BAC Information

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BAC

Clone NameB6Ng01-169E06
Chromosome4 (Build37)2 (Build37)
Map Location 21,062,911 - 21,062,956124,260,949 - 124,261,926
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneE130310K16Rik
Downstream genePrdm13, Ccnc, 2610029I01Rik, Usp45, 4930528A17Rik, 5730406M06Rik, Coq3, 6230409E13Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-169E06.bB6Ng01-169E06.g
ACCDH960291DH960292
length1,004971
definitionDH960291|Mus musculus domesticus DNA, BAC clone: B6Ng01-169E06, 5' end.DH960292|Mus musculus domesticus DNA, BAC clone: B6Ng01-169E06, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(21,062,911 - 21,062,956)(124,260,949 - 124,261,926)
sequence
gaattcatgaaattcttaggcaaatggatagaactagaaaatgtcatcct
gagtgagtgccacagaccctctgggcccctttgtctgtgtggaacgggtc
tctagtcgcgggtgggcaaagtatcggatgaatgacagacagatgcacac
aggagaggttgtgtaaaatctgaatgtaatttgtcaaatcaagcatcaaa
ctttttatgcagaagacaataaggaagttgggtgacacacttgcaaggta
caaagaggtaactggattcttacataaaacagaggaatgcaaacacagaa
ggtctaacgggaaccatctgggatagaattctttgttaacaactggggtc
aacaagggctccacctaagattcacttaatcttagaagccagggtcaagg
gcttcgtgcccttgccatagttcctattttagtctattgtatagtccacc
ttccccttaggccattgtaaatacatgtgtttgggtgtaactcagctata
gtcttagaagccaggtgtgatgtctttactctcctagggcaagggctttc
acacccaagtcatggttctaactagggagttccattctagctaaccatct
catgaataatgcaatactctaaaaccacagcccaatctacttcctaaacc
attgtaaattcctgtatatgggagtgacttggcttttattctaagtgata
gtgtaataccagaggctattctgaatgtcactgaatagcaacattcttcc
tgaattccaagcccatggtcttactcaaggacgttctaggactgttggaa
cactggctttagctatgtcagaattcaatcttaaaaggcacttataatag
gataatactaaaagagagcacgtggatccatacactagactatcgcagaa
tggaaaattaatgtatgggttagagagaacaccagacttcagagtgagtt
tccgtgaaactcttttgcctcgtgagtagctttcagcctcagctgtcaag
ctga
gaattcaatatctgataaaccaagcagctagtttcttgggcattctgagg
acccttcagtctgtcagctgcagtttgggagcacgatgtgctgtctgaag
agcattcatgctgttctcaagaatgtccaaatggtaacggggatcactca
agagactcatgtgaaagctgcatctaccagggcaggggcttcctccagac
ttttgaacatgtgtgaattcccttgcctacccgttgtgtactttcccatt
tctgtgtttgcttcgagagaggagagggccaagaaagagctgaacttggt
ccaaagggaggtgtttctggcaggtgtgcgggttttaagaaaataaaagc
atgtagcaaccagcagtcccctcagctgagcagagcagcagctgcctgtc
aaggctgcctgctccagcctgctttgggagccttcttggctgctgaaact
atggggactcacgtctgtgtttccagccatttgatctttttaccacttat
ccatcactggggattcccaacttctaaatctggaaagttcgaaagctctt
cacttcacactgggtcccttcaagggtggcaggcagcataagctcaactg
aagcataccattttcctcaaatagccgaggtgaataaatggcacgtgtat
aaagtggaatctggggctaaatgcagtggcggttacagatctggggagga
aacaacttttcacttcagaggtgggaaattctcgattcttccacttctgc
gctaaacttggaatgggctctggagggggggtgcggggggaactggagtc
atttcatcgtcttgcgggtaatgccgcagagctgcagtgaacttaagtct
tgactcattttcatctcttccttgaggcaggcagtggacattaataaatt
ttcagatgttcattttacaaggggttttgaggcctaggacactgtacttg
ctttcggagatttccttatgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_21062911_21062956
seq2: B6Ng01-169E06.b_102_147 (reverse)

seq1  AGAGACCCGTTCCACACAGAAAAAGGGACCAAGAGGGTCTGTGGCA  46
      |||||||||||||||||||| |||||| || |||||||||||||||
seq2  AGAGACCCGTTCCACACAGACAAAGGGGCCCAGAGGGTCTGTGGCA  46

seq1: chr2_124260949_124261926
seq2: B6Ng01-169E06.g_66_1036 (reverse)

seq1  GCATAAAGGAAATCTCAGAAAGCCAGCTACAGTGGCCTAAGGCCTCAAAA  50
      |||| ||||||||||| |||||| || ||||||| ||| |||||||||||
seq2  GCAT-AAGGAAATCTCCGAAAGCAAG-TACAGTGTCCT-AGGCCTCAAAA  47

