BAC Information

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BAC

Clone NameB6Ng01-164P05
Chromosome2 (Build37)
Map Location 121,936,930 - 122,092,209
singlet/doubletdoublet
Overlap gene4930424G05Rik, B2m, Trim69, 4933406J08Rik, LOC433468, LOC670832, Sord
Upstream geneLOC640543, Lcmt2, Adal, Zscan29, D2Ertd435e, Trp53bp1, Mtap1a, Hisppd2a, Ckmt1, Strc, Catsper2, Pdia3, Ell3, Serf2, LOC574418, 2310003F16Rik, Mfap1b, Wdr76p, Mfap1a, Wdr76, Frmd5, Casc4, Mageb3, Ctdspl2, Eif3s1
Downstream geneDuox2, Duoxa2, Duoxa1, Duox1, Shf, Slc28a2, Bambi-ps1, Rp23-357i14.1, Gatm, Spata5l1, AA467197, Slc30a4, Pldn, Sqrdl
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-164P05.bB6Ng01-164P05.g
ACCDH957139DH957140
length1,0781,108
definitionDH957139|Mus musculus domesticus DNA, BAC clone: B6Ng01-164P05, 5' end.DH957140|Mus musculus domesticus DNA, BAC clone: B6Ng01-164P05, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(122,091,127 - 122,092,209)(121,936,930 - 121,938,066)
sequence
gaattcccatcttcctgcagctccctctaagggcacctggataaagtcag
gcaactccgggataattaactatgctggtggcacactgaacagcctaccc
cagccattttggtcctgggatgtggaggaggccaaggtgtggaagctaaa
ggagacgtgaacatacaagaatctgtggagttatttggggctttgttgct
aaagcattctcactcctactatgtacactaggccggcctcaagtatggtt
cccccacctcagctctttaagtgctggaactacaggcaaatactaccacg
ccatctcttaactatgcctggccagcccacccactcttcatgacttcaga
ggcctcaaaaagctcaactcagtcagaaaatggagatgccaagaccagtt
tagaagatccaccccagcacaaccttaggcaaagtgacatatctttgttc
atggttctcctttccccccccccccccccggctcctttcttgagaacaca
accaggaaacacatgcttatttggaagtttaacagagaagtcttctcctg
cctgaggcatctctgagaagtcttccaaggcgaggggctttctcattcct
gctaggggagcgcttctcacccttccttatgccacgatcctttagtacag
ttccccatgacgtggtgagccccaataataagttttgttgctacctcata
gctgtcatttttctgttgtaataatgtaaatatctggtatgcagggtata
caatggggttaacctcaaagaggtaatgacccaaaggttgagaaccactg
tactagaggaactttgagcatctccatgctggaaacagtcttgagagaaa
gccaatgctaagtctggtgttacttgaattagggctggagaagaggagca
agtaagcagggatgtgtacaaaacctctgagccttgcctctttgcaggaa
gaaaagcaccgtgcttggctgattactccctccaccttgtagatgctctt
gcattgttgtttctagcaattgttagattacgtttagtatggaaaatatg
tccctgcctaaagcctttgttattcttc
gaattccattctcttctactcttaaatgggacaagaagtaggggtgaagc
cgggcgtggtggcgcacgcctttaatcccagcacttgggaggcagaggca
ggcggatttctgagtttgaggccagcctggtctacaaagtgagttccagg
acagccagggctacacagagaaaccctgtctcgaaaaaacaacaacaaca
aaaaaaccaaccaaccaaacaaaaagaagtaggggtgatatataaaaagc
gagcctcttaacactgcataatcctgattatttatgacataacctttaca
taataccacctatgtggaaaccaaacctttaatatacaagccaaaatata
aaggcagccacaatcatttatacacactcttgcatggtaacagtcttact
gtaggagccataatgagatctaactgcatagcaaagaggcttttaaaaaa
agctaaggagtatattttaaaccttttatgggtctatttacctcaaatga
gaaatttgagccatctacctacctgaaatacaaatgtaggttaagagcaa
ctgcagtactggctgagctgaccagcaccagaacatccaagtcctgagac
actctcagcgatgtaaaggaagagacactggcgggctccagctgctcaga
atcttctctgagaagagccaggtccacttgcgctacctgcgtgccatcca
tagtgttaaaaatatctgagttagagttaaagaagtgtcagtttataaat
acgcaggaccctttaaatcataaggttgtctgaatggttaccacctcgca
ggtacagcatgagggctggaaagagggcattctccaacacagtaaccaga
tgactgagaagccagcggcttacaagccgatgcacagttcttcctagctg
ctgcttaccatcctgttacagaaaggtaaacccaatctagcattacacgt
tagcatacccaaatgttgtctcacatgcacacattaaaagctcagatatt
tgttttcttgtagtcacaaatctacttacacttagattaaatacactata
tttggataataagttctcttccccattctttttccctttttctttttata
ttgttcct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_122091127_122092209
seq2: B6Ng01-164P05.b_47_1124 (reverse)

