BAC Information

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BAC

Clone NameB6Ng01-169F04
Chromosome2 (Build37)
Map Location 95,864,228 - 95,865,419
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100042843
Downstream genenone
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-169F04.bB6Ng01-169F04.g
ACCDH960333DH960334
length1,175869
definitionDH960333|Mus musculus domesticus DNA, BAC clone: B6Ng01-169F04, 5' end.DH960334|Mus musculus domesticus DNA, BAC clone: B6Ng01-169F04, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccatacacttctctaaattgtgacaaatattcccattggattctg
catttcaagagaaaaatggcatattctcatatatcagcaattctattgct
gaaactacgaaaacatccatggtggtttgtgcatgagaagagcatccatg
atgcttcctcacataatacctgctaagacctgatagttattaagtattgt
tatattttatcagctttttgccatgtggactgaagtatcatgaaaaatgt
tacatgtattattttaaatcaagtttatacagaaacagcttagttaaata
aaaatggtaaccataatatcatgcacttacagcagttggtactcagtaaa
accttgtttaaattgatctcattagagattttttagcatctctagtatac
aataaaataacagctgtaagctgagatttaagtttctttcttttagatgt
attaacaattgtctataaaaataggagctccaaaaatttggttatgacag
gcatctaactaggagcagtgtttttctcactacactaagatttcatagct
agaggtcctgcagcctgactaatagtttccttcatgttgttggttttaat
gagatgtttgaaatttaagggaaatattcgtggtattttgcctcagagaa
aatagacaaattttctgctcaaatggtgatgatagtatcagccacagatt
agaatcagtcttcactgatagatagatcttgaatgtttgttttcatcgtc
tcttcctgttgtcatctcttctaaatctatttgtcctcaaaaaacatttt
tcccctttccatgataacctatacctattcccaaatctgacatattgatt
gatgtttaaatagagccatgtatgaaaatgacacctgaaaacaaatagat
caatgtaagttatccaagattgtgtcattatctctataaaaatgttacag
cagagatttttatcatgtggttattagttaagattgcatttgatgtattt
tcaaacctcagcttgcacccattattgtatcataatagtacctgaatgaa
actacgaaggagggagaaagaggataatgttacaatacagaaagaatgcc
cacatgcattttccttgcatttctacttaggcaagagatataaacaaaac
tactttgtgaaattgatttgatttg
gaattctttgttcagctctgagccccattttttaatggggttgtttgatt
tttggagtccaccttcttgagttctttatatatattggatattaatcccc
tatctgatttaggataggtaaagatcctttctcaatctgttggtgttttt
ttttttttgtttgttttttttttttttttttttttttttttttttttttt
tttttggcttttgaagggggcttttgccctgcaaaaggttttcaactttt
tgagggcccatttttcactttttgatcttacaacaaaagccattggtgtt
ctatttaggaatttttttcctgtacccctatcttttaaggttttccccac
tttctccccaaaaagtttaaatgaccctgggtttatggggaaatccttaa
tcccctttaaattgacctttgtacacggagaaaggaaaggatgggttccc
cttcttctacctgataaccaccagttgaacccgccccctttgttgaaaat
ggtggcttttttccactggatgggtttagctcccctggcaaaatcaagtg
gccctaggggtgtggggtccactctagggcctccaatctgttccgttgag
ctacttggccggtgctatacccataccatgcccaatttatcccaattgct
ctcgtacaccgctttaggaaggatggagaatccccaggggtttttttccc
tttagagagttctgctatcccacgtttttggtatccagatgaacttgcca
ttgccctttctattcgttggagaattagtggatttgactgggatgaatca
actgcgactgctctcggcgacaagcatttatgatgatccggcatctgaga
ggggacctactctgtgaac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_95864228_95865419
seq2: B6Ng01-169F04.b_46_1220 (reverse)

seq1  CAAA-CAAATCAATTTCAAATTTACAAAGTAGTTTTTGTTTTATATCTCT  49
      |||| ||||||||||||      |||||||||||||   |||||||||||
seq2  CAAATCAAATCAATTTC------ACAAAGTAGTTTT--GTTTATATCTCT  42

seq1  TGCTTAAGTAGAAAATGCAAAGAAAATGCATGTGGGCATTCTTTTCTGTA  99
      ||| ||||||| |||||||| |||||||||||||||||||| ||||||||
seq2  TGCCTAAGTAG-AAATGCAAGGAAAATGCATGTGGGCATTC-TTTCTGTA  90

seq1  TTGTAACATTTATCCTCTTTCTCCCTCTTCTGTAGTTTTCATTCAGGTAC  149
      |||||||| |||||||||||||||||| |  |||| ||||||||||||||
seq2  TTGTAACA-TTATCCTCTTTCTCCCTCCTTCGTAG-TTTCATTCAGGTAC  138

