BAC Information

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BAC

Clone NameB6Ng01-167N18
Chromosome2 (Build37)
Map Location 136,580,785 - 136,581,840
singlet/doubletsinglet
Overlap geneSnap25
Upstream genePlcb4, 6330527O06Rik, Pak7, LOC668910, LOC100043492, BC034902, Ankrd5, LOC668911
Downstream geneMkks, 2210009G21Rik, Jag1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-167N18.bB6Ng01-167N18.g
ACCDH959247DH959248
length1,2291,053
definitionDH959247|Mus musculus domesticus DNA, BAC clone: B6Ng01-167N18, 5' end.DH959248|Mus musculus domesticus DNA, BAC clone: B6Ng01-167N18, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaggcccatacctaaacataataaaagcaatatacagcaaacca
gtagccagcatcaaagtaaatggtgagaagctggaagcaatcctactaaa
atcagggactagacaaggctgcccactttctctctacctattcaacatag
tacttgtagtcctagccagagcaaaatcaacaacaaaaggagatgaaggg
gatacaaattggaaaggaagaagtcaaaatatcactttttgcagatgata
tgatagtatatataagtgaccctaaaaattccaccagagaactcctaaac
ctgataaacagcttcaatgcagtagctggatataaaattaactcaaacaa
gtcagtggccgttctctacacaaaggataaacagtgtgagaaagaaatta
gggagacaacacccttcacaatagtcacaaataatagaaaatatcttgat
gtgactctatggaagtgaaaaatttgtctgataaaaatttcaagtctctg
aagaaagaaattgaagatctcagaagatggaaagatctcccatgctcatg
gattggcaggattaaaaaagtcaaaatggctatcctgccaaaagcaatct
actgattcaatgcaatccccatcaaaattcaattcttcactgagttagat
agggcaatatgcaaattcatctggagtaacaaaaaacctacgatagcaaa
aactattctcaacaataaaagaatctctgggggaatcaccatgcctgacc
tcaagctgtactacaaagcaacctacaaaacaaaggtaataaaaactgca
tggtagtggtacagcgacaaacaggaagatcaatggaatagaattgaaga
cccagaaatgaacccacacacctatggtcacttcatctttgacaagggag
ctaaaaccatccagtggaaaaaagacagcattttcacaaatggtgctggc
acaactggtggttatcatgtagaagaatgcgaattgatccattcttatct
ccttgtacaaagctcagtcgaagtggatcaaagactctcacataaaacca
gaagaactgaaatttttagaggaaattggtgaaagcctcaagaacttggc
acagagaaaagttctaacagacagcatggcctcatgctgggatgagatcg
acaattggacctcatatggcagcttctgtaagcaaagatatcttttctca
taagtaccaatagtaggccgctcactcag
gaattcacattttctgttcatcagtgtatccctagtactctttgtaagta
cttgagaattgagaaggatggaaaggaagaaagaagggtgctctggaaca
attagtgtcctcttacttgcatttgtttcatgtgaaatgtcaaggatagc
cacaaagtgggctggtcacattttaaggccctggactcactccactttgg
aataagacttgtttacctgcacacaatcttgacaacctctaatgacaatt
ctagatgcttctaaatatggtgccctgctacccacaaacaaatagtaatg
gtctagtaattgtgcaaaaaaaataaatgtagtaaatctcaaaataatta
taccaagtacaaaagccaggcaaatcatagtgcatgctaagtcatgtcat
taatacataatcctaagaaatgccagcaatagtgacaaaaaggagatcag
cagtctcttggacatgggagggtatggagaataacaggtataataacaag
gagaatgtgaaaatgtgggggttaatcgattggttcattttctttttaga
gtggtggggttcctgagtatattgcatgtgtcaaaatttcacaaactata
caaattgtgaagtggttagtatgtcaattataattgtctgtactctccac
ctcatcattcccaagccttgctggtttgtgttttaaaaatatttcagatg
aagccatatgcgtcttcgtaaacctgggatcctagaacacttaggagact
ggagcagaaagatggttagcccaaagccaacctgggctacaatacaaact
gtcagaaaaaatcatatgtaaatatgtgtctgttcctgtgaggaggctga
aaaaaatatctcttcctggcactttttggagaattgacataattctattg
attcttgtctgaatttggcttccagtttagagctgtctgaccctgggggc
agtgaagtgcttataccttccaggtggcacacattcatggagcaccccat
attttcttcttcctaggtttctttaacgaagcaccactgacttgctgccc
aag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_136580785_136581840
seq2: B6Ng01-167N18.g_70_1122

seq1  GAATTCACATTTTCTGTTCATCAGTGTATCCCTAGTACTCTTTGTAAGTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACATTTTCTGTTCATCAGTGTATCCCTAGTACTCTTTGTAAGTA  50

