BAC Information

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BAC

Clone NameB6Ng01-164A20
Chromosome2 (Build37)
Map Location 64,763,357 - 64,764,516
singlet/doubletsinglet
Overlap geneGrb14
Upstream geneFign, LOC620544, LOC667291
Downstream geneCobll1, LOC383705, 9330158F14Rik, Scn3a, Scn2a1, A330102K23Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-164A20.bB6Ng01-164A20.g
ACCDH956481DH956482
length1,1721,137
definitionDH956481|Mus musculus domesticus DNA, BAC clone: B6Ng01-164A20, 5' end.DH956482|Mus musculus domesticus DNA, BAC clone: B6Ng01-164A20, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaaccaagggataccgaagggctgagaatcgtctgaaaaaaat
gtccaacatccttaatcatcagggaaattcaaatcaaaacaaccctgaga
tactaccttacaccagtaagaatggctatgatcaaaaattgatgacagca
gatgttagcaaggatgtggagaaagaggaacactcctccattgctgttgg
gagtgcaagattgcacaaccactctggaaatcagtctggcagttcctcag
aaaactggacataatactaccagtagatccagcaatacctctcctaggca
tatacccagaagatgttccaactggcaataaggacacatgcaccactatg
ttcctagcagccctatttataatagccagaagctgagaagaacccagatg
tccctcaacagaggaatggatacagaaaatgtgatacatttacacaatgg
agtactactcagctattaaaaacaattaatttatgaaattcctagccaaa
tggatgtatctagaggatatcctgagtgaggtaacccaatcaaaaaagaa
gtcacttgatatgcactcactgataagtggatatttgcccagaaacctag
aatacccaagatacaacttccaaaacacaagaaaatcaagaaggaagacc
aacttgtggatacttcattcctccctagaatagggaataaaatatccata
gaaggagttgcagagacaaagtttagagctaaacgaaagtatgaaccatc
cagagactgccacacccaggggtccatcccataatcagtcaccaaatgca
gacacttttgcatacaccagcaagattttgttgagaggacccggatatag
ctgtctcctgtgaggctttgctattgcctggcaaatacagaagtagatgc
tcacagtcatctataggatgaaacacagggtccccaatgtaggagctaga
gaaagtatccagagctgaaagggtcttgcaactctatagatggagcaaca
tataaactaatcagtacccccataacttgtgtccctagctgcatatgtag
cagaagatggctagtcgcatcatgggagagaggacctgtcttagcaactt
ttatgtgcagacaggggaaatcaggctaagattggaattgatgggttagg
ggacatggtcgatgtgggagtt
gaattcattctgaagttaagattccttgttcaacttttctattcagtttc
catatcggacaggataccccacccccagttcctctattagttcaggaaac
agttttgcgcaggcaggcagacaagtgtgtcataagcccacacttgtcct
taggagacagagtgaggcacagggcttggcctaagcaggcagagtatgtg
aaagaaggtgacccagacagggaaacccaccacccttgaagccatatttt
aaataagagactgagccaggtagggagaggcccaagctctactctggccc
tgggctgtgatgccgaagccagttcaaggcttcccaggccaaagatgcag
gtatcatgtatctgatagttggacatcaactactctaggaggtagctatg
gcattgctcactcttcttttcagagtggaacagataagagctgatgatct
tcagcttagagttgatggtgtagtctagagtctctgcctgcctatgcctt
cctgtccagatccatactgtttctcagcactgttgcctcggatactgcag
gagccattcagaggcaattgctgtgacataagctggcactaggaaagagg
cagaggcctatgttagaatccagttgctaggacctaacctgggttcattg
cagctccatgcaatggtgatgtttgaagagtgtgatgaaataaattagta
aaactgtccgtcccattgttttccttcctttagcaaagtggcgaattcaa
ggggaaagcagccaagtttgcatgcttgctcctcacactgataatcctgg
cccaccgtcccatggtagttcattctccatgatactgtctcctgaaagta
aagacactactgtcttttattttatgagaaatggtccctctctgcctgaa
tccaagtgattccccactaacttgatgcatgagtaaaaataaatgctata
gagtacctgaattaaaatgggtgggacgatatttcaacgatgagcattta
acattgggaggacacaagtcactagacacatggattcctagacccatgtt
gagcagtgctcgaggaattgcattgtatagcaacgctgggaagcagagga
ccttgtaagacagctcttggaaaggcagcgcttaagc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_64763357_64764516
seq2: B6Ng01-164A20.g_63_1199 (reverse)

seq1  GCTTAAGCGTGCCTCTGCC-TTCCCAGAGCTGCTCTTACAAATGTCCTCT  49
      |||||||||     ||||| |||| ||||||| |||||| || |||||||
seq2  GCTTAAGCG-----CTGCCTTTCCAAGAGCTG-TCTTAC-AAGGTCCTCT  43

seq1  GCCTTCCCAGCGCTGCTATTACAAATGCATGTCCTCGAGCCAACCTTGCT  99
      | |||||||||| ||||| ||| ||||||  |||||||||  ||  ||||
seq2  G-CTTCCCAGCGTTGCTA-TAC-AATGCAATTCCTCGAGC--AC--TGCT  86

