MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-166J09
Chromosome	2 (Build37)
Map Location	54,143,729 - 54,144,887
singlet/doublet	singlet
Overlap gene	none
Upstream gene	LOC666872, LOC666876, LOC207933, Rprm, LOC666913, LOC626563
Downstream gene	LOC100041792, LOC100042878, Galnt13, LOC666936
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC666872 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666872
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 17 Proteins pseudo : _no_value

name	LOC666876 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666876
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 62 ESTs, 3 Proteins pseudo : _no_value

name	LOC207933 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:207933
definition	note : isopentenyl-diphosphate delta-isomerase-like pseudo : _no_value

name	Rprm (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67874 MGI:1915124
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC666913 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666913
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	LOC626563 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:626563
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	LOC100041792 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041792
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 Proteins pseudo : _no_value

name	LOC100042878 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042878
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 8 ESTs

name	Galnt13 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:271786 MGI:2139447
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC666936 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666936
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	Rprm (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142367811 GeneID:67874 MGI:1915124
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : reprimo, TP53 dependent G2 arrest mediator candidate transcript_id : NM_023396.4

name	LOC100042878 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149249319 GeneID:100042878
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs product : similar to sterile alpha motif domain containing 1, transcript variant 2 transcript_id : XM_001479862.1

name	LOC100042878 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149249317 GeneID:100042878
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 7 ESTs product : similar to sterile alpha motif domain containing 1, transcript variant 1 transcript_id : XM_001479860.1

name	Galnt13 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:76677927 GeneID:271786 MGI:2139447
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 13 transcript_id : NM_173030.2

name	Rprm (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:12963661 CCDS:CCDS16040.1 GeneID:67874 MGI:1915124
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0007050 - cell cycle arrest [Evidence IDA]; GO:0007346 - regulation of progression through mitotic cell cycle [Evidence IDA] codon_start : 1 note : reprimo, TP53 dependant G2 arrest mediator candidate product : reprimo, TP53 dependent G2 arrest mediator candidate protein_id : NP_075885.1

name	LOC100042878 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149249318 GeneID:100042878
definition	codon_start : 1 product : hypothetical protein isoform 1 protein_id : XP_001479910.1

name	LOC100042878 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149249320 GeneID:100042878
definition	codon_start : 1 product : hypothetical protein isoform 2 protein_id : XP_001479912.1

name	Galnt13 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:76677928 CCDS:CCDS16041.1 GeneID:271786 MGI:2139447
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0030145 - manganese ion binding [Evidence IEA]; GO:0004653 - polypeptide N-acetylgalactosaminyltransferase activity [Evidence IDA]; GO:0005529 - sugar binding [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]; GO:0016757 - transferase activity, transferring glycosyl groups [Evidence IEA] GO_process : GO:0006493 - protein amino acid O-linked glycosylation [Evidence IDA] codon_start : 1 note : pp-GalNAc-T13; UDP-N-acetyl-alpha-D-galactosamine: polypeptide N-acetylgalactosaminyltransferase 13 product : UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 13 protein_id : NP_766618.2

name	LOC666872 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666872
definition	number : 2 pseudo : _no_value

name	LOC666872 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666872
definition	number : 1 pseudo : _no_value

name	LOC666913 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666913
definition	number : 1 pseudo : _no_value

name	LOC626563 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:626563
definition	number : 1 pseudo : _no_value

name	LOC100041792 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041792
definition	number : 1 pseudo : _no_value

name	LOC666936 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666936
definition	number : 1 pseudo : _no_value

name	LOC666936 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666936
definition	number : 2 pseudo : _no_value

name	LOC666876 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149249316 GeneID:666876
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 62 ESTs, 3 Proteins product : similar to family with sequence similarity 96, member A pseudo : _no_value transcript_id : XR_034411.1

