTACCTTACCCCTTGACATTTCTGTT  450

seq1  GAAATGCTCTGAGATGGCACCGCATGTTTCTGAAGCATCTCGGGTGCTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATGCTCTGAGATGGCACCGCATGTTTCTGAAGCATCTCGGGTGCTTC  500

seq1  CCATGTGAAAATAGGTATTCCAGAATATTGGCAAGGCTCAGTCTGAATGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGTGAAAATAGGTATTCCAGAATATTGGCAAGGCTCAGTCTGAATGC  550

seq1  CCCAGAGTACAGGGTGCTGAATGTGGCAGAAAAAAAAGAGAGATAGCAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGAGTACAGGGTGCTGAATGTGGCAGAAAAAAAAGAGAGATAGCAGA  600

seq1  GATACAACATTGAATGCACAAGAATCAAGGACATGGAATCTCAGTACTGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATACAACATTGAATGCACAAGAATCAAGGACATGGAATCTCAGTACTGA  650

seq1  TGTCTTATCTGGACTCATAGGTTCCTTGAGCCTAGGACTAAAGGAAAGAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTTATCTGGACTCATAGGTTCCTTGAGCCTAGGACTAAAGGAAAGAG  700

seq1  TGTGGAATTACAAACCAGCTTCTGAATTGCATCCATTTCCAGAAGAGTTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGAATTACAAACCAGCTTCTGAATTGCATCCATTTCCAGAAGAGTTG  750

seq1  ATGATGTGGAAATTTGCCTTTGGAAATTTTGTTTTATCACAAGTAAAAAT  800
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  ATGATGTGGAAATTTGCCTTTGGAAATTTTGTTTTATCACAAGT-AAAAT  799

seq1  ATAAGATACCAAGGGATATTCAAATTGTAGATAAAGAACAAGTACTTTTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGATACCAAGGGATATTCAAATTGTAGATAAAGAACAAGTACTTTTT  849

seq1  ATGAGTAATACATCCTGTGTGATTCGAATATATTTGTATTAAATAATATG  900
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  ATGAGTAATACATCCTGTGTGATTCGAATATATTTGTA-TAAATAATATG  898

seq1  TCATTTGGTAGAAATGGAAACTCAATTGGGACTCTGCATTTTATTTGATA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTGGTAGAAATGGAAACTCAATTGGGACTCTGCATTTTATTTGATA  948

seq1  AATCTTAGAAAGCTAGAATTTATTGAATTCTCAAAGGACAGTGTGATCTT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTTAGAAAGCTAGAATTTATTGAATTCTCAAAGGACAGTGTGATCTT  998

seq1  GGTGCTGTATTTTAACTGTATAGAGCATCCACCATCAGTCCTGAGGGACA  1050
      ||||||||||||||||||||||||||||||||||||||| |||| |||||
seq2  GGTGCTGTATTTTAACTGTATAGAGCATCCACCATCAGT-CTGA-GGACA  1046

seq1  GCCTGATGGCATGAATATCTAAGACTGTTTTTTCTTCTCTTTTAAGACTC  1100
      ||||||||||||| |||||| ||||||||||||||||||||| |  ||||
seq2  GCCTGATGGCATG-ATATCT-AGACTGTTTTTTCTTCTCTTTAAGAACTC  1094

seq1  TAGACTCTACTATTTACACAATAAGAGGGAGAC  1133
      |||||||||||| |||||| || ||||||||||
seq2  TAGACTCTACTA-TTACAC-ATTAGAGGGAGAC  1125