BAC Information

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BAC

Clone NameB6Ng01-169J18
Chromosome2 (Build37)
Map Location 62,199,649 - 62,388,505
singlet/doubletdoublet
Overlap geneDpp4, Gcg, Fap
Upstream geneTank, Psmd14, Tbr1, LOC100039274, Slc4a10
Downstream geneIfih1, Gca, Kcnh7, EG667257
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-169J18.bB6Ng01-169J18.g
ACCDH960540DH960541
length1,2451,151
definitionDH960540|Mus musculus domesticus DNA, BAC clone: B6Ng01-169J18, 5' end.DH960541|Mus musculus domesticus DNA, BAC clone: B6Ng01-169J18, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(62,199,649 - 62,200,905)(62,387,349 - 62,388,505)
sequence
gaattcatttatgaagcaagctgaggcgtgcagtacactttgtgttctca
ttacagagtgcttaggcacaatcccctctctagacccatgttcacagcct
tatctttttaatacatttccctgtttcccctggatggagttgtgcctagt
agaaatgtgtgaaaactggcatctgtctggttaaatacagagaggaaaaa
acatattttttttcagagagtcgtgaggaagtgtagcgtgtctcttgcca
tggaggaaaccacttttcttgttggcaaacctctctcctctgcccaatca
gtgcctggaaaaaaaggacatgggaatgttgtggtagctcccagcccagc
agagaggggtcttcgtcttcctggactgaagcctcacctctctcacccgg
aagatgggaagtggttacagtctttgcttcacttcgttacccttttaaaa
aagctacgtaccgccgtccagttttcatcttccccataaggtgtcatggt
ggctggagtccctccccctgaccccgtgctttcttccacagtctcagact
tgagtctgaggtgctgtgcatatacatgtgtcaggtggtggtgagcaggg
cagtgggtctctgagggtcaccttgctttcccagataaagtgcatcctca
gagtgcctaccaacatgcgctttcctccagagaggtgagcaatggacatt
attgaattggtactgttcctgatggctgccatccaggctggactgaaacc
ctttttctgcctccaaagcggagaactcaaacaacaggtcaagcaagtat
gttctgcatcttggcagcctttcagctcactggaagctccagttgcctgg
agatcacgctttgctcgtcagttctgctcatgactttggtgtcggacttg
tctcttcgccttcttgggtgtacagtaggaagcacagctaacactgagac
acgacctgactcacgttttcatcagtgacagcacagtgccttagtatagg
acagccacacattaaccggctctgagtagcaggcatgatgtctataaatc
catactcagaccttacctcttccgacccagcctgtggtatccatttcaac
atgtctgctgctctctggggagaaaagacagtggtcagtgtttttagaga
agatggtggaaactttttagctttctcttcttttagatgacgttcctgta
tctaactgcaaattgacaagcctttactgacccgtggtcagcttc
gaattccatccgatgtttttgctgactttttgtattttatttgttaattt
ttatcttcatttttgtgttttttgagagagagagacagacagagagacag
agagaaagagatagaaagttgagtgtagagaagttgaaagaatcttggga
aaaaggtatgatcaaaatatattgtatgaaaaaaaatagtcaaaaaagaa
aaagaaagtctagcacaaagtaaagaagatagttctggtttaaacaagaa
aatttgtagatgacagcttttataatacatcccctttctccatcttttat
agcattagtgaatcatatagccccaaaatggcagctcagatggctttcca
gtcataaagagttggatttgtagactggcattgctcatgccattgcgtag
ctcaactgtactccatggagagaacctaggcagtgttgcagtgtcagcca
aaagtaatcttagaacattaacttgatacagaattgtaaaccaggtaaag
aatatcttctgactcactgcctttactagatccttacatatccattggac
cctggcccgcatgtgcctggtgttcatggactgccctctggctgccagag
ttcccactgcagtgcacctccataatgtccttcttctgaaagcatcaccc
tttctgattaatttttttgcctcgttgctagctatttatttttctgtgtg
acataataaattcagcaaagataaagtgtattctgggtcttcccaggtgt
ccaagtgtgaaggagcaggcaaagtaaaactgatacaaacctgggaccca
aagaacagaggctgtgagctgaaacaaatggggtcttttaaaagtatctt
caaatgggtctcagagtagctactgctttgctgtcccacaaaacagtctt
gatgagactactaagatgatttttcaagcagtcacctttcagcctggcac
ttgcggtctttagtacataaacattgatatgttctcctgaaaatctgcaa
gaagctgcacaatgcaattctcctgctgaagctagcagtgggacgttaac
atcaaagtgagaattttgccaatatgaaatatctgaaatttccccacggt
ggagaacttgcagcttaaaggcacactgccgataatacagattctgtttt
t
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_62199649_62200905
seq2: B6Ng01-169J18.b_47_1291