clone name	MSMg01-451K21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-062A11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-486A14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-434N10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-394L19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-524E22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-075K03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-080D09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-143M05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-081A13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-384C11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-514L16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-114C08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-452D23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-086F03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-114N21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-092F20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-063L17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-064I16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-311I05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-102P11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-368J22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-154P11
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-545H05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-084A06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-185I08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-445P18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-124A03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-072H20
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-401M23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-400J24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-137B07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-262E03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-166H19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-073A23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-157D18
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-334D10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-168I13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-431M12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-146P22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-050P01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-463L10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-134I01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-103P18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-437B12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-190A03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-051K16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-150B08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-478B14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-468G18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-184F17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-497A01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-086B14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-290I18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-418C12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-390L21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-416N03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-054L11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-476K12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-266F18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-445M06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-352H10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-340I01
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-060L17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-192P06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-355A20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-445F06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-074F13
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-388C11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-378M18
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-260N03
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-506J15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-446P05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-528C06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-454B12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-340I01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-300M07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-338N10
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-341H04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-200B15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-313I01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-294M03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-004I17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-137K14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-137A21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-285A13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-060I20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-251M14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-106G02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-146H06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-125M12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-002P09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-055L24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-304A10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-319B05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-056F01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-223L21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-046E13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-335D05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-163B24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-230H11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-331J15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-146D05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