BAC Information

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BAC

Clone NameB6Ng01-164F10
Chromosome2 (Build37)7 (Build37)
Map Location 142,776,686 - 142,777,698110,645,724 - 110,646,719
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC668913, LOC668914, Kif16b
Downstream geneSnrpb2, Otor, LOC668915, LOC668916, Pcsk2, Bfsp1, LOC100043799, LOC100043534, Dstn, Rrbp1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-164F10.bB6Ng01-164F10.g
ACCDH956691DH956692
length840982
definitionDH956691|Mus musculus domesticus DNA, BAC clone: B6Ng01-164F10, 5' end.DH956692|Mus musculus domesticus DNA, BAC clone: B6Ng01-164F10, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(142,776,686 - 142,777,698)(110,645,724 - 110,646,719)
sequence
gaattctttgttcagttctgagccccatttttcaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttagatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctagatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttcttctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacatgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttcaactggatggttttggctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattctacttt
ggtctttataccagtaccatgcagtttttatcacaattgctttgtagtaa
agctttaggtcaggcatggtgattccaccagaggttcttttatccttgag
aagagtttttgctatcctaggttttttgttattccagatgaatttacaaa
ttgctcctttctaatttgttgaagaattgagttggaatttgatggggatt
gcattgaatctgtagatttcttttggcaagatagccatttttacattgtt
gttcctgccaatccatgagcatgggagatctttccatctt
gaattccatagcaccctaaagtgtttagaaagtagttaatgatttttaat
atttgtcttaatttctcctgttctacctttaagagattcaaggtgctttt
caaagatgatcattcgaagctatagaaagagctgcagccaacaggaagca
gtgtggatttatttactctggccatatttcttttgtcttccatcttaaaa
aaaaaaaaagaaaaagaagaagttaaactctttctgaaatcagcaactct
acctgaatattcttttcctaaaagtcttctcagttatagttcagatctgt
gaaggtgagtatagtaagacttccagatattagcaccatgtgttatgatt
catttaaggcaaggaattattgctggtggactatctatctatctatctat
ctatctatctatctatctatctatctatctatctatctatcaatcatcta
ttttacatttgactgtctgtctttgctaaaatcaagtatttgaaaaattc
attaagaaagacactcatctgttctaagatatctgcagcaggaaagtcct
ttgctttattttaaatagtcaattgtttttcttcatgtttgtagttcaaa
tgttttaacactgctattaatctctgaagatggatttagccctttggttg
tcaaaatccatattatttactcactcaaaaggaaacaaggacaaagaaca
tgtctcctcttcctcctcctcggcagtccagtggcaggagtattcagtga
agaataactttacaacgcattagccaatacccagggtgtcccttggatga
acacaacagggaccatgggtttggtggcaaccaatgactgacgatgcctt
tgaaaacagctttcttagtgctaaagagatcctgttgaattatagtcatg
tggctctcacatctgagtttttatgctgctggctaccctaaaggtagcta
aaatacctggcctgctaagaatcatactttat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_142776686_142777698
seq2: B6Ng01-164F10.b_49_603 (reverse)

seq1  AGACCAA--TGGAATAGAATTGAAGACCCAGAAATGAACCCACACACCTA  48
      |||||||  | |||||||||||||||||||||||||||||||||||||||
seq2  AGACCAAAGTAGAATAGAATTGAAGACCCAGAAATGAACCCACACACCTA  50

seq1  TGGTCACTTGATCTTCGACAAGGGAGCTAAAACCATCCAGAGGAAGAAAG  98
      ||||||||||||||||||||||||||| ||||||||||||  ||||||||
seq2  TGGTCACTTGATCTTCGACAAGGGAGCCAAAACCATCCAGTTGAAGAAAG  100

seq1  ACAGCATTTTCAACAATTGGTGCTGGCACAACTGGTTGTTATCATGTAGA  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCATTTTCAACAATTGGTGCTGGCACAACTGGTTGTTATCATGTAGA  150

seq1  AGAATGGGAATCGATCCATACTTATCTCCTTGTACTAAGGTCAAATCTAA  198
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATGCGAATCGATCCATACTTATCTCCTTGTACTAAGGTCAAATCTAA  200

