BAC Information

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BAC

Clone NameB6Ng01-164L10
Chromosome2 (Build37)
Map Location 33,897,329 - 34,031,499
singlet/doubletdoublet
Overlap genePbx3
Upstream geneGarnl3, Ralgps1, Angptl2, Zbtb34, Zbtb43, LOC676764, Lmx1b, LOC100041918, 2610528K11Rik, LOC100041931
Downstream geneLOC665948, Mapkap1, LOC623448, LOC623269, Gapvd1, Hspa5, Rabepk, Fbxw2, EG623370, Psmd5, D730039F16Rik, Phf19, Traf1, Hc, AI182371
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-164L10.bB6Ng01-164L10.g
ACCDH956963DH956964
length1,1821,046
definitionDH956963|Mus musculus domesticus DNA, BAC clone: B6Ng01-164L10, 5' end.DH956964|Mus musculus domesticus DNA, BAC clone: B6Ng01-164L10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(34,030,317 - 34,031,499)(33,897,329 - 33,898,380)
sequence
gaattctgtttcgtctcacttctaggtggataccctccgtcatgttatca
atcagacgggaggctacagtgacggccttggagcaaactcactgtacagt
ccacataacttaaacgtgagtaccctggggagcaagctgtgggaactgtg
tcagggaaacagtgactaatgaacaagttaatagtcgctggacttggctt
cacgtcttcttggcagttgggggcggcagcatctttgctatggtttcatt
ttatggcgagcagtgcttcctgctacctagctgtcctttgaaaccctcac
agaagcccaaaggggctggtgtcctatcatcagaggggatttaagtacca
gcccattaagactccatttcatagcagccgtgccgtgtgggaaacgggtc
atttatcttagaatcaagcagcaagaaaattccccagcacagagcaggtg
aaggtgataaccttggaggcccagcacattggcaaccatgctaaacaaag
aaccccattctagactgctggcctggggtgcaaaatggaacccctgagct
taatgacctctctgctttaatgatagagaaacctttgttactgattcaca
aactttcccttgcttcctccccttacatggatgggaaatgacagacacac
ggctctgcaaagtgtgaggaatgccctgttctgggacacatggcagcaga
ccagaggagaatggagaaaagtctccttttttaaggccttggttcgctgt
aagagagtaaatattaatgacttaaaaagtgattgaggatgttcaattgt
aaaggaaaaaaaaggaccattaaatactcaaatcttttacatttgaaatg
tcaaatctttctttttgggtttataaataactcataataacccacaacaa
gccatataaaaagccttttagtttgcatttctcctttttcattttagtgt
tttgaaatgctttcagagaattgtgcgatatccttatcaacatgattaaa
atatgaagcagtggatttgcctgcagcatttttacagacattgaattcca
ttctttcactgatgaggcttgttaaggcgctgttgtttaatacagtgcat
tatttcagccatcagagtagattaatttattttagggaaaaaaagagtgc
tctgtggcaacctccttgcactgcatgcaggg
gaattctcctttcaggctctgggcttcccgaggggcaggctgtcctttgc
tggcaagagtgctactcaagagtgaggctgccgcttcagactactcactg
cggactgcacctacaaccctcagtccacacctaggcaaccagaggtcaga
tatgtccctcctctaaatgcaaactagaatgatgaccagccaggtagttg
gtgtgattcccccaagtcatccatgctgtccatgggggtacacggtggga
ggagggtatgttctgcaaacatttcggaagactgaggcatactttgctcc
agtgacccaccacaaccctccgctttacctctcctggcttcctgcctcgc
atcacaaacccgctggtgttcccctggctactccttcccacttcctgggt
ttgcaacagacaatgggttcccagctgcgaaactttctccgagcctctaa
ttacaggggaccagaaggcaggtgagctgtcttctctgtggacctctgat
tggttgatccataaccaatggcatacacagatgactgatacctactctct
attccctgcagatcatcacgatgcctcaaagactgtaaaagaatgcattt
gcccattgactttcctgccttctctcttctagactcagatctttgaattt
gagcttcctgcctagaaatttctgtactgtggagctgtgtggacgtcatc
cccaccccctggaggaagtgggtcggagttagctttctcataaacggtgt
tcagatggaagaaagcagctgtcgtagaagccacgtcaatctgaatggta
aaaggtttgggcaaaacatattttattgttcttgctgtcagaagcataaa
gatttaagggcatgtgactcggtattgctgtggactttttttccttgaca
ataacataaacttaaaaccgtataaaatcatttgacaatttatgctcaag
agcttggagtggaataatgggcttttttttttttttgcatcgaaatgccc
tctcttccgtcatctaataaactgtcagaaataaattcactcaaag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_34030317_34031499
seq2: B6Ng01-164L10.b_46_1227 (reverse)