-004D03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-146J24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-090N08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-251A23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-119H24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-184G15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-315G11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-234E10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-009N22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-093F21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-202J02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-336A13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-280G10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-035H12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-094C10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-018M17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-194E15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-211D10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-297H06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-295H03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-126F13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-258O06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-095L13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-194L21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-162E23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-005H12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-078D23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-292H16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-306M12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-060F03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-268K04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-318M10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-047A17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-166J09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-067O10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-153I04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-042K01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-166G19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-286M09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-130F22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-134O18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-006I12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-290F03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-244I21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-178H16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-269B21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-280K17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-108G17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-305F18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-068H10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-071K14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-302A16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-062F18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-044C03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-151L01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-038J22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-115F18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-268I08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-224E19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-159L14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-039P13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-180O09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-141K21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-043L03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-293J14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-309O18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-295E16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-067H13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-099D06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-109O01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-156H07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-101K22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-190F02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-246H11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-269I03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-050A18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-276F12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-161G24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-101O12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-038C06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-118J06
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-166J09.b	B6Ng01-166J09.g
ACC	DH958324	DH958325
length	1,157	1,147
definition	DH958324\|Mus musculus domesticus DNA, BAC clone: B6Ng01-166J09, 5' end.	DH958325\|Mus musculus domesticus DNA, BAC clone: B6Ng01-166J09, 3' end.
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	gaattctcacccgaggaataccgaatggcagagaagcacctgaaaaaatg ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat tccacctcataccagtcagaatggctaagatcaaaaattcaggtgatagc agatgctggcaaggatgtggagaaagaggaacactcctccattgttggtg ggatttcaagcttgtacaaccactctggaaatcagtatggtggttcctca gaaaattggacacagtactactggaagatccaggaatacctctcctgggc atatacccagaaaatgttccaacttgtaataaagacacatgctccactat gttcatagcagccttatttataatagccagaagctggaaagaacccagat gcccctcaacagaggaatggatacagaaaatgtggtacatttacataatg gagtactactaagctattaaaaagagtgaatttatgaaattcctaggcaa atggatggacctggagggcatcatcctgagtgaggtaacccaatcacaaa ggaactctcacaatatgtactcactgataagtggatattagctcagaaac ttaggatacccaagataaaagatacaatttgctaaacatattaaactcaa gagaacgaagaccaaagtgtggacactttgccccttcttagaataggaaa caaaacacccatggaaggagttacagagtcaaaatttggaagtgtgaaga atgcatggaccatctagtgattgccatatccagagatccatcccatgatc agcctccaaagctgacatcattgcatacactagcaagattttgctgaaag gactcagatatagctgtctcttgtgagactatgccagggcctagcaaaca cagaagtggatgctcacagtcagctcttgaattgatcacagggccccaat agaggagctagagaaagcaaccaggactaaagggaactgcaaccctatag