BAC Information

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BAC

Clone NameB6Ng01-164D02
Chromosome2 (Build37)16 (Build37)
Map Location 69,058,831 - 69,059,97661,276,425 - 61,276,493
singlet/doubletsingletsinglet
Overlap geneG6pc2
Upstream geneStk39, LOC100039683, Gm1323, 4933409G03Rik, 4932414N04Rik, LOC667443, Lass6, Nostrin, Spc25
Downstream geneAbcb11, Dhrs9, Lrp2, Bbs5, Kbtbd10, Fastkd1, Ppig, 4930578N16Rik, Phospho2, LOC433432, Klhl23, Ssb, Mettl5, 4930550G17Rik, Zfp650, Myo3b
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-164D02.bB6Ng01-164D02.g
ACCDH956581DH956582
length1,149128
definitionDH956581|Mus musculus domesticus DNA, BAC clone: B6Ng01-164D02, 5' end.DH956582|Mus musculus domesticus DNA, BAC clone: B6Ng01-164D02, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(69,058,831 - 69,059,976)(61,276,425 - 61,276,493)
sequence
gaattctttctctctcattccataccctgtgaaaaacatttcacaaagtt
ttaggataaagcaaatgagcatttcagccacttccccagttttccattga
tccacccacctacttatataaataagaaatacatttaatccttggctaat
aggacatacagtctgagctgccagatatttaaagaattaactgtgatatt
ataaatactgttaaagatgtatgtatacttttatggaagcaaaggaagat
attcagaaaattcattaggagctcatacatttaaggtttgtttcaaagga
ctgtctaatggcaccaattttacaactacaacgtaacacatgacaactct
ttcacataggctaaagcaatagcatcgtcccatatatatgaatatacatg
aactttttactctcttaaagttgacttctacaatatagatgttatactta
atacacagggtcttctaagttgaaaagttagtaggactaggaagctctac
taacatagtacacaataaagaacaataaagagtgaaaaagaatgttagcg
gccatgtgttctggcagcgggagtacaaggaagtcttcacctttcttata
agacatctgtctcttccttatttgtgagattctcagaagagccagggcca
tgaagctgctgagcagcagacaaatcaatgtttctagaaccctaatgtag
ttcttggagaatttgttctagcttcttggttttttttttgtttgtttgtt
tgtttgttttcatacccaaccattatatctctccaaaacaataaataccc
aagtataaaatgatttgggaagtgttcttctcacctaatctttcacaagt
aacaatatagaatttggtaattcataaaatttctttccttcctcaaagta
gcaatttttacaatacactttaagcatccttacccatgacatttaccttg
agatcctagatatcatacgattataggatgctaatcgtgacccccttcag
taaagtgaggcttctttaactgcttacctggggcctgtttcacaccgtag
taggaaactgcctcagacatgggccttgatgattggataaatcctcagtt
ccttgtatcacccaggtaagacgatgggccaaacaatatcctgtgagta
agtagtgttcattctgtttctattttgtggaatcgttttcaggagtattg
gtattacctcttctttgaaggtctggtagaatcctgcactaaaaccatct
gactgtaggcttttttgtggggaggggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_69058831_69059976
seq2: B6Ng01-164D02.b_45_1193 (reverse)

seq1  TACTCACAGGATATTGTTTGG-CCATCGTCCTTACTGGTGGATACAAGAA  49
      ||||||||||||||||||||| |||||||| |  ||||  |||||||| |
seq2  TACTCACAGGATATTGTTTGGCCCATCGTCTTACCTGGGTGATACAAGGA  50

seq1  ACTGA-GATTTATCCAAATCATTCAAGCCCATGTCTTGAGCAGTTTCCTA  98
      ||||| ||||||||| ||||||  | ||||||||||   |||||||||||
seq2  ACTGAGGATTTATCC-AATCATCAAGGCCCATGTCTGAGGCAGTTTCCTA  99

seq1  CTAC-GTGTGAAACAGG-CCCAGGTAAGCAGTTAAAGAAGCCTCACTTTA  146
      |||| |||||||||||| ||||||||||||||||||||||||||||||||
seq2  CTACGGTGTGAAACAGGCCCCAGGTAAGCAGTTAAAGAAGCCTCACTTTA  149

seq1  CTGAAGGGAGTCACGATTAGCATCCTATAATCGTATGATATCTAGGATCT  196
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAGGGGGTCACGATTAGCATCCTATAATCGTATGATATCTAGGATCT  199

seq1  CAAGGTAAATGTCATGGGTAAGGATGCTTAAAGTGTATTGTAAAAATTGC  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGTAAATGTCATGGGTAAGGATGCTTAAAGTGTATTGTAAAAATTGC  249