seq1  GAAGAATAACAAA-GCTTTAAGCAGGGGACATATTTTCCATACTAAACGT  49
      ||||||||||||| |||||| ||| |||||||||||||||||||||||||
seq2  GAAGAATAACAAAGGCTTTAGGCA-GGGACATATTTTCCATACTAAACGT  49

seq1  AATCTTACAAACTGCTAGAAACAAACATGGCAGAGCATCTTACAGGTGGA  99
      ||||| || || ||||||||||||  |||  |||||||||   |||||||
seq2  AATCTAAC-AATTGCTAGAAACAACAATGCAAGAGCATCTACAAGGTGGA  98

seq1  GGGAGTAATTCAGGCAAAGCACGGTGCTTTTCTTCCCTGC-AAGAGGC-A  147
      |||||||| ||| || |||||||||||||||||| ||||| ||||||| |
seq2  GGGAGTAA-TCA-GCCAAGCACGGTGCTTTTCTT-CCTGCAAAGAGGCAA  145

seq1  GGCTCAGGAGGTTTTGGTACACATCCCTGCCTACTTGCTCCTCCTCCTCA  197
      |||||| |||||||| |||||||||||||| |||||||||||| ||  ||
seq2  GGCTCA-GAGGTTTT-GTACACATCCCTGCTTACTTGCTCCTCTTCTCCA  193

seq1  GCCCTAACTC-AGTTACACCAGACTTAGCACTGGCTTTCTCTCAAGACTG  246
      ||||||| || ||| ||||||||||||||| |||||||||||||||||||
seq2  GCCCTAATTCAAGTAACACCAGACTTAGCATTGGCTTTCTCTCAAGACTG  243

seq1  TTTCCAGCATGGAGATGCTCAAAGTTCCTCTAGTACAGTGGTTCTCAACC  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCAGCATGGAGATGCTCAAAGTTCCTCTAGTACAGTGGTTCTCAACC  293

seq1  TTTGGGTCATAACCTCTTTGAGGTTAACCCCATTGTATACCCTGCATACC  346
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  TTTGGGTCATTACCTCTTTGAGGTTAACCCCATTGTATACCCTGCATACC  343

seq1  AGATATTTACATTATTACAACAGAAAAATGACAGCTATGAGGTAGCAACA  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATATTTACATTATTACAACAGAAAAATGACAGCTATGAGGTAGCAACA  393

seq1  AAACTTATTATTGGGGCTCACCACGTCATGGGGAACTGTACTAAAGGATC  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTTATTATTGGGGCTCACCACGTCATGGGGAACTGTACTAAAGGATC  443

seq1  GTGGCATAAGGAAGGGTGAGAAGCGCTCCCCTAGCAGGAATGAGAAAGCC  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCATAAGGAAGGGTGAGAAGCGCTCCCCTAGCAGGAATGAGAAAGCC  493

seq1  CCTCGCCTTGGAAGACTTCTCAGAGATGCCTCAGGCAGGAGAAGACTTCT  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCGCCTTGGAAGACTTCTCAGAGATGCCTCAGGCAGGAGAAGACTTCT  543

seq1  CTGTTAAACTTCCAAATAAGCATGTGTTTCCTGGTTGTGTTCTCAAGAAA  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTAAACTTCCAAATAAGCATGTGTTTCCTGGTTGTGTTCTCAAGAAA  593