gtggacacatatgactaccagtacctggagctcttgtctctagctgcatt tgtatcaagatggcctataggccatcactgaagaagccatggacttgcag ctttatatgcccagtacaggggacgccaggcaaagggggagtgatgagta agggaat	gaattctgtagaggaaaatgaatacttttcctggtacaatgatgacatta atcagaaattaatgatttgaaagaatcattgagcccagaataaatgagca ctgtaatggtgtttcacaccacttcttaccattccctacagatgactgtt taatgattctccctggcaccctagttaaatattttaatatgtgatatgat gtgattctcaagcaggaaaaaaaattaggttaattgccctttttgtagca tttaactggaatgaaatactgtttttcctcatgaagcaatgaagagttca cgcataatggttgtgagaagagccatagcacagacacaatgacccgagaa actactgtggaaatgggctgggaacactgttgaacatgatgaaaacatcg acgtaactcatacttgcaattgtcataacaacttttattctgttgcttcc actaatattacctactctcatgcatttttcatgtcaaagttcaactgctc aaaggatctctgtaaaatgtcatctcatcctttaaatacagcactgaatg ttctccttgcctaggataggtacatattctcatgtgtacatgaagaaagg aagtaatgaagaaacattactttagattttcttaagagttgttgacttta ctgaccctcctgttaggtgatttctaatgcaaactttcaggtcctgaagg acagcggtggaaattgtttctcatcacacgtcacacatttatagcctttt taattttttttcctttttgctctttctccaccagtactttgaaatgaaaa cacagaggttctggaaggtatcaagacattcactactgaggataaaggtt gttccagaaaatgcagtttttctcaaaagattaaatgtggtgaaaactgt aagtcatttaaatgatcaaattcaaaccctgaacaaacagattgtgtcca gagagcatgggcctctagagaacactggtaatgtgtgaggaattcaaagg aaaagaaatctcactgtgttcagtgtcatctcatcatttatttcttccat aaatgtggaacttgggaatatagcaaccttttgtattacaaacccactcc caatgccctcaacactcaagaaagttgggagatgctttcttggactt
quality values	Open. Hide. 61 47 25 32 61 61 61 43 35 61 61 61 61 61 61 61 49 41 36 61 61 61 61 61 61 49 43 31 28 11 12 26 13 26 31 16 41 59 59 61 61 61 59 59 55 55 55 59 59 59 59 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 59 44 55 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 59 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 59 55 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 44 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 55 55 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 55 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 53 61 53 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 53 61 61 61 61 61 61 61 61 61 47 61 61 61 61 61 61 53 61 61 61 61 61 61 53 61 57 57 47 42 42 53 57 47 47 47 50 53 57 53 45 57 50 57 57 53 57 57 53 53 57 53 57 53 53 53 45 57 53 53 52 57 53 57 57 57 53 50 57 57 57 53 50 53 57 53 53 57 53 47 43 39 47 53 53 52 53 57 53 53 38 57 57 53 47 53 57 52 27 57 41 28 53 47 33 35 32 53 50 37 29 50 57 57 57 50 41 20 46 47 45 53 52 57 57 43 47 53 46 47 47 52 45 57 50 52 52 53 57 46 53 57 53 33 46 53 57 37 52 46 31 42 57 46 36 52 21 38 23 25 25 38 52 52 42 57 52 52 34 39 53 53 57 53 47 31 53 38 38 47 47 39 50 53 38 38 52 47 38 42 33 50 40 57 39 36 15 35 52 47 47 44 52 46 53 36 50 53 57 42 42 21 57 37 35 39 39 36 52 29 36 57 33 37 42 28 57 57 28 30 57 53 53 37 37 42 27 41 40 29 37 36 53 35 41 24 18 37 17 28 35 37 53 29 17 37 34 48 40 36 36 37 41 48 29 21 44 30 17 37 27 36 38 37 33 47 34 33 48 22 29 36 25 36 24 48 32 48 32 27 34 43 34 35 32 30 30 24 39 47 32 44 24 47 44 29 29 32 36 31 16 22 44 38 25 15 45 29 28 24 36 28 29 28 29 29 33 22 30 22 31 38 33 16 51 46 29 28 27 30 27 29 51 39 32 29 29 23 29 28 27 14 36 25 30 35 30 28 29 30 36 27 29 30 29 35 29 36 25 32 29 18 29 14 29 28 29 29 29 29 30 29 51 31 15 26 28 28 23 29 33 43 30 21 22 29 20 28 32 34 28 29 26 19 20 19 28 23 31 34 21 23 28 31 34 36 28 23 28 31 21 15 36 29 23 23 17 33 24 24 33 23 20 26 14 25 38 13 19 38 38 24 16 5 8 25 20 36 28 9 30 14 27 31 15 21 28 15 20 51 29 25 25 20 23 12 14 13 6 5 31 8 16 13 44 10 13 44 16 17 19 28 31 34 23 17 20 25 35 19 34 23 23 12 25 22 17 23 19 24 14 31 16 22 17 23 24 16 29 10 14 27 14 11 20 26 29 29 30 31 13 26 18 26 15 12 8 8 13 26 20 6 6 10 12 13 21 20 26 29 24 20 9 10 7 6 10 7 9 24 5 13 2 2 14 14 20 21 9 16 7 8 2 4 7 7 8 9 8 9 9 7 4 4 3 4 5 11 26 18 26 4 11 10 21 6 11 8 8 19 23 10 14 16 10 12 18 24 12 4 10 7 21 12 16 19 18 7 10 12 12 10 5 12 22 22 13 14 4 6 6 15 6 18 17 7 5 24 18 4 22 29 25 6 13 4 5 5 5 4 6 4 5 1 3 3 4 7 10 10 7 10	Open. Hide. 61 49 52 47 61 36 28 38 25 20 13 37 28 28 49 39 55 55 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 59 61 61 61 61 61 61 61 61 61 61 59 59 61 61 59 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 59 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 59 61 59 55 61 61 59 55 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 50 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 53 61 61 61 61 61 61 61 61 61 61 61 53 53 61 61 61 61 61 61 52 61 61 61 61 47 39 61 61 61 61 61 61 61 61 61 61 52 61 61 61 53 57 57 57 57 50 53 53 53 47 53 53 53 57 57 53 53 57 45 53 57 53 57 57 57 57 57 50 57 40 57 53 53 52 53 53 53 57 47 57 50 53 38 57 47 40 53 52 46 52 50 53 45 53 53 53 57 53 53 53 52 57 57 53 57 52 50 53 50 57 57 57 57 52 57 47 43 52 57 46 47 47 52 53 53 52 57 53 47 27 57 53 53 53 38 52 57 52 53 57 57 57 50 45 40 33 57 57 53 50 42 52 33 53 40 57 31 33 57 38 24 57 53 47 38 53 57 53 36 53 52 57 43 50 41 46 47 37 52 43 43 21 50 37 20 43 30 52 40 30 57 53 50 37 53 52 40 52 30 37 38 37 37 52 52 57 42 38 19 57 23 38 52 39 31 31 28 11 52 34 27 40 40 37 40 53 29 53 52 44 57 31 36 52 46 23 57 52 44 40 40 37 40 33 30 52 36 52 37 44 37 36 47 37 41 33 47 57 57 41 40 41 37 36 57 31 57 57 57 33 32 40 28 57 57 57 57 57 57 40 29 47 43 51 46 51 44 29 28 33 44 30 46 28 33 30 31 48 29 35 44 36 28 28 35 33 36 51 30 25 34 51 47 29 44 41 48 47 29 29 21 39 23 29 30 13 41 29 29 37 33 44 29 31 41 28 36 14 25 29 30 28 36 31 29 22 15 14 22 28 28 29 28 29 29 35 43 28 25 12 30 16 29 51 17 15 15 9 26 30 14 36 28 29 22 22 43 51 39 25 23 35 29 29 29 39 51 51 51 33 34 34 30 19 51 51 31 24 27 15 31 29 51 21 25 34 19 23 32 24 33 27 51 51 29 25 24 32 11 22 29 28 28 30 23 28 51 33 17 36 30 24 29 23 25 34 24 51 25 20 21 28 22 26 23 20 26 19 27 31 20 23 26 17 51 16 17 13 14 32 19 20 28 15 18 16 21 25 21 19 19 12 8 6 7 12 20 25 39 22 19 9 12 19 23 16 17 33 15 24 19 16 10 17 34 20 29 15 26 28 15 25 8 16 6 5 13 5 23 9 19 12 14 25 14 37 12 10 9 23 36 36 9 4 3 34 22 7 5 7 11 8 7 7 10 3 7 8 17 29 14 9 6 5 3 7 11 12 16 14 22 20 13 27 11 26 27 8 9 4 25 19 10 7 7 6 20 21 7 14 30 25 10 24 6 8 5 12 12 5 9 9 4 23 6 20 7 7 5 7 10 22 13 23 12 6 7 13 26 27 5 16 4 5 5 7 4 9 8 3 3 3 16 5 5 6 6 3 9 13 3 4 3 6 8 12 11 6 7 9 14 3 6 4 6 6 7 6 7 20 21 10 3 9 5 3 2 3 6 5 16 3 7 16 15 27 19 5 7 20 5 6 19 9 12 11