seq1  C-ACATGGGTTCTAGGGATTCCATGTGTCTAGTGACTGTGGTCCTCCCAA  148
      | ||||||| |||| ||| ||||||||||||||||||   ||||||||||
seq2  CAACATGGG-TCTA-GGAATCCATGTGTCTAGTGACTTGTGTCCTCCCAA  134

seq1  TGGTAAAATTGCTTCATCCGTTGAAATATCGTCCCACCCATTTTTAATTC  198
      || ||||  ||| |||| |||||||||||||||||||||| |||||||||
seq2  TGTTAAA--TGC-TCAT-CGTTGAAATATCGTCCCACCCA-TTTTAATTC  179

seq1  AGGTACTCTTATAGCATTTATTTTTTACTTCATGCATCAAGTTAGTGGGG  248
      |||||||| ||||||||||| ||||||| |||||||||||||||||||||
seq2  AGGTACTC-TATAGCATTTA-TTTTTAC-TCATGCATCAAGTTAGTGGGG  226

seq1  AATCACTTGGATTTCAGGCAGAGAGGGACCATTTCTCATAAAATAAAAGA  298
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  AATCACTTGGA-TTCAGGCAGAGAGGGACCATTTCTCATAAAATAAAAGA  275

seq1  CAGTAGTGTCTTTACTTTCAGGAGACAGTATCATGGAGAATGAACTACCA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTAGTGTCTTTACTTTCAGGAGACAGTATCATGGAGAATGAACTACCA  325

seq1  TGGGACGGTGGGCCAGGATTATCAGTGTGAGGAGCAAGCATGCAAACTTG  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGACGGTGGGCCAGGATTATCAGTGTGAGGAGCAAGCATGCAAACTTG  375

seq1  GCTGCTTTCCCCTTGAATTCGCCACTTTGCTAAAGGAAGGAAAACAATGG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCTTTCCCCTTGAATTCGCCACTTTGCTAAAGGAAGGAAAACAATGG  425

seq1  GACGGACAGTTTTACTAATTTATTTCATCACACTCTTCAAACATCACCAT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACGGACAGTTTTACTAATTTATTTCATCACACTCTTCAAACATCACCAT  475

seq1  TGCATGGAGCTGCAATGAACCCAGGTTAGGTCCTAGCAACTGGATTCTAA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATGGAGCTGCAATGAACCCAGGTTAGGTCCTAGCAACTGGATTCTAA  525

seq1  CATAGGCCTCTGCCTCTTTCCTAGTGCCAGCTTATGTCACAGCAATTGCC  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGGCCTCTGCCTCTTTCCTAGTGCCAGCTTATGTCACAGCAATTGCC  575

seq1  TCTGAATGGCTCCTGCAGTATCCGAGGCAACAGTGCTGAGAAACAGTATG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAATGGCTCCTGCAGTATCCGAGGCAACAGTGCTGAGAAACAGTATG  625

seq1  GATCTGGACAGGAAGGCATAGGCAGGCAGAGACTCTAGACTACACCATCA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTGGACAGGAAGGCATAGGCAGGCAGAGACTCTAGACTACACCATCA  675

seq1  ACTCTAAGCTGAAGATCATCAGCTCTTATCTGTTCCACTCTGAAAAGAAG  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTAAGCTGAAGATCATCAGCTCTTATCTGTTCCACTCTGAAAAGAAG  725

seq1  AGTGAGCAATGCCATAGCTACCTCCTAGAGTAGTTGATGTCCAACTATCA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAGCAATGCCATAGCTACCTCCTAGAGTAGTTGATGTCCAACTATCA  775

seq1  GATACATGATACCTGCATCTTTGGCCTGGGAAGCCTTGAACTGGCTTCGG  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATACATGATACCTGCATCTTTGGCCTGGGAAGCCTTGAACTGGCTTCGG  825

seq1  CATCACAGCCCAGGGCCAGAGTAGAGCTTGGGCCTCTCCCTACCTGGCTC  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCACAGCCCAGGGCCAGAGTAGAGCTTGGGCCTCTCCCTACCTGGCTC  875

seq1  AGTCTCTTATTTAAAATATGGCTTCAAGGGTGGTGGGTTTCCCTGTCTGG  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTCTTATTTAAAATATGGCTTCAAGGGTGGTGGGTTTCCCTGTCTGG  925

seq1  GTCACCTTCTTTCACATACTCTGCCTGCTTAGGCCAAGCCCTGTGCCTCA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACCTTCTTTCACATACTCTGCCTGCTTAGGCCAAGCCCTGTGCCTCA  975

seq1  CTCTGTCTCCTAAGGACAAGTGTGGGCTTATGACACACTTGTCTGCCTGC  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTCTCCTAAGGACAAGTGTGGGCTTATGACACACTTGTCTGCCTGC  1025

seq1  CTGCGCAAAACTGTTTCCTGAACTAATAGAGGAACTGGGGGTGGGGTATC  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCGCAAAACTGTTTCCTGAACTAATAGAGGAACTGGGGGTGGGGTATC  1075

seq1  CTGTCCGATATGGAAACTGAATAGAAAAGTTGAACAAGGAATCTTAACTT  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCCGATATGGAAACTGAATAGAAAAGTTGAACAAGGAATCTTAACTT  1125

seq1  CAGAATGAATTC  1160
      ||||||||||||
seq2  CAGAATGAATTC  1137