BAC Information

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BAC

Clone NameB6Ng01-167A23
Chromosome2 (Build37)
Map Location 111,320,679 - 111,460,299
singlet/doubletdoublet
Overlap geneOlfr1289, Olfr1290, GA_x5J8B7W4T2P-95628-96096, Olfr1292-ps1, Olfr1293, Olfr1294, Olfr1295, LOC668822
Upstream geneSlc5a12, Muc15, LOC668802, LOC623270, LOC623301, 4930430A15Rik, Olfr1275, Olfr1276, Olfr1277, Olfr1278, Olfr1279, Olfr1280, Olfr1281, Olfr1282, Olfr1283, Olfr1284, LOC100043465, Olfr1285, Olfr1286, Olfr1287, Olfr1288
Downstream geneOlfr1297, Olfr1298, Olfr1299, Olfr1300-ps1, Olfr1301, Olfr1302, Olfr1303, Olfr249-ps1, LOC668825, Olfr1305, Olfr1306, LOC668827, Olfr1307, Olfr1308, Olfr1309, LOC433463, Olfr1310, Olfr1311, Olfr1312, Olfr1313, Olfr1314, Olfr1315-ps1, Olfr1316, Olfr1317, Olfr1318, GA_x5J8B7W3P0G-705890-705633, LOC100043187, Agpat7, Nut, Nola3, Slc12a6, Tmem85, EG668839, 2410042D21Rik, 2900064A13Rik, Chrm5, Aven
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-167A23.bB6Ng01-167A23.g
ACCDH958660DH958661
length1,0891,062
definitionDH958660|Mus musculus domesticus DNA, BAC clone: B6Ng01-167A23, 5' end.DH958661|Mus musculus domesticus DNA, BAC clone: B6Ng01-167A23, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(111,320,679 - 111,321,788)(111,459,232 - 111,460,299)
sequence
gaattcttcagaagaaaccagaaacgcatagtagtcaagaagcacaactt
gagacaagtcttaaatgagtttcttagatgtgatttagaaacctagctgt
ttatctcagctcatttaaatgtcttcatggtaactaaagcataaaaaaaa
aactcatatgaactgaggttttataaattattcagggaatttttgatatg
ctctcctcatactggctatcaatgtctttgaattattctctttatgaaat
tgaaatattatcattcactgcctgatttatttgtgtagattttaattctg
taatattaccttatttgtttacaatgggatttatttatttttttgcaatc
acactttgagtgagatggtaaaattgtgcagtgatctaagaaactgcaac
aatgtcccttaactcaggaataacccatgcttctgccaaaggacaaggga
acgcctatgacactgcatcagtctgccagtttccttgcgactgtttctgg
atcctccatgggcttctggttacttcagaaatgcttatcattagccaagc
agtttgctcaggaggacaattgtataaaagccaaagtcccagaaatgtta
atgctttaaagtgtgtttaagagagactctgtactgttctgtctcttaag
attactgctgtctcttcaagttatgaaagaggtaagtggaataacaaaat
tgacattaatcagtggatgcaactatgggcaaaattttcattggtagtgt
aatgcttctatgagtagaaactcactctgcagaactaatttttttcttca
ggaaaaaaaatatcctgtagggttgcttaaattcttagaagttttaacat
gactaatattaaaaggataacccatattatcagtgttgtagtgcaataat
tattgagttctacacctaaatttactaattaaacatatcctttactctct
gtgatgctgttctatttagttcttctacaaacaaacataccctagtattt
tctgtcatgctttttttttccctaatatcaaggaaaatagtttgacattt
ctttcacatagagtcgcaaataggtacactatgtcaatc
gaattcaatggccttactcaatgctggaaattgcatgggaaaatacagag
ctacctggcaagatgtgtccagtactgtagacaaatttggctgtagtcta
atgggaaccaactattttttaatgcctcttccaaaggagagaatttatac
ctagtgctgtaaagttcagtaaattagaaaccattcaagcagtttattag
tttcagattttatatttagtgtatttaactcatttggagttgactttttt
tttttttaaactccagatttaccaacattggctaaagattctgtttctgt
ttcatgtattattttgtcatctttgctgaaagccagggcattgtaaattt
gttgacttaagtaaaaatcttctagtgtataatattaatttagtcaatgg
tagacaacaataactttgctgtgctcttttgattattattgctttgtcgt
ataacttgagctcatgtataataatccagtgtgcacttttgtttgttttt
atattttgttattggttttgctcatgaatgctctagtgacctttatattt
ccaaatagttcttattcaggacctttttaaaatgtgattgtgattattta
agaagtgatatttttatactgtttgtctttttgttgtaggatgttatctt
caggatttaggttagttaaaaaatttattgattattatatttatttacat
ttctaatgttgtccccttcccagtttcctatcttaaacccctgcattcca
gactctttcccctttgcctctttgagggtccttcgccatccacccatcca
tttgtgtgtcactgatctaacactcccttatgctgggttttctagcctcc
caggatcaagagcttcccctcttactgatgccagaaaatgcaatcctctg
ctatacatgtaattggagctatgcatccctccatgtgtactctttggttg
gtggttagtcttgggaactctgggggtgcagatctggttatttatctatg
ggagttgcaatcccttcagctccttcagtcttcccctagccttccaatgg
ggcccatgctca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_111320679_111321788
seq2: B6Ng01-167A23.b_48_1136