seq1  CTTGAGAATTGAGAAGGATGGAAAGGAAGAAAGAAGGGTGCTCTGGAACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAGAATTGAGAAGGATGGAAAGGAAGAAAGAAGGGTGCTCTGGAACA  100

seq1  ATTAGTGTCCTCTTACTTGCATTTGTTTCATGTGAAATGTCAAGGATAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGTGTCCTCTTACTTGCATTTGTTTCATGTGAAATGTCAAGGATAGC  150

seq1  CACAAAGTGGGCTGGTCACATTTTAAGGCCCTGGACTCACTCCACTTTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAAGTGGGCTGGTCACATTTTAAGGCCCTGGACTCACTCCACTTTGG  200

seq1  AATAAGACTTGTTTACCTGCACACAATCTTGACAACCTCTAATGACAATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAGACTTGTTTACCTGCACACAATCTTGACAACCTCTAATGACAATT  250

seq1  CTAGATGCTTCTAAATATGGTGCCCTGCTACCCACAAACAAATAGTAATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGATGCTTCTAAATATGGTGCCCTGCTACCCACAAACAAATAGTAATG  300

seq1  GTCTAGTAATTGTGCAAAAAAAATAAATGTAGTAAATCTCAAAATAATTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTAGTAATTGTGCAAAAAAAATAAATGTAGTAAATCTCAAAATAATTA  350

seq1  TACCAAGTACAAAAGCCAGGCAAATCATAGTGCATGCTAAGTCATGTCAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCAAGTACAAAAGCCAGGCAAATCATAGTGCATGCTAAGTCATGTCAT  400

seq1  TAATACATAATCCTAAGAAATGCCAGCAATAGTGACAAAAAGGAGATCAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATACATAATCCTAAGAAATGCCAGCAATAGTGACAAAAAGGAGATCAG  450

seq1  CAGTCTCTTGGACATGGGAGGGTATGGAGAATAACAGGTATAATAACAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCTCTTGGACATGGGAGGGTATGGAGAATAACAGGTATAATAACAAG  500

seq1  GAGAATGTGAAAATGTGGGGGTTAATCGATTGGTTCATTTTCTTTTTAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAATGTGAAAATGTGGGGGTTAATCGATTGGTTCATTTTCTTTTTAGA  550

seq1  GTGGTGGGGTTCCTGAGTATATTGCATGTGTCAAAATTTCACAAACTATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTGGGGTTCCTGAGTATATTGCATGTGTCAAAATTTCACAAACTATA  600

seq1  CAAATTGTGAAGTGGTTAGTATGTCAATTATAATTGTCTGTACTCTCCAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATTGTGAAGTGGTTAGTATGTCAATTATAATTGTCTGTACTCTCCAC  650

seq1  CTCATCATTCCCAAGCCTTGCTGGTTTGTGTTTTAAAAATATTTCAGATG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATCATTCCCAAGCCTTGCTGGTTTGTGTTTTAAAAATATTTCAGATG  700

seq1  AAGCCATATGCGTCTTCGTAAACCTGGGATCCTAGAACACTTAGGAGACT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCATATGCGTCTTCGTAAACCTGGGATCCTAGAACACTTAGGAGACT  750

seq1  GGAGCAGAAAGATGGTTAGCCCAAAGCCAACCTGGGCTACAATACAAACT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCAGAAAGATGGTTAGCCCAAAGCCAACCTGGGCTACAATACAAACT  800

seq1  GTCAGAAAAAATCATATGTAAATATGTGTCTGTTCCTGTGAGGAGGCTGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGAAAAAATCATATGTAAATATGTGTCTGTTCCTGTGAGGAGGCTGA  850

seq1  AAAAAATATCTCTTCCTGGCACTTTTTGGAGAATTGACATAATTCTATTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAATATCTCTTCCTGGCACTTTTTGGAGAATTGACATAATTCTATTG  900

seq1  ATTCTTGTCTGAATTTGGCTTCCAGTTTAGAAGCTGTCTGAACCCTGGGG  950
      |||||||||||||||||||||||||||||| ||||||||| |||||||||
seq2  ATTCTTGTCTGAATTTGGCTTCCAGTTTAG-AGCTGTCTG-ACCCTGGGG  948

seq1  GCAGTGAAGTGCTTATACCTTCCAGGTGGCACACATTCATGGAAGCA-CC  999
      |||||||||||||||||||||||||||||||||||||||||| |||| ||
seq2  GCAGTGAAGTGCTTATACCTTCCAGGTGGCACACATTCATGG-AGCACCC  997

seq1  CATATTTTCCTTCTTCCCAGG-TTCTTTAACGAAGCACCACTGACTTGCT  1048
      |||||||| |||||||| ||| ||||||||||||||||||||||||||||
seq2  CATATTTT-CTTCTTCCTAGGTTTCTTTAACGAAGCACCACTGACTTGCT  1046

seq1  GGCCCAAG  1056
       |||||||
seq2  -GCCCAAG  1053