BAC Information

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BAC

Clone NameB6Ng01-168N03
Chromosome2 (Build37)
Map Location 89,323,188 - 89,324,372
singlet/doubletsinglet
Overlap geneOlfr1241
Upstream geneOlfr1184, Olfr1185-ps1, Olfr1186, Olfr1187-ps1, Olfr1188, LOC668528, Olfr1189, GA_x5J8B7W4NS2-37772-38277, Olfr475-ps1, Olfr526-ps1, Olfr1192-ps1, Olfr1193, Olfr1194-ps1, Olfr1195, Olfr1196, Olfr1197, Olfr1198, Olfr1199, Olfr1200, Olfr1201, Olfr1202, Olfr1203, Olfr1204, Olfr1206, Olfr1208, Olfr1209, Olfr1211, Olfr1212, Olfr1213, Olfr1214, Olfr1215, Olfr1216, Olfr1217, Olfr1218, Olfr1219, Olfr1220, Olfr1221, Olfr1222, Olfr1223, Olfr1224-ps1, Olfr1225, LOC435676, Olfr1226, LOC100042983, GA_x5J8B7TTH1T-1160-261, Olfr1227-ps1, Olfr1228, Olfr1229, Olfr1230, Olfr1231, Olfr1232, Olfr1233, Olfr1234, Olfr1235-ps1, GA_x5J8B7W62NC-668773-668438, Olfr1237-ps1, Olfr1238, Olfr1239, Olfr1240
Downstream geneOlfr1242, Olfr1243, Olfr1244-ps1, Olfr1245, Olfr1246, Olfr1247, Olfr1248, Olfr1249, Olfr1541-ps1, Olfr1250, Olfr1251, GA_x5J8B7TT7VM-20-924, Olfr1252, GA_x5J8B7W62NC-992588-991951, Olfr1253-ps1, Olfr1254, Olfr1255, Olfr1256, Olfr48, Olfr1257, Olfr1258, Olfr1259, Olfr1260, Olfr1261, Olfr1262, Olfr1263, Olfr1264, Olfr1265, Olfr140, Olfr1266-ps1, Olfr1267-ps1, Olfr1268-ps1, Olfr1269, Olfr32, LOC100043090, Olfr1270, LOC627525, LOC100043096, Olfr1506, Olfr142, Olfr1271, Olfr1272, Olfr1273, LOC100042690, LOC100043113, LOC668629, GA_x5J8B7W2BV0-3116-4045, Ptprj, 4933423P22Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-168N03.bB6Ng01-168N03.g
ACCDH959961DH959962
length1,2781,165
definitionDH959961|Mus musculus domesticus DNA, BAC clone: B6Ng01-168N03, 5' end.DH959962|Mus musculus domesticus DNA, BAC clone: B6Ng01-168N03, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctctgtttagctcagttccccatttattaatagggttatttgttc
ctcttcttaacaatgaaacaatttctggaggaatcaccatcgttttcctc
aagctgtgctacagagcaatagtgataaaaaataaacaaacaaacacaca
aacaaacaaaaaaccttcatggtattggtacagacacagactgggtgatc
aatggaatcaaattgaagacccagaaataaatccacacacttatggacac
ttgatctttaacatagaagccaaaaatacacaatggaaaaaagaaagcat
cttgaataaatagtgctggtctaactggcagtgtatatgcagaaaattga
aaatgtgtgtatgcagaaaattgaaaatgtatccatatctgtcaccttga
acaaaactcaagtccaagtggattaaggacttccacataaaaccacatat
actgaacctaatagaagagaaagtgagaaagagcctagaattcattggca
tggggttggatagggctgggggacattttctaaacagaactacaatggtg
cacgttctaagatcaggaattgataaatgagacctcatgaaactgaaaac
cttttgtaaggtaaaggacatagtcaataagacaaattgacaacctacac
attgggaaaaaatcttcactatccccacatctgataaagggctaatatcc
aaaatatataaagaacttgagaggctaaactccaaaacacctaacaacct
agccaaaaaatagggtacagagttaaacagagaattcaaaatagaagaat
ctggaatggctgggaagcacttaaggaaatgtttaaagtccttagtcatc
aggaaaatgcaaatcaaaaagaccctgagattccaccttagaccaatcag
aaagactaaggtcaaaaactcagtgacagcacatgctagcaagaatgtgt
agaaagaggaacactcctccattgctggtgggagtacaaactggtacagc
actctggaaatcaatctggaggttcctcagaaaaatagaaaaagatctac
ctgaagaccagctacatcactctggcatatacaaaagatgcccacataca
tagaagacatgtgatccactatgctaatagtcaagctaagcacaaacatt
gttctctggataatggattacgaaatgtggattcattccaattgaaatcc
tattctcattagaacaagaaccctcatggagttgtgcgaggcacaaatgt
gatgggaagatgtgaaaaattcatttgc
gaattctcagtgaaggtaatggttcaaggaatagaattttggctatttga
aagccctaaagagtcaaataaaataagtgctacagacataaatgggataa
ttaatttattagttatatgagactatttaaattcagtcctcattaaatcc
attgaaaaagttttgaaggctggaagttcattgagatacccttgtcaata
tctagtaccacaatctaataccaatgaaatggatgcttgaagagatcaag
attacattttaaagataaactccatccatcctaaggaaagactatattag
tcaatagagtaatggcccatttacgatcttgaaagatttctcaaaaatat
ctgccttgagtttgctttttatggctaacagatgtgctaaaaagtcacat
tttaaacaagaagaatgaggtacagctcttcaatgacatctttctttaaa
gtttttttatatataactaggttttggattaacacaatgatagattttta
tcatgccatcttcatacatataaatcactctaattttcttggttattgct
ataattttcctttcctcactttagctgctcattttgctttcttccatttg
ttgttgatttgtttcctcatcatacacactccagtaatctatttgtcact
ttacctaagatctcttttaataatgcaccttattttctacagaaataaga
acaatacaaccccaaagcagtagataccaaaaaataattaagacatggca
ttcatgaatgatatagagagaagaatatatagagttggtcaaaaagataa
ttctttgaaaaataagaataacaagatgaataaaattctagctaaactac
ccactgtatcttgatatatgacattatatttgtaggctcaacaaaatcct
cttaggcgaaggagttaatagaagatgtatggggatcattggagaagtag
aaatggttatctatgggacagataatgatgattgtgctatgccatagtga
actgatggtcaggatcacacgtcaggcaggtctgttcagagctttcatca
gtaatcagactttcaagaagtcattgggaagagaagcatgtcacaggtca
tttcctcctggcctcactcagatcatgttgacaagagccatgtgcatgtt
ttactcactacattg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_89323188_89324372
seq2: B6Ng01-168N03.g_69_1233 (reverse)

