BAC Information

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BAC

Clone NameB6Ng01-163N06
Chromosome2 (Build37)
Map Location 142,776,812 - 142,777,698
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC668913, LOC668914, Kif16b
Downstream geneSnrpb2, Otor, LOC668915, LOC668916, Pcsk2, Bfsp1, LOC100043799, LOC100043534, Dstn, Rrbp1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-163N06.bB6Ng01-163N06.g
ACCDH956316DH956317
length9551,193
definitionDH956316|Mus musculus domesticus DNA, BAC clone: B6Ng01-163N06, 5' end.DH956317|Mus musculus domesticus DNA, BAC clone: B6Ng01-163N06, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatctttcagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacacgataacaaccagttgaggcaggcactattagtgtggcc
tttttggagtaggtatggccttgttggaggaactatgtgactgtggaggt
gggcttgctgctcttctatgtgcaagttgcacaactctgttacacaatca
atccccttctgctgcctgctgatcaagatatacaactcctagtttctttt
tttgtttgatacctcatgacatgatattattgaacatggatatataaaga
gatacatatgtgacacatcaatgcacattctgaaacaaactgtagacaaa
tatactcacagcagaggtgaaaaactctgaccacacagaaaattgtaagt
acaagaaataaataatacatgatgagttttcagtatttcttgtattgtct
cttaatgtacattatttattaatttggagctacataatgtaactttttat
tagttgtttttcatttgcatttcaaatgttatcccctttcctagtttccc
ttccgaaaacccccttattcatacccagccccttctcaataacccaccca
ttccc
gaattccttgatacacttagacttgagcttagtataatgagataagaata
gatctatttgcattcttctacatgataaccacaagttgtgccttgaaaat
gctgtctttttttccactggatggttttagctctcttgttaaagatcaag
tgactataagtgtttgggttcatttctgtatcttcaattctattctgtag
gtctacctgtctgtcattgtaccagtaccatgtagtttttatcacaattg
ctctgtagtacagcttaaggtcaggtatggtgatttcatcagaggttttt
atatcattgagaatagcttttgctatcctaggttttttattattccagat
gaatttgcaaattgccctttctaattcattcaagaatttatttggaattt
taatggggattgcattgaatctttagattgctttctgcaaaatagccatt
tttacaatattgatcctgccaatccatgaccatgagagatctttccatct
tctgagatcttctttaatttctttcttcagagacttgaagttcttatcat
acagatttttcacttccttagttagagttacaccaaggtatttcgtatta
tttatgactattgtgaacggtgttgtttccctaatttctttttcaacctg
tttatcctttgtgtagagaaaggtcatttatttgtttgagttaattttat
atccagctatttcactgaagttgttcatcaggtataggagttctttggtg
gaatttttatagtcacttatatatactaatatatcatctgcaaatagtga
tattttgacttcttcctttccaatttgtatcttgttgacctccttttctt
gactaattgctctggctagatcttcagggagaaagtgggcagccttgtct
attccctaattttagtgagatcgcttctatcttctctccatttaggttga
tgttggctactggttgctgtaaattgctttattatgtttaagtatgggtt
ttgaatcctgaccttccaggttttttcaagaatgggggttggattttgtc
aaatgcctcctcaaatccataaagaagaatcagaggaatttgtcttgagt
tgtttacaaggaatatgagggatttccaatataaacaccctgcattcggg
atgaccacttaaaacggttacaagatggttgaggaggttctcg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_142776812_142777698
seq2: B6Ng01-163N06.b_46_472 (reverse)

seq1  CAACTGGTTGTTATCATGTAGAAGAATGGGAATCGATCCATACTTATCTC  50
                                                        
seq2  --------------------------------------------------  0

seq1  CTTGTACTAAGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACCA  100
                                                        
seq2  --------------------------------------------------  0

seq1  GAGACACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATAT  150
                                                        
seq2  --------------------------------------------------  0

seq1  GGGCACAGGGGACAAATTCCTGAACAGAACAGCAATGGCTTGTGCTGTAA  200
                                                        
seq2  --------------------------------------------------  0

seq1  GATCGAGAATTGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAAG  250
                                                        
seq2  --------------------------------------------------  0

seq1  GCAAAAGACACCGTCAATAAGACAAAAAGACCACCAACAGATTGGGAAAG  300
                                                        
seq2  --------------------------------------------------  0

seq1  GATCTTTACCTATCCTAAATCAGATAGGGGACTAATATCCAACATATATA  350
                                                        
seq2  --------------------------------------------------  0

seq1  AAGAACTCAAGAAGGTGGACTTCAGAAAATCAAATAACCCCATTAAAAAA  400
                                                        
seq2  --------------------------------------------------  0

seq1  TGGGGCTCACAAAACCATCCAGTGGAAGAAAGACAGCATTTTCAACAATT  450
                                                        
seq2  --------------------------------------------------  0

seq1  GGTGCTGGCACAACTGGTTGTTATCATGTAGAAGAATGCGAATCGATCCA  500
                ||||||||||||||| ||||||||||||||||||||||||
seq2  ----------CAACTGGTTGTTATCGTGTAGAAGAATGCGAATCGATCCA  40

seq1  TACTTATCTCCTTGTACTAAGGTCAAATCTAAGTGGATCAAGGAACTTCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTATCTCCTTGTACTAAGGTCAAATCTAAGTGGATCAAGGAACTTCA  90

seq1  CATAAAACCAGAGACACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAAACCAGAGACACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCC  140

seq1  TTGAAGATATGGGCACAGGGGAAAAATTCCTGAACAGAAGAGCAATGGCT  650
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  TTGAAGATATGGGCACAGGGGAAAAATTCCTGAACAGAACAGCAATGGCT  190

seq1  TGTGCTGTAAGATCGAGAATTGACAAATGGGACCTAATGAAACTCCAAAG  700
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCTGAAAGATCGAGAATTGACAAATGGGACCTAATGAAACTCCAAAG  240

seq1  TTTCTGCAAGGCAAAAGACACTGTCTATAAGACAAAAAGACCACCAACAG  750
      ||||||||||||||||||||| ||| ||||||||||||||||||||||||
seq2  TTTCTGCAAGGCAAAAGACACCGTCAATAAGACAAAAAGACCACCAACAG  290

seq1  ACTGGGAAAGGATCTTTACCTATCCTAAATCAGATAGGGGACTAATATCC  800
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGGAAAGGATCTTTACCTATCCTAAATCAGATAGGGGACTAATATCC  340

seq1  AACATATATAAAGAACTCAAGAAGGTGGACCTCAGAAAATCAAATAACCC  850
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  AACATATATAAAGAACTCAAGAAGGTGGACTTCAGAAAATCAAATAACCC  390

seq1  CATTAAAAAATGGGGCTCAGAACTGAACAAAGAATTC  887
      |||||||||||||||||||||||||||||||||||||
seq2  CATTAAAAAATGGGGCTCAGAACTGAACAAAGAATTC  427