seq1  CCCTGCATGGCAGCTGCAGGAGAGGTTGTCAACGAGCACTCTTTTTTTTT  50
      |||||||| |||| |||| | ||||||| ||  |||||||||||||||  
seq2  CCCTGCAT-GCAG-TGCAAG-GAGGTTGCCACAGAGCACTCTTTTTTT--  45

seq1  TCCCCCTAAAATAAATTAATCCTTACTCTGGTGGCTTGAGATTATGCACT  100
         ||||||||||||||||||  ||||||| |||| ||| || |||||||
seq2  ---CCCTAAAATAAATTAATC--TACTCTGATGGC-TGAAATAATGCACT  89

seq1  GTATTATACAACAGCGTCTTATCAAGCCTCATCAGTGAA--GATGGAATT  148
      |||||| ||||||||| |||| |||||||||||||||||   ||||||||
seq2  GTATTAAACAACAGCGCCTTAACAAGCCTCATCAGTGAAAGAATGGAATT  139

seq1  C-ATGTCTGT-AAAATGCTGCAGGCAA--TCACTGCTTCATATTTT-ATC  193
      | |||||||| ||||||||||||||||   |||||||||||||||| |||
seq2  CAATGTCTGTAAAAATGCTGCAGGCAAATCCACTGCTTCATATTTTAATC  189

seq1  ATGTTGATAAGGATATCGCAC-ATTCTCTG-AAGCATTTCAAAACACTTA  241
      ||||||||||||||||||||| |||||||| ||||||||||||||||| |
seq2  ATGTTGATAAGGATATCGCACAATTCTCTGAAAGCATTTCAAAACACTAA  239

seq1  AATGAAAAAGGAGAAATGC-AACTAAAAGGCTTTTTATATGGCTTGTTGT  290
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  AATGAAAAAGGAGAAATGCAAACTAAAAGGCTTTTTATATGGCTTGTTGT  289

seq1  GGGTTATTATGAGTTATTTATAAACCCAAAAAGAAAGATTTGACATTTCA  340
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTATTATGAGTTATTTATAAACCCAAAAAGAAAGATTTGACATTTCA  339

seq1  AATGTAAAAGATTTGAGTATTTAATGGTCCTTTTTTTTCCTTTACAATTG  390
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTAAAAGATTTGAGTATTTAATGGTCCTTTTTTTTCCTTTACAATTG  389

seq1  AACATCCTCAATCACTTTTTAAGTCATTAATATTTACTCTCTTACAGCGA  440
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATCCTCAATCACTTTTTAAGTCATTAATATTTACTCTCTTACAGCGA  439

seq1  ACCAAGGCCTTAAAAAAGGAGACTTTTCTCCATTCTCCTCTGGTCTGCTG  490
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAGGCCTTAAAAAAGGAGACTTTTCTCCATTCTCCTCTGGTCTGCTG  489

seq1  CCATGTGTCCCAGAACAGGGCATTCCTCACACTTTGCAGAGCCGTGTGTC  540
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGTGTCCCAGAACAGGGCATTCCTCACACTTTGCAGAGCCGTGTGTC  539

seq1  TGTCATTTCCCATCCATGTAAGGGGAGGAAGCAAGGGAAAGTTTGTGAAT  590
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCATTTCCCATCCATGTAAGGGGAGGAAGCAAGGGAAAGTTTGTGAAT  589

seq1  CAGTAACAAAGGTTTCTCTATCATTAAAGCAGAGAGGTCATTAAGCTCAG  640
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTAACAAAGGTTTCTCTATCATTAAAGCAGAGAGGTCATTAAGCTCAG  639

