BAC Information

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BAC

Clone NameB6Ng01-167C12
Chromosome7 (Build37)2 (Build37)
Map Location 33,220,382 - 33,221,099150,815,849 - 150,816,381
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC626181, LOC100043334, LOC100043834, LOC546947, LOC677233, LOC100043337, LOC546949, LOC100043836, EG626305, EG668342, EG626330, LOC100043340, LOC100043343, EG626358, LOC668351, EG384593, LOC100043351, LOC100043352, LOC100043353, EG384594, LOC100043838, EG668361, LOC668362, EG624584, LOC100043355, LOC546951, EG626740, EG668371, EG668377, LOC100043842, LOC634929, EG668379, EG668381, LOC668386, LOC626373
Downstream geneEG384589, EG668393, EG330689, LOC100043362, LOC100043365, EG384591, LOC668398, EG384596, LOC100043370, LOC434161, EG270499, LOC100043845, LOC100043373, LOC668410, EG624439, LOC100043376, LOC100043379, LOC100043383, EG668411, LOC100043850, LOC100043386, LOC668416, EG668526, LOC100043388, LOC270234, EG668419, EG668422, EG546954, LOC100043856, LOC100043857, EG545947, EG434676, EG668431, Abpd, EG545948, LOC435963, LOC435962
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-167C12.bB6Ng01-167C12.g
ACCDH958728DH958729
length1,012527
definitionDH958728|Mus musculus domesticus DNA, BAC clone: B6Ng01-167C12, 5' end.DH958729|Mus musculus domesticus DNA, BAC clone: B6Ng01-167C12, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(33,220,382 - 33,221,099)(150,815,849 - 150,816,381)
sequence
gaattcctgatctttccaagacttttatcatgaatgggtgttggatcttg
tcgaatgctttttccacacctaaggagatgatcatgtggtttttgtcttt
gagtttgttaatataatggattacattgatggatttccgtatattaaacc
atccctgcatccctggaatgaaacctacttggtcaggatggatgattgct
ttaatgtgttcttggattcggttagcgagaattttattgaggatatttgc
atctatattcataagggaaattggcctgaagttctctatctttgttggat
ctttctgtggtttaggcattagaataactgtggcttcatagaacaagttg
ggtagagttccttctacttctattttgtggtatagtttgtgcagaactgg
aattagattgtctttgaaggtctggtagaactctgcagtaaacacatctg
gtcctgggcttttttttggctgggagactattaatgactgcttctatctc
tttaggggatatgggactgtttagatcgttaacttgatcctgacttaact
ttggtacctggtatctgtctagaaacttgtccatttcatccaggttttcc
aattttgtggagtatagccttttgtagaaggatctgatggtatcttggat
tactttcaggatctgttgttatgtttcccttttcatttctgattttgtta
attaggctgctgtccctgtgccctctagtgagtctagctaagggtttgtc
tatcttgttgattttctcaaagaaccaactccgagtttggttaattcttt
gaatacttcttcttgtttccacttggttgatttcacccctgagtttgatt
attcctgccgtctactcctcttgggtgaattttcttcctttttttctaag
taatttagatgtgttgtcaggctgctagtgtgtgctctctccagtttctt
ttggagcactcagagctatgagtttcctctagggagattctgtctttatt
taatgtctgttt
agtgggagaggggatggggaggggactgtgggaggatcaggttcacatgt
gggagagagtaggagagaggttcctgaatggaaatctgtagctggcaatg
ggggaggtcatttctaggatgtgcctgagacctggggttggagagattcc
cccgtatcttttagttgactccttagggtgtgactctagttgagactcct
tgaaatgagggatatgaaacctgaagtgggcacctccagtgttgcagggg
ccggggtggtggtggcagggaaatgatggtaaaacagatgagatcccctg
atatgacagtgtggcccatggtgactcgccctattcccaccaagtataaa
cacccagagactctcaaatgtggttaaggagaaactggattcctctacct
cctgaccctattctctaataaaaactatttggcttattttggtcagtttt
accacattactggtacctggcatacacttgctcttgctgcccctgctgct
gctaccttgttatctccatctcaggct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_33220382_33221099
seq2: B6Ng01-167C12.b_48_766 (reverse)

seq1  ACAGGGACAACATCCTATTTAACAAAATCAGAAATGAAAAGGGAGACATA  50
      ||||||||| || |||| |||||||||||||||||||||||||| |||||
seq2  ACAGGGACAGCAGCCTAATTAACAAAATCAGAAATGAAAAGGGAAACATA  50

seq1  ACAACAGATCCTG-GAGAAATCCAAAACACCATCGGATCCTTCTACAAAA  99
      |||||||||||||  || ||||||| | |||||| |||||||||||||||
seq2  ACAACAGATCCTGAAAGTAATCCAAGATACCATCAGATCCTTCTACAAAA  100

seq1  GGATATACTCAACAAAACTGGAAAACCTGGATGAAATGGACAAATTTCTA  149
      || ||||||| |||||| ||||||||||||||||||||||||| ||||||
seq2  GGCTATACTCCACAAAATTGGAAAACCTGGATGAAATGGACAAGTTTCTA  150

seq1  GACAGATACCAGGTACCAAAGTTAAATCAGGATCAATTTAACGATCTAAA  199
      ||||||||||||||||||||||||| |||||||||| |||||||||||||
seq2  GACAGATACCAGGTACCAAAGTTAAGTCAGGATCAAGTTAACGATCTAAA  200

seq1  CATTCCCATATCCCCTAAAGAAATAGAATCAGTCATTAGTAGTCTCCCAG  249
      || |||||||||||||||||| |||||| ||||||||| |||||||||||
seq2  CAGTCCCATATCCCCTAAAGAGATAGAAGCAGTCATTAATAGTCTCCCAG  250