Alignment Information

BAC End 1

BAC End 2

seq1: chr2_54143729_54144887
seq2: B6Ng01-166J09.g_68_1214 (reverse)

seq1  AAGTTCAAGAAAAGCATCTTCACAAC-TTCTTGATGTTTTGAGGGCATTT  49
      |||| |||| |||||||| || |||| ||||||| || ||||||||| ||
seq2  AAGTCCAAG-AAAGCATC-TCCCAACTTTCTTGA-GTGTTGAGGGCA-TT  46

seq1  GGGAGTTGTGTTGTAATACAAAAGGTTTGCTATAATTCCCAAAGTTCACA  99
      |||||| |  ||||||||||||||| ||||||| ||||||||  | ||||
seq2  GGGAGTGGGTTTGTAATACAAAAGG-TTGCTAT-ATTCCCAAGTTCCACA  94

seq1  TTTTATTGGAAGAAATAAATGGATGAGATGAACACTGAACACAGTGAGAT  149
      |||   |||||||||||||| ||||||||| |||||||||||||||||||
seq2  TTT--ATGGAAGAAATAAAT-GATGAGATG-ACACTGAACACAGTGAGAT  140

seq1  TTCCTTTTCCTTTGAATTCCTCACACATTACCAGTGTTCTCTAGAGGCCC  199
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TT-CTTTTCCTTTGAATTCCTCACACATTACCAGTGTTCTCTAGAGGCCC  189

seq1  ATGCCTCCTCTGGACACAATCTGTTTGTTCAGGGTTTGAATTTGATCATT  249
      ||||   |||||||||||||||||||||||||||||||||||||||||||
seq2  ATGC--TCTCTGGACACAATCTGTTTGTTCAGGGTTTGAATTTGATCATT  237

seq1  TAAATGACTTACAGTTTTCACCACATTTAATCTTTTGAGAAAAACTGCAT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATGACTTACAGTTTTCACCACATTTAATCTTTTGAGAAAAACTGCAT  287

seq1  TTTCTGGAACAACCTTTATCCTCAGTAGTGAATGTCTTGATACCTTCCAG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGGAACAACCTTTATCCTCAGTAGTGAATGTCTTGATACCTTCCAG  337