seq1  GAATTCTTCAGAAGAAACCAGAAACGCATAGTAGTCAAGAAGCACAACTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCAGAAGAAACCAGAAACGCATAGTAGTCAAGAAGCACAACTT  50

seq1  GAGACAAGTCTTAAATGAGTTTCTTAGATGTGATTTAGAAACCTAGCTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACAAGTCTTAAATGAGTTTCTTAGATGTGATTTAGAAACCTAGCTGT  100

seq1  TTATCTCAGCTCATTTAAATGTCTTCATGGTAACTAAAGCATAAAAAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCTCAGCTCATTTAAATGTCTTCATGGTAACTAAAGCATAAAAAAAA  150

seq1  AACTCATATGAACTGAGGTTTTATAAATTATTCAGGGAATTTTTGATATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCATATGAACTGAGGTTTTATAAATTATTCAGGGAATTTTTGATATG  200

seq1  CTCTCCTCATACTGGCTATCAATGTCTTTGAATTATTCTCTTTATGAAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCCTCATACTGGCTATCAATGTCTTTGAATTATTCTCTTTATGAAAT  250

seq1  TGAAATATTATCATTCACTGCCTGATTTATTTGTGTAGATTTTAATTCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATATTATCATTCACTGCCTGATTTATTTGTGTAGATTTTAATTCTG  300

seq1  TAATATTACCTTATTTGTTTACAATGGGATTTATTTATTTTTTTGCAATC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATATTACCTTATTTGTTTACAATGGGATTTATTTATTTTTTTGCAATC  350

seq1  ACACTTTGAGTGAGATGGTAAAATTGTGCAGTGATCTAAGAAACTGCAAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTTTGAGTGAGATGGTAAAATTGTGCAGTGATCTAAGAAACTGCAAC  400

seq1  AATGTCCCTTAACTCAGGAATAACCCATGCTTCTGCCAAAGGACAAGGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTCCCTTAACTCAGGAATAACCCATGCTTCTGCCAAAGGACAAGGGA  450

seq1  ACGCCTATGACACTGCATCAGTCTGCCAGTTTCCTTGCGACTGTTTCTGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGCCTATGACACTGCATCAGTCTGCCAGTTTCCTTGCGACTGTTTCTGG  500

seq1  ATCCTCCATGGGCTTCTGGTTACTTCAGAAATGCTTATCATTAGCCAAGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTCCATGGGCTTCTGGTTACTTCAGAAATGCTTATCATTAGCCAAGC  550

seq1  AGTTTGCTCAGGAGGACAATTGTATAAAAGCCAAAGTCCCAGAAATGTTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTGCTCAGGAGGACAATTGTATAAAAGCCAAAGTCCCAGAAATGTTA  600