seq1  GGGTTCCATTTTGCACCCCAGGCCAGCAGTCTAGAATGGGGTTCTTTGTT  690
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTCCATTTTGCACCCCAGGCCAGCAGTCTAGAATGGGGTTCTTTGTT  689

seq1  TAGCATGGTTGCCAATGTGCTGGGCCTCCAAGGTTATCACCTTCACCTGC  740
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCATGGTTGCCAATGTGCTGGGCCTCCAAGGTTATCACCTTCACCTGC  739

seq1  TCTGTGCTGGGGAATTTTCTTGCTGCTTGATTCTAAGATAAATGACCCGT  790
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTGCTGGGGAATTTTCTTGCTGCTTGATTCTAAGATAAATGACCCGT  789

seq1  TTCCCACACGGCACGGCTGCTATGAAATGGAGTCTTAATGGGCTGGTACT  840
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCACACGGCACGGCTGCTATGAAATGGAGTCTTAATGGGCTGGTACT  839

seq1  TAAATCCCCTCTGATGATAGGACACCAGCCCCTTTGGGCTTCTGTGAGGG  890
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATCCCCTCTGATGATAGGACACCAGCCCCTTTGGGCTTCTGTGAGGG  889

seq1  TTTCAAAGGACAGCTAGGTAGCAGGAAGCACTGCTCGCCATAAAATGAAA  940
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAAAGGACAGCTAGGTAGCAGGAAGCACTGCTCGCCATAAAATGAAA  939

seq1  CCATAGCAAAGATGCTGCCGCCCCCAACTGCCAAGAAGACGTGAAGCCAA  990
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATAGCAAAGATGCTGCCGCCCCCAACTGCCAAGAAGACGTGAAGCCAA  989

seq1  GTCCAGCGACTATTAACTTGTTCATTAGTCACTGTTTCCCTGACACAGTT  1040
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCAGCGACTATTAACTTGTTCATTAGTCACTGTTTCCCTGACACAGTT  1039

seq1  CCCACAGCTTGCTCCCCAGGGTACTCACGTTTAAGTTATGTGGACTGTAC  1090
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACAGCTTGCTCCCCAGGGTACTCACGTTTAAGTTATGTGGACTGTAC  1089

seq1  AGTGAGTTTGCTCCAAGGCCGTCACTGTAGCCTCCCGTCTGATTGATAAC  1140
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAGTTTGCTCCAAGGCCGTCACTGTAGCCTCCCGTCTGATTGATAAC  1139

seq1  ATGACGGAGGGTATCCACCTAGAAGTGAGACGAAACAGAATTC  1183
      |||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACGGAGGGTATCCACCTAGAAGTGAGACGAAACAGAATTC  1182

seq1: chr2_33897329_33898380
seq2: B6Ng01-164L10.g_67_1111

seq1  GAATTCTCCTTTCAGGCTCTGGGCTTCCCGAGGGGCAGGCTGTCCTTTGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCTTTCAGGCTCTGGGCTTCCCGAGGGGCAGGCTGTCCTTTGC  50

seq1  TGGCAAGAGTGCTACTCAAGAGTGAGGCTGCCGCTTCAGACTACTCACTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCAAGAGTGCTACTCAAGAGTGAGGCTGCCGCTTCAGACTACTCACTG  100

seq1  CGGACTGCACCTACAACCCTCAGTCCACACCTAGGCAACCAGAGGTCAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGACTGCACCTACAACCCTCAGTCCACACCTAGGCAACCAGAGGTCAGA  150

seq1  TATGTCCCTCCTCTAAATGCAAACTAGAATGATGACCAGCCAGGTAGTTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTCCCTCCTCTAAATGCAAACTAGAATGATGACCAGCCAGGTAGTTG  200

seq1  GTGTGATTCCCCCAAGTCATCCATGCTGTCCATGGGGGTACACGGTGGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGATTCCCCCAAGTCATCCATGCTGTCCATGGGGGTACACGGTGGGA  250

seq1  GGAGGGTATGTTCTGCAAACATTTCGGAAGACTGAGGCATACTTTGCTCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGGTATGTTCTGCAAACATTTCGGAAGACTGAGGCATACTTTGCTCC  300