seq1  AACCTCTGTGTTTTCATTTCAAAGTACTGGTGGAGAAAGAGCAAAAAGGA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTCTGTGTTTTCATTTCAAAGTACTGGTGGAGAAAGAGCAAAAAGGA  387

seq1  AAAAAAATTAAAAAGGCTATAAATGTGTGACGTGTGATGAGAAACAATTT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAATTAAAAAGGCTATAAATGTGTGACGTGTGATGAGAAACAATTT  437

seq1  CCACCGCTGTCCTTCAGGACCTGAAAGTTTGCATTAGAAATCACCTAACA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCGCTGTCCTTCAGGACCTGAAAGTTTGCATTAGAAATCACCTAACA  487

seq1  GGAGGGTCAGTAAAGTCAACAACTCTTAAGAAAATCTAAAGTAATGTTTC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGGTCAGTAAAGTCAACAACTCTTAAGAAAATCTAAAGTAATGTTTC  537

seq1  TTCATTACTTCCTTTCTTCATGTACACATGAGAATATGTACCTATCCTAG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTACTTCCTTTCTTCATGTACACATGAGAATATGTACCTATCCTAG  587

seq1  GCAAGGAGAACATTCAGTGCTGTATTTAAAGGATGAGATGACATTTTACA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGGAGAACATTCAGTGCTGTATTTAAAGGATGAGATGACATTTTACA  637

seq1  GAGATCCTTTGAGCAGTTGAACTTTGACATGAAAAATGCATGAGAGTAGG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATCCTTTGAGCAGTTGAACTTTGACATGAAAAATGCATGAGAGTAGG  687

seq1  TAATATTAGTGGAAGCAACAGAATAAAAGTTGTTATGACAATTGCAAGTA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATATTAGTGGAAGCAACAGAATAAAAGTTGTTATGACAATTGCAAGTA  737

seq1  TGAGTTACGTCGATGTTTTCATCATGTTCAACAGTGTTCCCAGCCCATTT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTTACGTCGATGTTTTCATCATGTTCAACAGTGTTCCCAGCCCATTT  787

seq1  CCACAGTAGTTTCTCGGGTCATTGTGTCTGTGCTATGGCTCTTCTCACAA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAGTAGTTTCTCGGGTCATTGTGTCTGTGCTATGGCTCTTCTCACAA  837

seq1  CCATTATGCGTGAACTCTTCATTGCTTCATGAGGAAAAACAGTATTTCAT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTATGCGTGAACTCTTCATTGCTTCATGAGGAAAAACAGTATTTCAT  887

seq1  TCCAGTTAAATGCTACAAAAAGGGCAATTAACCTAATTTTTTTTCCTGCT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGTTAAATGCTACAAAAAGGGCAATTAACCTAATTTTTTTTCCTGCT  937

seq1  TGAGAATCACATCATATCACATATTAAAATATTTAACTAGGGTGCCAGGG  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAATCACATCATATCACATATTAAAATATTTAACTAGGGTGCCAGGG  987

seq1  AGAATCATTAAACAGTCATCTGTAGGGAATGGTAAGAAGTGGTGTGAAAC  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATCATTAAACAGTCATCTGTAGGGAATGGTAAGAAGTGGTGTGAAAC  1037

seq1  ACCATTACAGTGCTCATTTATTCTGGGCTCAATGATTCTTTCAAATCATT  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATTACAGTGCTCATTTATTCTGGGCTCAATGATTCTTTCAAATCATT  1087

seq1  AATTTCTGATTAATGTCATCATTGTACCAGGAAAAGTATTCATTTTCCTC  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTCTGATTAATGTCATCATTGTACCAGGAAAAGTATTCATTTTCCTC  1137

seq1  TACAGAATTC  1159
      ||||||||||
seq2  TACAGAATTC  1147

BAC Information

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BAC

BAC End Information

Alignment Information