seq1  GGAGCCGGGGGGGGGGGGGGGGGGAAAGGAGAACCATGAACAAAGATATG  646
      ||||||  ||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCC--GGGGGGGGGGGGGGGGAAAGGAGAACCATGAACAAAGATATG  641

seq1  TCACTTTGCCTAAGGTTGTGCTGGGGTGGATCTTCTAAACTGGTCTTGGC  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTTTGCCTAAGGTTGTGCTGGGGTGGATCTTCTAAACTGGTCTTGGC  691

seq1  ATCTCCATTTTCTGACTGAGTTGAGCTTTTTGAGGCCTCTGAAGTCATGA  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCCATTTTCTGACTGAGTTGAGCTTTTTGAGGCCTCTGAAGTCATGA  741

seq1  AGAGTGGGTGGGCTGGCCAGGCATAGTTAAGAGATGGCGTGGTAGTATTT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTGGGTGGGCTGGCCAGGCATAGTTAAGAGATGGCGTGGTAGTATTT  791

seq1  GCCTGTAGTTCCAGCACTTAAAGAGCTGAGGTGGGGGAACCATACTTGAG  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGTAGTTCCAGCACTTAAAGAGCTGAGGTGGGGGAACCATACTTGAG  841

seq1  GCCGGCCTAGTGTACATAGTAGGAGTGAGAATGCTTTAGCAACAAAGCCC  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCGGCCTAGTGTACATAGTAGGAGTGAGAATGCTTTAGCAACAAAGCCC  891

seq1  CAAATAACTCCACAGATTCTTGTATGTTCACGTCTCCTTTAGCTTCCACA  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATAACTCCACAGATTCTTGTATGTTCACGTCTCCTTTAGCTTCCACA  941

seq1  CCTTGGCCTCCTCCACATCCCAGGACCAAAATGGCTGGGGTAGGCTGTTC  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGGCCTCCTCCACATCCCAGGACCAAAATGGCTGGGGTAGGCTGTTC  991

seq1  AGTGTGCCACCAGCATAGTTAATTATCCCGGAGTTGCCTGACTTTATCCA  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTGCCACCAGCATAGTTAATTATCCCGGAGTTGCCTGACTTTATCCA  1041

seq1  GGTGCCCTTAGAGGGAGCTGCAGGAAGATGGGAATTC  1083
      |||||||||||||||||||||||||||||||||||||
seq2  GGTGCCCTTAGAGGGAGCTGCAGGAAGATGGGAATTC  1078

seq1: chr2_121936930_121938066
seq2: B6Ng01-164P05.g_67_1174

seq1  GAATTCCATTCTCTTCTACTCTTAAATGGGACAAGAAGTAGGGGTGAAGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATTCTCTTCTACTCTTAAATGGGACAAGAAGTAGGGGTGAAGC  50

seq1  CGGGCGTGGTGGCGCACGCCTTTAATCCCAGCACTTGGGAGGCAGAGGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGGCGTGGTGGCGCACGCCTTTAATCCCAGCACTTGGGAGGCAGAGGCA  100

seq1  GGCGGATTTCTGAGTTTGAGGCCAGCCTGGTCTACAAAGTGAGTTCCAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCGGATTTCTGAGTTTGAGGCCAGCCTGGTCTACAAAGTGAGTTCCAGG  150

seq1  ACAGCCAGGGCTACACAGAGAAACCCTGTCTCGAAAAAACAACAACAACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCCAGGGCTACACAGAGAAACCCTGTCTCGAAAAAACAACAACAACA  200

seq1  AAAAAACCAACCAACCAAACAAAAAGAAGTAGGGGTGATATATAAAAAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAACCAACCAACCAAACAAAAAGAAGTAGGGGTGATATATAAAAAGC  250

seq1  GAGCCTCTTAACACTGCATAATCCTGATTATTTATGACATAACCTTTACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCTCTTAACACTGCATAATCCTGATTATTTATGACATAACCTTTACA  300

seq1  TAATACCACCTATGTGGAAACCAAACCTTTAATATACAAGCCAAAATATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATACCACCTATGTGGAAACCAAACCTTTAATATACAAGCCAAAATATA  350