seq1  AGTGACCCACCACAACCCTCCGCTTTACCTCTCCTGGCTTCCTGCCTCGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGACCCACCACAACCCTCCGCTTTACCTCTCCTGGCTTCCTGCCTCGC  350

seq1  ATCACAAACCCGCTGGTGTTCCCCTGGCTACTCCTTCCCACTTCCTGGGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACAAACCCGCTGGTGTTCCCCTGGCTACTCCTTCCCACTTCCTGGGT  400

seq1  TTGCAACAGACAATGGGTTCCCAGCTGCGAAACTTTCTCCGAGCCTCTAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCAACAGACAATGGGTTCCCAGCTGCGAAACTTTCTCCGAGCCTCTAA  450

seq1  TTACAGGGGACCAGAAGGCAGGTGAGCTGTCTTCTCTGTGGACCTCTGAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAGGGGACCAGAAGGCAGGTGAGCTGTCTTCTCTGTGGACCTCTGAT  500

seq1  TGGTTGATCCATAACCAATGGCATACACAGATGACTGATACCTACTCTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTGATCCATAACCAATGGCATACACAGATGACTGATACCTACTCTCT  550

seq1  ATTCCCTGCAGATCATCACGATGCCTCAAAGACTGTAAAAGAATGCATTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCCTGCAGATCATCACGATGCCTCAAAGACTGTAAAAGAATGCATTT  600

seq1  GCCCATTGACTTTCCTGCCTTCTCTCTTCTAGACTCAGATCTTTGAATTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCATTGACTTTCCTGCCTTCTCTCTTCTAGACTCAGATCTTTGAATTT  650

seq1  GAGCTTCCTGCCTAGAAATTTCTGTACTGTGGAGCTGTGTGGACGTCATC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTTCCTGCCTAGAAATTTCTGTACTGTGGAGCTGTGTGGACGTCATC  700

seq1  CCCACCCCCTGGAGGAAGTGGGTCGGAGTTAGCTTTCTCATAAACGGTGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACCCCCTGGAGGAAGTGGGTCGGAGTTAGCTTTCTCATAAACGGTGT  750

seq1  TCAGATGGAAGAAAAGCAGCTGTCGTAGAAGCCACGTCAATCTGAATGGT  800
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  TCAGATGGAAG-AAAGCAGCTGTCGTAGAAGCCACGTCAATCTGAATGGT  799

seq1  AAAAGGTTTGGGCAAAAACATATTTTATTGTTCTTGCTGTCAGAAGCATA  850
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  AAAAGGTTTGGGC-AAAACATATTTTATTGTTCTTGCTGTCAGAAGCATA  848

seq1  AAGATTTAAGGGGCATGTGACTCGGTAATTGCTGTGGACTTTTTTTCCTT  900
      ||||||||| |||||||||||||||| |||||||||||||||||||||||
seq2  AAGATTTAA-GGGCATGTGACTCGGT-ATTGCTGTGGACTTTTTTTCCTT  896

seq1  GACAATAAACATAAAACTTAAAACTGTATTAAAATCATTTGACAATTTTT  950
      |||||| ||||| ||||||||||| ||| ||||||||||||||||  |||
seq2  GACAAT-AACAT-AAACTTAAAACCGTA-TAAAATCATTTGACAA--TTT  941

seq1  ATGCTCAAAGAGCTTGGAGT-GAATAATGGG-GCTTTTTTTTTTTTGCAT  998
      |||||| ||||||||||||| ||||||||||   ||||||||||||||||
seq2  ATGCTC-AAGAGCTTGGAGTGGAATAATGGGCTTTTTTTTTTTTTTGCAT  990

seq1  CGAAAATGCACTCTCT--CGTCAACCTATAAAACTGTCAGAAATAAATTC  1046
      || |||||| ||||||  |||| | |||  ||||||||||||||||||||
seq2  CG-AAATGCCCTCTCTTCCGTC-ATCTAATAAACTGTCAGAAATAAATTC  1038

seq1  A-TCAAA  1052
      | |||||
seq2  ACTCAAA  1045