seq1  CAATGTAGATGAGTAAAAACATGACAAACAATGCTCTTTGTCCAACATGA  50
      |||||||| ||||| ||||||||    |||  |||| |||| ||||||||
seq2  CAATGTAG-TGAGT-AAAACATG---CACATGGCTC-TTGT-CAACATGA  43

seq1  TCTTGAGTGAGGCCCAGGAG--AATGAACTCTGTGACATTGCTTCTCTGT  98
      || ||||||||| |||||||  |||||   |||||||| ||||||||| |
seq2  TC-TGAGTGAGG-CCAGGAGGAAATGA--CCTGTGACA-TGCTTCTCT-T  87

seq1  CCCATTGACCTTCTTGAAAGTCTTGATTTACTGATGAAAGCTCTTGAACA  148
      |||| ||| ||||||||||||| ||| |||||||||||||||| ||||||
seq2  CCCAATGA-CTTCTTGAAAGTC-TGA-TTACTGATGAAAGCTC-TGAACA  133

seq1  GACCCTGCCTTGACGTTGTGATCTTGACCATCAGTTCACTATGGCATTAA  198
      || |||||| ||||| ||||||| |||||||||||||||||||||||  |
seq2  GA-CCTGCC-TGACG-TGTGATCCTGACCATCAGTTCACTATGGCAT--A  178

seq1  GCAC-ATCATCATTATCTGTCCCATAGATAACCATTTCTACTTCTTCCAA  247
      |||| ||||||||||||||||||||||||||||||||||||||| |||||
seq2  GCACAATCATCATTATCTGTCCCATAGATAACCATTTCTACTTC-TCCAA  227