seq1  AAGGCAGCCACAATCATTTATACACACTCTTGCATGGTAACAGTCTTACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCAGCCACAATCATTTATACACACTCTTGCATGGTAACAGTCTTACT  400

seq1  GTAGGAGCCATAATGAGATCTAACTGCATAGCAAAGAGGCTTTTAAAAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGGAGCCATAATGAGATCTAACTGCATAGCAAAGAGGCTTTTAAAAAA  450

seq1  AGCTAAGGAGTATATTTTAAACCTTTTATGGGTCTATTTACCTCAAATGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTAAGGAGTATATTTTAAACCTTTTATGGGTCTATTTACCTCAAATGA  500

seq1  GAAATTTGAGCCATCTACCTACCTGAAATACAAATGTAGGTTAAGAGCAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATTTGAGCCATCTACCTACCTGAAATACAAATGTAGGTTAAGAGCAA  550

seq1  CTGCAGTACTGGCTGAGCTGACCAGCACCAGAACATCCAAGTCCTGAGAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCAGTACTGGCTGAGCTGACCAGCACCAGAACATCCAAGTCCTGAGAC  600

seq1  ACTCTCAGCGATGTAAAGGAAGAGACACTGGCGGGCTCCAGCTGCTCAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTCAGCGATGTAAAGGAAGAGACACTGGCGGGCTCCAGCTGCTCAGA  650

seq1  ATCTTCTCTGAGAAGAGCCAGGTCCACTTGCGCTACCTGCGTGCCATCCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTCTCTGAGAAGAGCCAGGTCCACTTGCGCTACCTGCGTGCCATCCA  700

seq1  TAGTGTTAAAAATATCTGAGTTAGAGTTAAAGAAGTGTCAGTTTATAAAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGTTAAAAATATCTGAGTTAGAGTTAAAGAAGTGTCAGTTTATAAAT  750

seq1  ACGCAGGACCCTTTAAATCATAAGGTTGTCTGAATGGTTACCACCTCGCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGCAGGACCCTTTAAATCATAAGGTTGTCTGAATGGTTACCACCTCGCA  800

seq1  GGTACAGCAGGAGGGCTGGAAAGAGGGCATTCTCCAACACAGTAACCAGA  850
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  GGTACAGCATGAGGGCTGGAAAGAGGGCATTCTCCAACACAGTAACCAGA  850

seq1  TGACTGAGAAGCCAGCGGCTTAACAAGCCGATGCACAGTTCTTCCTAGCT  900
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  TGACTGAGAAGCCAGCGGCTT-ACAAGCCGATGCACAGTTCTTCCTAGCT  899

seq1  GCTGCTTACCATCCTGTTACAGAAGGGTAAACCCAATCTAGCATTACACG  950
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  GCTGCTTACCATCCTGTTACAGAAAGGTAAACCCAATCTAGCATTACACG  949

seq1  TTAGCCATACCCAAATGTTGTCTCAACATGCAACCAACATTAAAAGCTCA  1000
      |||| ||||||||||||||||||| |||||||    ||||||||||||||
seq2  TTAG-CATACCCAAATGTTGTCTC-ACATGCA---CACATTAAAAGCTCA  994

seq1  GATATTTTGTTTTCTTGTAAGTCACCAAAATCTTACCTACACTTAGAATA  1050
      |||| ||||||||||||| ||||||  ||||| ||| |||||||||| ||
seq2  GATA-TTTGTTTTCTTGT-AGTCAC--AAATC-TACTTACACTTAGATTA  1039

seq1  AATACAACTATATTTGGATAATAAATTTTCTTTCTTTCCTCCCTTTCTTT  1100
      ||||| |||||||||||||||||| || ||||        ||| ||||||
seq2  AATAC-ACTATATTTGGATAATAAGTTCTCTT-------CCCCATTCTTT  1081

seq1  TTTTCCTCTTTTTTCCCTTTTTTTTTTTTTTGTTCCT  1137
      ||   | |||       ||| ||||| | ||||||||
seq2  TT---CCCTT-------TTTCTTTTTATATTGTTCCT  1108