BAC Information

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BAC

Clone NameB6Ng01-168O03
Chromosome2 (Build37)
Map Location 73,217,549 - 73,218,026
singlet/doubletsinglet
Overlap geneGpr155
Upstream geneB230120H23Rik, Cdca7, LOC383712, LOC635960, LOC100039928, 6430710C18Rik, Sp3, Hspe1-ps5, Gtpbp9, LOC620110, Sp9, 1700023B02Rik, Scrn3
Downstream geneWipf1, Chrna1, Chn1, Atf2, Atp5g3, LOC667729, LOC100040172
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-168O03.bB6Ng01-168O03.g
ACCDH960007DH960008
length8851,146
definitionDH960007|Mus musculus domesticus DNA, BAC clone: B6Ng01-168O03, 5' end.DH960008|Mus musculus domesticus DNA, BAC clone: B6Ng01-168O03, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaacaagctggatgggtcaaagacaccacaaaaagcaataaacat
agtcaataaacttgggcccaaggtgattcacaaagactgaactataaacc
aaagaacatatatgggcttaataaatctagttccctactatacatatgta
tcagatatgcagcttggatctcctaacaattggatttgggagagggctgt
ctctgactccgttgcctgtctttggatgcctttctccaagctggcctgcc
ttgtctggccttattaggagtggactcccttatcactgctatgatttgat
gtgcctgagtggggataaaggaattggtacccataggttgtatccctgtc
tctgacaagaaggggaggagggaatggggaaagggatatgagagtgggac
tgggaggaaaagtgtcttaatagagaaagtaatttatccagtagcttttt
tccacttctgttctttccccccctttatggactcactcatctgtgggtgc
atccataggctagaggaggatgtgtgagcctacaaagagacaggtctctc
actgaacctgaagcctgtgtcagttaggctgactggctagtgagctccgg
ggccttcctctccccaaccccccagcactagggttctaggtaggaaaggc
ctgcctttttttttttcccctcaagctggtaaagaaagggcttttattat
ggggcaaagcaacacacacagaaaagcaagcacacagagtacaaggcctt
ttcacacaacagaggagggcttcagaaagctaacgccctcttgcctggct
gtatgtgggtgctggaagttcaaaacgaggtcctcttgcttttgcgcaat
ctttctcactagctatcaccctaccccctcctgga
gaattccttgatccacttagatttgaccttagtacaaggagataggaatg
gatttgctttcttttacattgtaaccaccagttgtgacagcaccacttgt
tgaaaatgctgtctttcttccactggatggttttagctcccttgtcgaag
atcaagtgaccataggtgtgtgggttcatttctgggtcttcaattctatt
ccattggtctacttgtctgtcgctataccagtaccatgcaggttttatca
caatttctctgtaataaagctttaggtcaagcatggtgattccaccagag
gttcttttatccttgagaagagtttttgttattccagatgaatttgcaaa
ttgctccttctaattcgttgaagaattgagttggaattttgatggggatt
gcattgaatctgtagattgcttttggcaagatagccatttttacaatatt
gatcctgccaatccatgagcatgggagatctttccatcttctgagatctt
ccttaatttctttcttcagagacttgaagttcttatcatacagatctttc
acttccttagttagagtcacaccaagatattttatattatttgtgattat
tgagaagggtgttgtttccctaatttctttctcagcctgtttattctttg
tgtagagaaaggccattgacttgtttgagttaattttatatccagctact
ttatcgaagctgtttatcaggcttaggatttccctggtggaatttttagg
gtcacttatatatactatcatatcatctgcaaaaagtcatattttgactt
cattttttccaatttgtattcccttgatctccttttgttgttgaatttct
ctggccaggatttcagatactatgtttgaataggtagagagaaagtaggc
agccttgtctagttcctgattttagtgggatttcttccagcttctcacca
tttactttgatgtgggctactggtttgctgtaagattggttttatcatgt
tctaggtatgggcctagaattcctgatcttttcgagacttttatcaggat
gggggctgggattatgtcgaaagttttttccacttaattaaggattacgt
gaaggatatccataattaacacaccctgcattccgtgatataaaac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_73217549_73218026
seq2: B6Ng01-168O03.b_455_933

seq1  GAAAAGTGTCTTAATAGAGAAAGTAATTTATCCAGTAGCTTTTTTCCACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGTGTCTTAATAGAGAAAGTAATTTATCCAGTAGCTTTTTTCCACT  50

seq1  TCTGTTCTTTCCCCCCCTTTATGGACTCACTCATCTGTGGGTGCATCCAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  TCTGTTCTTTCCCCCCCTTTATGGACTCACTCATCTGTGGGTGCATCCAT  100

seq1  AGGCTAGAGGAGGATGTGTGAGCCTACAAAGAGACAGGTCTCTCACTGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTAGAGGAGGATGTGTGAGCCTACAAAGAGACAGGTCTCTCACTGAA  150

seq1  CCTGAAGCCTGTGTCAGTTAGGCTGACTGGCTAGTGAGCTCCGGGGCCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAAGCCTGTGTCAGTTAGGCTGACTGGCTAGTGAGCTCCGGGGCCTT  200

seq1  CCTCTCCCCAACCCCCCAGCACTAGGGTTCTAGGTAGGAAAGGCCTGCCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTCCCCAACCCCCCAGCACTAGGGTTCTAGGTAGGAAAGGCCTGCCT  250

seq1  TTTTTTTTTTCCCCTCAAGCTGGTAAAGAAA-GGCTTTTATTAT-GGGCA  298
      ||||||||||||||||||||||||||||||| |||||||||||| |||||
seq2  TTTTTTTTTTCCCCTCAAGCTGGTAAAGAAAGGGCTTTTATTATGGGGCA  300

seq1  AAGCAACACACACAG-AAAGCAAGCACACAGAGTACAAGGCC-TTTCACA  346
      ||||||||||||||| |||||||||||||||||||||||||| |||||||
seq2  AAGCAACACACACAGAAAAGCAAGCACACAGAGTACAAGGCCTTTTCACA  350

seq1  CAGCAGAGGAGGGCTTCAGAAAGCTAACGCCCTCGTGCCTGGCCTGTATG  396
      || ||||||||||||||||||||||||||||||| ||||||| |||||||
seq2  CAACAGAGGAGGGCTTCAGAAAGCTAACGCCCTCTTGCCTGG-CTGTATG  399

seq1  TGGGTGCTGGAAGTTCAAATCGAGGTCCTCTTGCTTTTGCAGCAATCATT  446
      ||||||||||||||||||| |||||||||||||||||||| |||||| ||
seq2  TGGGTGCTGGAAGTTCAAAACGAGGTCCTCTTGCTTTTGC-GCAATCTTT  448

seq1  CTCACTAAGCTACCACCCTACCCCCTCCTGGA  478
      |||||| ||||| |||||||||||||||||||
seq2  CTCACT-AGCTATCACCCTACCCCCTCCTGGA  479