seq1  TGATCCCCATACATCTTCTATTAACTCCTTCGCCTAAGAGGATTTTGTTG  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCCCCATACATCTTCTATTAACTCCTTCGCCTAAGAGGATTTTGTTG  277

seq1  AGCCTACAAATATAATGTCATATATCAAGATACAGTGGGTAGTTTAGCTA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTACAAATATAATGTCATATATCAAGATACAGTGGGTAGTTTAGCTA  327

seq1  GAATTTTATTCATCTTGTTATTCTTATTTTTCAAAGAATTATCTTTTTGA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTTTATTCATCTTGTTATTCTTATTTTTCAAAGAATTATCTTTTTGA  377

seq1  CCAACTCTATATATTCTTCTCTCTATATCATTCATGAATGCCATGTCTTA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACTCTATATATTCTTCTCTCTATATCATTCATGAATGCCATGTCTTA  427

seq1  ATTATTTTTTGGTATCTACTGCTTTGGGGTTGTATTGTTCTTATTTCTGT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTTTTTGGTATCTACTGCTTTGGGGTTGTATTGTTCTTATTTCTGT  477

seq1  AGAAAATAAGGTGCATTATTAAAAGAGATCTTAGGTAAAGTGACAAATAG  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAATAAGGTGCATTATTAAAAGAGATCTTAGGTAAAGTGACAAATAG  527

seq1  ATTACTGGAGTGTGTATGATGAGGAAACAAATCAACAACAAATGGAAGAA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACTGGAGTGTGTATGATGAGGAAACAAATCAACAACAAATGGAAGAA  577

seq1  AGCAAAATGAGCAGCTAAAGTGAGGAAAGGAAAATTATAGCAATAACCAA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAAATGAGCAGCTAAAGTGAGGAAAGGAAAATTATAGCAATAACCAA  627

seq1  GAAAATTAGAGTGATTTATATGTATGAAGATGGCATGATAAAAATCTATC  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATTAGAGTGATTTATATGTATGAAGATGGCATGATAAAAATCTATC  677

seq1  ATTGTGTTAATCCAAAACCTAGTTATATATAAAAAAACTTTAAAGAAAGA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTGTTAATCCAAAACCTAGTTATATATAAAAAAACTTTAAAGAAAGA  727

seq1  TGTCATTGAAGAGCTGTACCTCATTCTTCTTGTTTAAAATGTGACTTTTT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCATTGAAGAGCTGTACCTCATTCTTCTTGTTTAAAATGTGACTTTTT  777

seq1  AGCACATCTGTTAGCCATAAAAAGCAAACTCAAGGCAGATATTTTTGAGA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACATCTGTTAGCCATAAAAAGCAAACTCAAGGCAGATATTTTTGAGA  827

seq1  AATCTTTCAAGATCGTAAATGGGCCATTACTCTATTGACTAATATAGTCT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTTTCAAGATCGTAAATGGGCCATTACTCTATTGACTAATATAGTCT  877

seq1  TTCCTTAGGATGGATGGAGTTTATCTTTAAAATGTAATCTTGATCTCTTC  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTAGGATGGATGGAGTTTATCTTTAAAATGTAATCTTGATCTCTTC  927

seq1  AAGCATCCATTTCATTGGTATTAGATTGTGGTACTAGATATTGACAAGGG  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCATCCATTTCATTGGTATTAGATTGTGGTACTAGATATTGACAAGGG  977

seq1  TATCTCAATGAACTTCCAGCCTTCAAAACTTTTTCAATGGATTTAATGAG  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTCAATGAACTTCCAGCCTTCAAAACTTTTTCAATGGATTTAATGAG  1027

seq1  GACTGAATTTAAATAGTCTCATATAACTAATAAATTAATTATCCCATTTA  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGAATTTAAATAGTCTCATATAACTAATAAATTAATTATCCCATTTA  1077

seq1  TGTCTGTAGCACTTATTTTATTTGACTCTTTAGGGCTTTCAAATAGCCAA  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTGTAGCACTTATTTTATTTGACTCTTTAGGGCTTTCAAATAGCCAA  1127

seq1  AATTCTATTCCTTGAACCATTACCTTCACTGAGAATTC  1185
      ||||||||||||||||||||||||||||||||||||||
seq2  AATTCTATTCCTTGAACCATTACCTTCACTGAGAATTC  1165