seq1  ACCCTTGTAAAAATGTACATCTGAAACATTTATTAATGTCCACTGCCTGC  100
       ||||||| |||||| |||||||||| |||||||||||||||||||||||
seq2  CCCCTTGT-AAAATGAACATCTGAAA-ATTTATTAATGTCCACTGCCTGC  95

seq1  CTACAAGGAAGAGATGAAAATGAGTCAAGAC-TCAGCTCACTGCAGCTCC  149
      || |||||||||||||||||||||||||||| | || ||||||||||| |
seq2  CT-CAAGGAAGAGATGAAAATGAGTCAAGACTTAAGTTCACTGCAGCT-C  143

seq1  TGCGGCATTAACCCGCAAGACGATGAAATGACTCCAGTTCCCCCCGCACC  199
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  TGCGGCATT-ACCCGCAAGACGATGAAATGACTCCAGTTCCCCCCGCACC  192

seq1  CCCCCTCCAGAGCCCATTCCAAGTTTAGCGCAGAAGTGGAAGAATCGAGA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCTCCAGAGCCCATTCCAAGTTTAGCGCAGAAGTGGAAGAATCGAGA  242

seq1  ATTTCCCACCTCTGAAGTGAAAAGTTGTTTCCTCCCCAGATCTGTAACCG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCCCACCTCTGAAGTGAAAAGTTGTTTCCTCCCCAGATCTGTAACCG  292

seq1  CCACTGCATTTAGCCCCAGATTCCACTTTATACACGTGCCATTTATTCAC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTGCATTTAGCCCCAGATTCCACTTTATACACGTGCCATTTATTCAC  342

seq1  CTCGGCTATTTGAGGAAAATGGTATGCTTCAGTTGAGCTTATGCTGCCTG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCGGCTATTTGAGGAAAATGGTATGCTTCAGTTGAGCTTATGCTGCCTG  392

seq1  CCACCCTTGAAGGGACCCAGTGTGAAGTGAAGAGCTTTCGAACTTTCCAG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCCTTGAAGGGACCCAGTGTGAAGTGAAGAGCTTTCGAACTTTCCAG  442

seq1  ATTTAGAAGTTGGGAATCCCCAGTGATGGATAAGTGGTAAAAAGATCAAA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAGAAGTTGGGAATCCCCAGTGATGGATAAGTGGTAAAAAGATCAAA  492

seq1  TGGCTGGAAACACAGACGTGAGTCCCCATAGTTTCAGCAGCCAAGAAGGC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTGGAAACACAGACGTGAGTCCCCATAGTTTCAGCAGCCAAGAAGGC  542

seq1  TCCCAAAGCAGGCTGGAGCAGGCAGCCTTGACAGGCAGCTGCTGCTCTGC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAAAGCAGGCTGGAGCAGGCAGCCTTGACAGGCAGCTGCTGCTCTGC  592

seq1  TCAGCTGAGGGGACTGCTGGTTGCTACATGCTTTTATTTTCTTAAAACCC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCTGAGGGGACTGCTGGTTGCTACATGCTTTTATTTTCTTAAAACCC  642

seq1  GCACACCTGCCAGAAACACCTCCCTTTGGACCAAGTTCAGCTCTTTCTTG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACACCTGCCAGAAACACCTCCCTTTGGACCAAGTTCAGCTCTTTCTTG  692

seq1  GCCCTCTCCTCTCTCGAAGCAAACACAGAAATGGGAAAGTACACAACGGG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTCTCCTCTCTCGAAGCAAACACAGAAATGGGAAAGTACACAACGGG  742

seq1  TAGGCAAGGGAATTCACACATGTTCAAAAGTCTGGAGGAAGCCCCTGCCC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGCAAGGGAATTCACACATGTTCAAAAGTCTGGAGGAAGCCCCTGCCC  792

seq1  TGGTAGATGCAGCTTTCACATGAGTCTCTTGAGTGATCCCCGTTACCATT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTAGATGCAGCTTTCACATGAGTCTCTTGAGTGATCCCCGTTACCATT  842

seq1  TGGACATTCTTGAGAACAGCATGAATGCTCTTCAGACAGCACATCGTGCT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACATTCTTGAGAACAGCATGAATGCTCTTCAGACAGCACATCGTGCT  892

seq1  CCCAAACTGCAGCTGACAGACTGAAGGGTCCTCAGAATGCCCAAGAAACT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAAACTGCAGCTGACAGACTGAAGGGTCCTCAGAATGCCCAAGAAACT  942

seq1  AGCTGCTTGGTTTATCAGATATTGAATTC  978
      |||||||||||||||||||||||||||||
seq2  AGCTGCTTGGTTTATCAGATATTGAATTC  971