seq1  CCAAAAAAAAGCCCAGGACCAGATGGGTTTAGTGCAGAGTTCTACCAGAC  299
      ||||||||||||||||||||||||| ||||| ||||||||||||||||||
seq2  CCAAAAAAAAGCCCAGGACCAGATGTGTTTACTGCAGAGTTCTACCAGAC  300

seq1  CTTCAAAGAAGATCTAATTCCAGTTCTGCATAAAGTATTCCACAAAATAG  349
      |||||||||  ||||||||||||||||||| ||| ||| |||||||||||
seq2  CTTCAAAGACAATCTAATTCCAGTTCTGCACAAACTATACCACAAAATAG  350

seq1  AAGTAGATGGAACTCTACCCAACTCATTCTATGAAGCCACAATTACTCTG  399
      ||||||| ||||||||||||||||  ||||||||||||||| ||| ||| 
seq2  AAGTAGAAGGAACTCTACCCAACTTGTTCTATGAAGCCACAGTTATTCTA  400

seq1  ATACCTAAACCACAGAAAGATCCAAAAAAGATAGAGAACTTCAGACCAAT  449
      || |||||||||||||||||||||| |||||||||||||||||| |||||
seq2  ATGCCTAAACCACAGAAAGATCCAACAAAGATAGAGAACTTCAGGCCAAT  450

seq1  TTCCCTTATGAATATAGATGCAAAAATCCTCAATAAAATTCTCGCTAACC  499
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  TTCCCTTATGAATATAGATGCAAATATCCTCAATAAAATTCTCGCTAACC  500

seq1  GAATCCAAGAACACATTAAAGCAATCATCCATCCTGACCAAGTAGGTTTT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  GAATCCAAGAACACATTAAAGCAATCATCCATCCTGACCAAGTAGGTTTC  550

seq1  ATTCCAGGGATGCAGGGATGGTTTAATATTCGGAAATCCATCAACGTAAT  599
      ||||||||||||||||||||||||||||| |||||||||||||| |||||
seq2  ATTCCAGGGATGCAGGGATGGTTTAATATACGGAAATCCATCAATGTAAT  600

seq1  CCATTATATAAACAAACTCAAAGACAAAAACCACATGATCATCTCGTTAG  649
      ||||||||| ||||||||||||||||||||||||||||||||||| ||||
seq2  CCATTATATTAACAAACTCAAAGACAAAAACCACATGATCATCTCCTTAG  650

seq1  ATGCGGAAAAAGCATTCGACAAGATCCAACACCCATTCATGATAAAAGTC  699
       || ||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGGAAAAAGCATTCGACAAGATCCAACACCCATTCATGATAAAAGTC  700

seq1  TTGGAAAGATCAGGAATTC  718
      |||||||||||||||||||
seq2  TTGGAAAGATCAGGAATTC  719

seq1: chr2_150815849_150816381
seq2: B6Ng01-167C12.g_69_601

seq1  GAATTCAGTGGGAGAGGGGATGGGGAGGGGACTGTGGGAGGATCAGGTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTGGGAGAGGGGATGGGGAGGGGACTGTGGGAGGATCAGGTTC  50

seq1  ACATGTGGGAGAGAGTAGGAGAGAGGTTCCTGAATGGAAATCTGTAGCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGTGGGAGAGAGTAGGAGAGAGGTTCCTGAATGGAAATCTGTAGCTG  100

seq1  GCAATGGGGGAGGTCATTTCTAGGATGTGCCTGAGACCTGGGGTTGGAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATGGGGGAGGTCATTTCTAGGATGTGCCTGAGACCTGGGGTTGGAGA  150

seq1  GATTCCCCCGTATCTTTTAGTTGACTCCTTAGGGTGTGACTCTAGTTGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCCCCCGTATCTTTTAGTTGACTCCTTAGGGTGTGACTCTAGTTGAG  200

seq1  ACTCCTTGAAATGAGGGATATGAAACCTGAAGTGGGCACCTCCAGTGTTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCTTGAAATGAGGGATATGAAACCTGAAGTGGGCACCTCCAGTGTTG  250

seq1  CAGGGGCCGGGGTGGTGGTGGCAGGGAAATGATGGTAAAACAGATGAGAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGGCCGGGGTGGTGGTGGCAGGGAAATGATGGTAAAACAGATGAGAT  300

seq1  CCCCTGATATGACAGTGTGGCCCATGGTGACTCGCCCTATTCCCACCAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTGATATGACAGTGTGGCCCATGGTGACTCGCCCTATTCCCACCAAG  350

seq1  TAGAAACACCCAGAGACACTCAAATGTGGTTAAGGAGAAACTGGATTCCT  400
      || |||||||||||||| ||||||||||||||||||||||||||||||||
seq2  TATAAACACCCAGAGACTCTCAAATGTGGTTAAGGAGAAACTGGATTCCT  400

seq1  CTACCTCCTGACCCTATTCTCTAATAAAAACTATTTGGCTTATTTTGGTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCTCCTGACCCTATTCTCTAATAAAAACTATTTGGCTTATTTTGGTC  450

seq1  AGTTTTACCACAAAACTGGTACCTGGCATACACTTGCTCTTGCTGCCCCT  500
      ||||||||||||  ||||||||||||||||||||||||||||||||||||
seq2  AGTTTTACCACATTACTGGTACCTGGCATACACTTGCTCTTGCTGCCCCT  500

seq1  GCTGCTGCTACCTTGTTATCTCCATCGCAGGCT  533
      |||||||||||||||||||||||||| ||||||
seq2  GCTGCTGCTACCTTGTTATCTCCATCTCAGGCT  533