BAC Information

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BAC

Clone NameB6Ng01-164M04
Chromosome2 (Build37)
Map Location 172,555,466 - 172,690,121
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100043744, Cbln4, Mc3r, 2010011I20Rik, Aurka, Cstf1, F730031O20Rik, 2410001C21Rik, A330041C17Rik, 1700029J11Rik, LOC629957, Tcfap2c, LOC100043750
Downstream geneBmp7, LOC100043751, Spo11, Rae1, Rbm38, Ctcfl, EG619800, Pck1, Zbp1, Tmepai, 1700021F07Rik, 1700030G11Rik, LOC100043911, Rab22a, 1700010B08Rik, Vapb, LOC620189
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-164M04.bB6Ng01-164M04.g
ACCDH956999DH957000
length423149
definitionDH956999|Mus musculus domesticus DNA, BAC clone: B6Ng01-164M04, 5' end.DH957000|Mus musculus domesticus DNA, BAC clone: B6Ng01-164M04, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(172,555,466 - 172,555,894)(172,689,973 - 172,690,121)
sequence
cccataggagtgctgtctggcaccaagaccaaaactgagccttccttacg
caagcaatccccactcgatggacagctggatcattcccagctttcttctc
gatggagttattgctgtaaatggatcttctgcatgacgtcgttcaatatt
atcccgatggtcccttagaggtgatattcaatgatatttcaagggtgaga
ttcgagttctcacacattttactgttggactcagaatcaatgtaggacga
gagtctagtcatagacaatgcacacctagtcgtgtgtgctcttcttcccg
cagcacacattgagccagttatcttttgcaacccaggattcttctccttc
cagacagtaattggcaggaatcatgcatgtgtgctgtggtttggtgtgtg
tgtatgtgtgtatatgtgtgtgg
tgtgtttgttctagcagtttctgacacccttggaattccttggtaggcac
aagaacatctgttgtcgttcacagcaaaccttgtcaaccatacccgaggt
tatggggatttttgagggttttgttttgttttgttttgttggggggggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_172555466_172555894
seq2: B6Ng01-164M04.b_49_477

seq1  GAATTCCCCATAGGAGTGCTGTCTGGCACCAAGACCAAAACTGAGCCTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCCATAGGAGTGCTGTCTGGCACCAAGACCAAAACTGAGCCTTC  50

seq1  CTTACGCAAGCAATCCCCACTCGATGGACAGCTGGATCATTCCCAGCTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACGCAAGCAATCCCCACTCGATGGACAGCTGGATCATTCCCAGCTTT  100

seq1  CTTCTCGATGGAGTTATTGCTGTAAATGGATCTTCTGCATGACGTCGTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTCGATGGAGTTATTGCTGTAAATGGATCTTCTGCATGACGTCGTTC  150

seq1  AATATTATCCCGATGGTCCCTTAGAGGTGATATTCAATGATATTTCAAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTATCCCGATGGTCCCTTAGAGGTGATATTCAATGATATTTCAAGG  200

seq1  GTGAGATTCGAGTTCTCACACATTTTACTGTTGGACTCAGAATCAATGTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGATTCGAGTTCTCACACATTTTACTGTTGGACTCAGAATCAATGTA  250

seq1  GGACGAGAGTCTAGTCATAGACAATGCACACCTAGTCGTGTGTGCTCTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACGAGAGTCTAGTCATAGACAATGCACACCTAGTCGTGTGTGCTCTTC  300

seq1  TTCCCGCAGCACACATTGAGCCAGTTATCTTTTGCAACCCAGGATTCTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCGCAGCACACATTGAGCCAGTTATCTTTTGCAACCCAGGATTCTTC  350

seq1  TCCTTCCAGACAGTAATTGGCAGGAATCATGCATGTGTGCTGTGGTTTGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTCCAGACAGTAATTGGCAGGAATCATGCATGTGTGCTGTGGTTTGG  400

seq1  TGTGTGTGTATGTGTGTATATGTGTGTGG  429
      |||||||||||||||||||||||||||||
seq2  TGTGTGTGTATGTGTGTATATGTGTGTGG  429

seq1: chr2_172689973_172690121
seq2: B6Ng01-164M04.g_76_224 (reverse)

seq1  ACCCCCCCCAACAAAACAAAACAAAACAAAACCCTCAAAAATCCCCATAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCCCCCAACAAAACAAAACAAAACAAAACCCTCAAAAATCCCCATAA  50

seq1  CCTCGGGTATGGTTGACAAGGTTTGCTGTGAACGACAACAGATGTTCTTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCGGGTATGGTTGACAAGGTTTGCTGTGAACGACAACAGATGTTCTTG  100

seq1  TGCCTACCAAGGAATTCCAAGGGTGTCAGAAACTGCTAGAACAAACACA  149
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTACCAAGGAATTCCAAGGGTGTCAGAAACTGCTAGAACAAACACA  149