seq1  TACTTTGAGGAAGGAAAGAAATTTTATGAATTACCAAATTCTATATTGTT  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTTGAGGAAGGAAAGAAATTTTATGAATTACCAAATTCTATATTGTT  299

seq1  ACTTGTGAAAGATTAGGTGAGAAGAACACTTCCCAAATCATTTTATACTT  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGTGAAAGATTAGGTGAGAAGAACACTTCCCAAATCATTTTATACTT  349

seq1  GGGTATTTATTGTTTTGGAGAGATATAATGGTTGGGTATGAAAACAAACA  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTATTTATTGTTTTGGAGAGATATAATGGTTGGGTATGAAAACAAACA  399

seq1  AACAAACAAACAAAAAAAAAACCAAGAAGCTAGAACAAATTCTCCAAGAA  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAACAAACAAAAAAAAAACCAAGAAGCTAGAACAAATTCTCCAAGAA  449

seq1  CTACATTAGGGTTCTAGAAACATTGATTTGTCTGCTGCTCAGCAGCTTCA  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACATTAGGGTTCTAGAAACATTGATTTGTCTGCTGCTCAGCAGCTTCA  499

seq1  TGGCCCTGGCTCTTCTGAGAATCTCACAAATAAGGAAGAGACAGATGTCT  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCCTGGCTCTTCTGAGAATCTCACAAATAAGGAAGAGACAGATGTCT  549

seq1  TATAAGAAAGGTGAAGACTTCCTTGTACTCCCGCTGCCAGAACACATGGC  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAGAAAGGTGAAGACTTCCTTGTACTCCCGCTGCCAGAACACATGGC  599

seq1  CGCTAACATTCTTTTTCACTCTTTATTGTTCTTTATTGTGTACTATGTTA  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCTAACATTCTTTTTCACTCTTTATTGTTCTTTATTGTGTACTATGTTA  649

seq1  GTAGAGCTTCCTAGTCCTACTAACTTTTCAACTTAGAAGACCCTGTGTAT  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGAGCTTCCTAGTCCTACTAACTTTTCAACTTAGAAGACCCTGTGTAT  699

seq1  TAAGTATAACATCTATATTGTAGAAGTCAACTTTAAGAGAGTAAAAAGTT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTATAACATCTATATTGTAGAAGTCAACTTTAAGAGAGTAAAAAGTT  749

seq1  CATGTATATTCATATATATGGGACGATGCTATTGCTTTAGCCTATGTGAA  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTATATTCATATATATGGGACGATGCTATTGCTTTAGCCTATGTGAA  799

seq1  AGAGTTGTCATGTGTTACGTTGTAGTTGTAAAATTGGTGCCATTAGACAG  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTTGTCATGTGTTACGTTGTAGTTGTAAAATTGGTGCCATTAGACAG  849

seq1  TCCTTTGAAACAAACCTTAAATGTATGAGCTCCTAATGAATTTTCTGAAT  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTGAAACAAACCTTAAATGTATGAGCTCCTAATGAATTTTCTGAAT  899

seq1  ATCTTCCTTTGCTTCCATAAAAGTATACATACATCTTTAACAGTATTTAT  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTCCTTTGCTTCCATAAAAGTATACATACATCTTTAACAGTATTTAT  949

seq1  AATATCACAGTTAATTCTTTAAATATCTGGCAGCTCAGACTGTATGTCCT  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATCACAGTTAATTCTTTAAATATCTGGCAGCTCAGACTGTATGTCCT  999

seq1  ATTAGCCAAGGATTAAATGTATTTCTTATTTATATAAGTAGGTGGGTGGA  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGCCAAGGATTAAATGTATTTCTTATTTATATAAGTAGGTGGGTGGA  1049

seq1  TCAATGGAAAACTGGGGAAGTGGCTGAAATGCTCATTTGCTTTATCCTAA  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATGGAAAACTGGGGAAGTGGCTGAAATGCTCATTTGCTTTATCCTAA  1099

seq1  AACTTTGTGAAATGTTTTTCACAGGGTATGGAATGAGAGAGAAAGAATTC  1146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTTGTGAAATGTTTTTCACAGGGTATGGAATGAGAGAGAAAGAATTC  1149

seq1: chr16_61276425_61276493
seq2: B6Ng01-164D02.g_82_151 (reverse)

seq1  TTCTATCAGACCTTCAAAGAAGATCTAATCCCAGTTCTTC-ACAAACTAT  49
      ||||| |||||||||||||||||  |||| ||| | || |   |||| ||
seq2  TTCTACCAGACCTTCAAAGAAGAGGTAATACCAATACTCCTGAAAACGAT  50

seq1  TCCACAAAATAGAAACAGAA  69
      ||||||||||||||||||||
seq2  TCCACAAAATAGAAACAGAA  70