seq1  GTGGATCAAGGAACTTCACATAAAACCAGAGACACTGAAACTTATAGAGG  248
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  GTGGATCAAGGAACTTCACATAAAACCAGAGACACTGAAACTTATAGAGA  250

seq1  AGAAAGTGGGGAAAAGCCTTGAAGATATGGGCACAGGGGACAAATTCCTG  298
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  AGAAAGTGGGGAAAAGCCTTGAAGATATGGGCACAGGGGAAAAATTCCTG  300

seq1  AACAGAACAGCAATGGCTTGTGCTGTAAGATCGAGAATTGACAAATGGGA  348
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  AACAGAACAGCAATGGCTTGTGCTGTAAGATCTAGAATTGACAAATGGGA  350

seq1  CCTAATGAAACTCCAAAGTTTCTGCAAGGCAAAAGACACCGTCAATAAGA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAATGAAACTCCAAAGTTTCTGCAAGGCAAAAGACACCGTCAATAAGA  400

seq1  CAAAAAGACCACCAACAGATTGGGAAAGGATCTTTACCTATCCTAAATCA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAAGACCACCAACAGATTGGGAAAGGATCTTTACCTATCCTAAATCA  450

seq1  GATAGGGGACTAATATCCAACATATATAAAGAACTCAAGAAGGTGGACTT  498
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  GATAGGGGACTAATATCTAACATATATAAAGAACTCAAGAAGGTGGACTT  500

seq1  CAGAAAATCAAATAACCCCATTAAAAAATGGGGCTCACAAAACCATCCAG  548
      |||||||||||||||||||||| |||||||||||||| ||          
seq2  CAGAAAATCAAATAACCCCATTGAAAAATGGGGCTCAGAA----------  540

seq1  TGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGCACAACTGGTTGTT  598
        ||| |||||    |||                                
seq2  CTGAACAAAGA----ATTC-------------------------------  555

seq1  ATCATGTAGAAGAATGCGAATCGATCCATACTTATCTCCTTGTACTAAGG  648
                                                        
seq2  --------------------------------------------------  555

seq1  TCAAATCTAAGTGGATCAAGGAACTTCACATAAAACCAGAGACACTGAAA  698
                                                        
seq2  --------------------------------------------------  555

seq1  CTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGGCACAGGGGA  748
                                                        
seq2  --------------------------------------------------  555

seq1  AAAATTCCTGAACAGAAGAGCAATGGCTTGTGCTGTAAGATCGAGAATTG  798
                                                        
seq2  --------------------------------------------------  555

seq1  ACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAAGGCAAAAGACACT  848
                                                        
seq2  --------------------------------------------------  555

seq1  GTCTATAAGACAAAAAGACCACCAACAGACTGGGAAAGGATCTTTACCTA  898
                                                        
seq2  --------------------------------------------------  555

seq1  TCCTAAATCAGATAGGGGACTAATATCCAACATATATAAAGAACTCAAGA  948
                                                        
seq2  --------------------------------------------------  555

seq1  AGGTGGACCTCAGAAAATCAAATAACCCCATTAAAAAATGGGGCTCAGAA  998
                                                        
seq2  --------------------------------------------------  555

seq1  CTGAACAAAGAATTC  1013
                     
seq2  ---------------  555

seq1: chr7_110645724_110646719
seq2: B6Ng01-164F10.g_67_1048

seq1  GAATTCCATAGCACCCTAAAGTGTTTAGAAAGTAGTTAATGATTTTTAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATAGCACCCTAAAGTGTTTAGAAAGTAGTTAATGATTTTTAAT  50

seq1  ATTTGTCTTAATTTCTCCTGTTCTACCTTTAAGAGATTCAAGGTGCTTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGTCTTAATTTCTCCTGTTCTACCTTTAAGAGATTCAAGGTGCTTTT  100

seq1  CAAAGATGATCATTCGAAGCTATAGAAAGAGCTGCAGCCAACAGGAAGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGATGATCATTCGAAGCTATAGAAAGAGCTGCAGCCAACAGGAAGCA  150