seq1  ATGCTTTAAAGTGTGTTTAAGAGAGACTCTGTACTGTTCTGTCTCTTAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTTTAAAGTGTGTTTAAGAGAGACTCTGTACTGTTCTGTCTCTTAAG  650

seq1  ATTACTGCTGTCTCTTCAAGTTATGAAAGAGGTAAGTGGAATAACAAAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACTGCTGTCTCTTCAAGTTATGAAAGAGGTAAGTGGAATAACAAAAT  700

seq1  TGACATTAATCAGTGGATGCAACTATGGGCAAAATTTTCATTGGTAGTGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACATTAATCAGTGGATGCAACTATGGGCAAAATTTTCATTGGTAGTGT  750

seq1  AATGCTTCTATGAGTAGAAACTCACTCTGCAGAACTAATTTTTTTCTTCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCTTCTATGAGTAGAAACTCACTCTGCAGAACTAATTTTTTTCTTCA  800

seq1  GGAAAAAAAATATCCTGTAGGGTTGCTTAAATTCTTAGAAGTTTTAACAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAAAAAATATCCTGTAGGGTTGCTTAAATTCTTAGAAGTTTTAACAT  850

seq1  GACTAATATTAAAAGGATAACCCATATTATCAGTGTTGTAGTGCAATAAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTAATATTAAAAGGATAACCCATATTATCAGTGTTGTAGTGCAATAAT  900

seq1  TATTGAGTTCTACACCTAAATTTACTAATTAAACATATCCTTTACTCTCT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGAGTTCTACACCTAAATTTACTAATTAAACATATCCTTTACTCTCT  950

seq1  GTGATGCTGTTCTATTTAGTTCTTCTTACAAAACAAAACAATACCCTAGT  1000
      ||||||||||||||||||||||||| ||| |||||||   ||||||||||
seq2  GTGATGCTGTTCTATTTAGTTCTTC-TAC-AAACAAA--CATACCCTAGT  996

seq1  ATTTTCTTGTTCCATGCTTTTTTTTTCCCCTAATTAATCCAAGGGAAAAA  1050
      |||||| |||  |||||||||||||| |||||||  || |||||  ||||
seq2  ATTTTC-TGT--CATGCTTTTTTTTT-CCCTAAT--AT-CAAGG--AAAA  1037

seq1  TAGTTTTGAACATTTCTTTCACATAGGAGTCGCAAATATAGTGTTACAAC  1100
      ||||||   |||||||||||||||| ||||||||||||    | ||| ||
seq2  TAGTTT--GACATTTCTTTCACATA-GAGTCGCAAATA----GGTAC-AC  1079

seq1  TATGTAAATC  1110
      ||||| ||||
seq2  TATGTCAATC  1089

seq1: chr2_111459232_111460299
seq2: B6Ng01-167A23.g_63_1124 (reverse)

seq1  TGAGCATGGGGACCCCAATGGAAGAGCTAGGGGAAGGACTGAAGGAGCTG  50
      ||||||||||  ||||| |||||| |||||||||| ||||||||||||||
seq2  TGAGCATGGG--CCCCATTGGAAG-GCTAGGGGAA-GACTGAAGGAGCTG  46

seq1  AAAGGAATTGCAACT-CCATAGGTAAAATAACAGAACTGCACCCCCAGAG  99
       |||| ||||||||| |||||| ||||  | |||| ||||||||||||||
seq2  -AAGGGATTGCAACTCCCATAGATAAATAACCAGATCTGCACCCCCAGAG  95

seq1  CTCCCAAAGACTAAACCACCAACCAAAGAGTACACATGGAGGGATGCATA  149
       |||| |||||| |||||||||||||||||||||||||||||||||||||
seq2  TTCCC-AAGACT-AACCACCAACCAAAGAGTACACATGGAGGGATGCATA  143

seq1  GCTCCAATTACATGTATAGCAGAGGATTGCATTATCTGGCATCAGTAAGA  199
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  GCTCCAATTACATGTATAGCAGAGGATTGCATTTTCTGGCATCAGTAAGA  193