seq1  TATTATTGATACAATAATGGGTTGCAAGCTGAGGTTTGAAAATACATCAA  199
      ||||| ||||||||||||||| ||||||||||||||||||||||||||||
seq2  TATTA-TGATACAATAATGGG-TGCAAGCTGAGGTTTGAAAATACATCAA  186

seq1  ATTGCAATCTTAACTAATAACCACATGATAAAAATCTCTTGCTGTAACAT  249
      | |||||||||||||||||||||||||||||||||||| |||||||||| 
seq2  A-TGCAATCTTAACTAATAACCACATGATAAAAATCTC-TGCTGTAACA-  233

seq1  TTTTTATAGAGATAATGACACAATCTTGGATAACTTACATTGATCTATTT  299
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  TTTTTATAGAGATAATGACACAATCTTGGATAACTTACATTGATCTA-TT  282

seq1  TGTTTTCAGGTGTCATTTTCATACATGGCTCTATTTAAACATCAATCAAT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTCAGGTGTCATTTTCATACATGGCTCTATTTAAACATCAATCAAT  332

seq1  ATGTCAGATTTGGGAATAGGTATAGGTTATCATGGAAAGGGGAAAAATGT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCAGATTTGGGAATAGGTATAGGTTATCATGGAAAGGGGAAAAATGT  382

seq1  TTTTTGAGGACAAATAGATTTAGAAGAGATGACAACAGGAAGAGACGATG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGAGGACAAATAGATTTAGAAGAGATGACAACAGGAAGAGACGATG  432

seq1  AAAACAAACATTCAAGATCTATCTATCAGTGAAGACTGATTCTAATCTGT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACAAACATTCAAGATCTATCTATCAGTGAAGACTGATTCTAATCTGT  482

seq1  GGCTGATACTATCATCACCATTTGAGCAGAAAATTTGTCTATTTTCTCTG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGATACTATCATCACCATTTGAGCAGAAAATTTGTCTATTTTCTCTG  532

seq1  AGGCAAAATACCACGAATATTTCCCTTAAATTTCAAACATCTCATTAAAA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAAAATACCACGAATATTTCCCTTAAATTTCAAACATCTCATTAAAA  582

seq1  CCAACAACATGAAGGAAACTATTAGTCAGGCTGCAGGACCTCTAGCTATG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACAACATGAAGGAAACTATTAGTCAGGCTGCAGGACCTCTAGCTATG  632

seq1  AAATCTTAGTGTAGTGAGAAAAACACTGCTCCTAGTTAGATGCCTGTCAT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCTTAGTGTAGTGAGAAAAACACTGCTCCTAGTTAGATGCCTGTCAT  682

seq1  AACCAAATTTTTGGAGCTCCTATTTTTATAGACAATTGTTAATACATCTA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAAATTTTTGGAGCTCCTATTTTTATAGACAATTGTTAATACATCTA  732

seq1  AAAGAAAGAAACTTAAATCTCAGCTTACAGCTGTTATTTTATTGTATACT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAAGAAACTTAAATCTCAGCTTACAGCTGTTATTTTATTGTATACT  782

seq1  AGAGATGCTAAAAAATCTCTAATGAGATCAATTTAAACAAGGTTTTACTG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGATGCTAAAAAATCTCTAATGAGATCAATTTAAACAAGGTTTTACTG  832

seq1  AGTACCAACTGCTGTAAGTGCATGATATTATGGTTACCATTTTTATTTAA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACCAACTGCTGTAAGTGCATGATATTATGGTTACCATTTTTATTTAA  882

seq1  CTAAGCTGTTTCTGTATAAACTTGATTTAAAATAATACATGTAACATTTT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGCTGTTTCTGTATAAACTTGATTTAAAATAATACATGTAACATTTT  932

seq1  TCATGATACTTCAGTCCACATGGCAAAAAGCTGATAAAATATAACAATAC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGATACTTCAGTCCACATGGCAAAAAGCTGATAAAATATAACAATAC  982

seq1  TTAATAACTATCAGGTCTTAGCAGGTATTATGTGAGGAAGCATCATGGAT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATAACTATCAGGTCTTAGCAGGTATTATGTGAGGAAGCATCATGGAT  1032

seq1  GCTCTTCTCATGCACAAACCACCATGGATGTTTTCGTAGTTTCAGCAATA  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTTCTCATGCACAAACCACCATGGATGTTTTCGTAGTTTCAGCAATA  1082

seq1  GAATTGCTGATATATGAGAATATGCCATTTTTCTCTTGAAATGCAGAATC  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTGCTGATATATGAGAATATGCCATTTTTCTCTTGAAATGCAGAATC  1132

seq1  CAATGGGAATATTTGTCACAATTTAGAGAAGTGTATGGAATTC  1192
      |||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGGGAATATTTGTCACAATTTAGAGAAGTGTATGGAATTC  1175