seq1  GTGTGGATTTATTTACTCTGGCCATATTTCTTTTGTCTTCCATCTTAAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGGATTTATTTACTCTGGCCATATTTCTTTTGTCTTCCATCTTAAAA  200

seq1  AAAAAAAAAGAAAAAGAAGAAGTTAAACTCTTTCTGAAATCAGCAACTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAAGAAAAAGAAGAAGTTAAACTCTTTCTGAAATCAGCAACTCT  250

seq1  ACCTGAATATTCTTTTCCTAAAAGTCTTCTCAGTTATAGTTCAGATCTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGAATATTCTTTTCCTAAAAGTCTTCTCAGTTATAGTTCAGATCTGT  300

seq1  GAAGGTGAGTATAGTAAGACTTCCAGATATTAGCACCATGTGTTATGATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGTGAGTATAGTAAGACTTCCAGATATTAGCACCATGTGTTATGATT  350

seq1  CATTTAAGGCAAGGAATTATTGCTGGTGGACTATCTATCTATCTATCTAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTAAGGCAAGGAATTATTGCTGGTGGACTATCTATCTATCTATCTAT  400

seq1  CTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCAATCATCTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCAATCATCTA  450

seq1  TTTTACATTTGACTGTCTTTCTTTGCTAAAATCAAGTATTTGAAAAATTC  500
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  TTTTACATTTGACTGTCTGTCTTTGCTAAAATCAAGTATTTGAAAAATTC  500

seq1  ATTAAGAAAGACACTCATCTGTTCTAAGATATCTGCAGCAGGAAAGTCCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAGAAAGACACTCATCTGTTCTAAGATATCTGCAGCAGGAAAGTCCT  550

seq1  TTGCTTTATTTTAAATAGTCAATTGTTTTTCTTCATGTTTGTAGTTCAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTTTATTTTAAATAGTCAATTGTTTTTCTTCATGTTTGTAGTTCAAA  600

seq1  TGTTTTAACACTGCTATTAATCTCTGAAGATGGATTTAGCCCTTTGGTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  TGTTTTAACACTGCTATTAATCTCTGAAGATGGATTTAGCCCTTTGGTTG  650

seq1  TCAAAATCCATATTATTTACTCACTCAAAAGGAAACAAGGACAAAGAACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAATCCATATTATTTACTCACTCAAAAGGAAACAAGGACAAAGAACA  700

seq1  TGTCTCCTCTTCCTCCTCCTCGGCAGTCCAGTGGCAGGGAGTATTCAGTG  750
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  TGTCTCCTCTTCCTCCTCCTCGGCAGTCCAGTGGCA-GGAGTATTCAGTG  749

seq1  AAGAATAACTTTACAACACATTAGCCAATACCCAGGGTGTCCCTT-GATG  799
      ||||||||||||||||| ||||||||||||||||||||||||||| ||||
seq2  AAGAATAACTTTACAACGCATTAGCCAATACCCAGGGTGTCCCTTGGATG  799

seq1  AACACAACAGGGACCATGGGTTTGGTGGCAGCCAATGACTAACAATGCCT  849
      |||||||||||||||||||||||||||||| ||||||||| || ||||||
seq2  AACACAACAGGGACCATGGGTTTGGTGGCAACCAATGACTGACGATGCCT  849

seq1  TTGAAAACAAGTTTCTTAAGTGCTAAAGAGACCCTGTTGTAATTATAAGT  899
      |||||||||  |||||| ||||||||||||| ||||||| |||||| |||
seq2  TTGAAAACAGCTTTCTT-AGTGCTAAAGAGATCCTGTTG-AATTAT-AGT  896

seq1  CATGTGGTTCTTCAACAATCTGAGTTTTTATTGCTGCTGGCGACCCCTTA  949
      ||||||| || |||   ||||||||||||| |||||||||| ||||  ||
seq2  CATGTGGCTC-TCA--CATCTGAGTTTTTA-TGCTGCTGGCTACCC--TA  940

seq1  AAGGGTAGTTAAAATATACCTGGTCTGCTTAAGAATACATACTTTAT  996
      || ||||| ||||  |||||||| |||| ||||||| ||||||||||
seq2  AA-GGTAGCTAAA--ATACCTGGCCTGC-TAAGAAT-CATACTTTAT  982