seq1  GGGGAAGCTCTTGATCCTGGGAGGCTAGAAAACCCAGCATAAGGGAGTGT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGAAGCTCTTGATCCTGGGAGGCTAGAAAACCCAGCATAAGGGAGTGT  243

seq1  TAGATCAGTGACACACAAATGGATGGGTGGATGGCGAAGGACCCTCAAAG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATCAGTGACACACAAATGGATGGGTGGATGGCGAAGGACCCTCAAAG  293

seq1  AGGCAAAGGGGAAAGAGTCTGGAATGCAGGGGTTTAAGATAGGAAACTGG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAAAGGGGAAAGAGTCTGGAATGCAGGGGTTTAAGATAGGAAACTGG  343

seq1  GAAGGGGACAACATTAGAAATGTAAATAAATATAATAATCAATAAATTTT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGGGACAACATTAGAAATGTAAATAAATATAATAATCAATAAATTTT  393

seq1  TTAACTAACCTAAATCCTGAAGATAACATCCTACAACAAAAAGACAAACA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACTAACCTAAATCCTGAAGATAACATCCTACAACAAAAAGACAAACA  443

seq1  GTATAAAAATATCACTTCTTAAATAATCACAATCACATTTTAAAAAGGTC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATAAAAATATCACTTCTTAAATAATCACAATCACATTTTAAAAAGGTC  493

seq1  CTGAATAAGAACTATTTGGAAATATAAAGGTCACTAGAGCATTCATGAGC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAATAAGAACTATTTGGAAATATAAAGGTCACTAGAGCATTCATGAGC  543

seq1  AAAACCAATAACAAAATATAAAAACAAACAAAAGTGCACACTGGATTATT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACCAATAACAAAATATAAAAACAAACAAAAGTGCACACTGGATTATT  593

seq1  ATACATGAGCTCAAGTTATACGACAAAGCAATAATAATCAAAAGAGCACA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACATGAGCTCAAGTTATACGACAAAGCAATAATAATCAAAAGAGCACA  643

seq1  GCAAAGTTATTGTTGTCTACCATTGACTAAATTAATATTATACACTAGAA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAGTTATTGTTGTCTACCATTGACTAAATTAATATTATACACTAGAA  693

seq1  GATTTTTACTTAAGTCAACAAATTTACAATGCCCTGGCTTTCAGCAAAGA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTTTACTTAAGTCAACAAATTTACAATGCCCTGGCTTTCAGCAAAGA  743

seq1  TGACAAAATAATACATGAAACAGAAACAGAATCTTTAGCCAATGTTGGTA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAAAATAATACATGAAACAGAAACAGAATCTTTAGCCAATGTTGGTA  793

seq1  AATCTGGAGTTTAAAAAAAAAAAAAGTCAACTCCAAATGAGTTAAATACA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTGGAGTTTAAAAAAAAAAAAAGTCAACTCCAAATGAGTTAAATACA  843

seq1  CTAAATATAAAATCTGAAACTAATAAACTGCTTGAATGGTTTCTAATTTA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAATATAAAATCTGAAACTAATAAACTGCTTGAATGGTTTCTAATTTA  893

seq1  CTGAACTTTACAGCACTAGGTATAAATTCTCTCCTTTGGAAGAGGCATTA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAACTTTACAGCACTAGGTATAAATTCTCTCCTTTGGAAGAGGCATTA  943

seq1  AAAAATAGTTGGTTCCCATTAGACTACAGCCAAATTTGTCTACAGTACTG  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATAGTTGGTTCCCATTAGACTACAGCCAAATTTGTCTACAGTACTG  993

seq1  GACACATCTTGCCAGGTAGCTCTGTATTTTCCCATGCAATTTCCAGCATT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACATCTTGCCAGGTAGCTCTGTATTTTCCCATGCAATTTCCAGCATT  1043

seq1  GAGTAAGGCCATTGAATTC  1068
      |||||||||||||||||||
seq2  GAGTAAGGCCATTGAATTC  1062