seq1  GAATTCATTTATGAAGCAAGCTGAGGCGTGCAGTACACTTTGTGTTCTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTTATGAAGCAAGCTGAGGCGTGCAGTACACTTTGTGTTCTCA  50

seq1  TTACAGAGTGCTTAGGCACAATCCCCTCTCTAGACCCATGTTCACAGCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAGAGTGCTTAGGCACAATCCCCTCTCTAGACCCATGTTCACAGCCT  100

seq1  TATCTTTTTAATACATTTCCCTGTTTCCCCTGGATGGAGTTGTGCCTAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTTTTTAATACATTTCCCTGTTTCCCCTGGATGGAGTTGTGCCTAGT  150

seq1  AGAAATGTGTGAAAACTGGCATCTGTCTGGTTAAATACAGAGAGGAAAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATGTGTGAAAACTGGCATCTGTCTGGTTAAATACAGAGAGGAAAAA  200

seq1  ACATATTTTTTTTCAGAGAGTCGTGAGGAAGTGTAGCGTGTCTCTTGCCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATATTTTTTTTCAGAGAGTCGTGAGGAAGTGTAGCGTGTCTCTTGCCA  250

seq1  TGGAGGAAACCACTTTTCTTGTTGGCAAACCTCTCTCCTCTGCCCAATCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGGAAACCACTTTTCTTGTTGGCAAACCTCTCTCCTCTGCCCAATCA  300

seq1  GTGCCTGGAAAAAAAGGACATGGGAATGTTGTGGTAGCTCCCAGCCCAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCCTGGAAAAAAAGGACATGGGAATGTTGTGGTAGCTCCCAGCCCAGC  350

seq1  AGAGAGGGGTCTTCGTCTTCCTGGACTGAAGCCTCACCTCTCTCACCCGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGGGGTCTTCGTCTTCCTGGACTGAAGCCTCACCTCTCTCACCCGG  400

seq1  AAGATGGGAAGTGGTTACAGTCTTTGCTTCACTTCGTTACCCTTTTAAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATGGGAAGTGGTTACAGTCTTTGCTTCACTTCGTTACCCTTTTAAAA  450

seq1  AAGCTACGTACCGCCGTCCAGTTTTCATCTTCCCCATAAGGTGTCATGGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTACGTACCGCCGTCCAGTTTTCATCTTCCCCATAAGGTGTCATGGT  500

seq1  GGCTGGAGTCCCTCCCCCTGACCCCGTGCTTTCTTCCACAGTCTCAGACT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGGAGTCCCTCCCCCTGACCCCGTGCTTTCTTCCACAGTCTCAGACT  550

seq1  TGAGTCTGAGGTGCTGTGCATATACATGTGTCAGGTGGTGGTGAGCAGGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTCTGAGGTGCTGTGCATATACATGTGTCAGGTGGTGGTGAGCAGGG  600

seq1  CAGTGGGTCTCTGAGGGTCACCTTGCTTTCCCAGATAAAGTGCATCCTCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGGGTCTCTGAGGGTCACCTTGCTTTCCCAGATAAAGTGCATCCTCA  650

seq1  GAGTGCCTACCAACATGCGCTTTCCTCCAGAGAGGTGAGCAATGGACATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGCCTACCAACATGCGCTTTCCTCCAGAGAGGTGAGCAATGGACATT  700

seq1  ATTGAATTGGTACTGTTCCTGATGGCTGCCATCCAGGCTGGACTGAAACC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAATTGGTACTGTTCCTGATGGCTGCCATCCAGGCTGGACTGAAACC  750

seq1  CTTTTTCTGCCTCCAAAGCGGAGAACTCAAACAACAGGTCAAGCAAGTAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTCTGCCTCCAAAGCGGAGAACTCAAACAACAGGTCAAGCAAGTAT  800

seq1  GTTCTGCATCTTGGCAGCCTTTCAGCTCACTGGAAGCTCCAGTTGCCTGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTGCATCTTGGCAGCCTTTCAGCTCACTGGAAGCTCCAGTTGCCTGG  850

seq1  AGATCACGCTTTGCTCGTCAGTTCTGCTCATGACTTTGGTGTCGGACTTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCACGCTTTGCTCGTCAGTTCTGCTCATGACTTTGGTGTCGGACTTG  900

seq1  TCTCTTCGCCTTCTTGGGTGTACAGTAGGAAGCACAGCTAACACTGAGAC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTCGCCTTCTTGGGTGTACAGTAGGAAGCACAGCTAACACTGAGAC  950

seq1  ACGACCTGACTCACGTTTCCATCAGTGACAGCACAGTGCCTTAGTATAGG  1000
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  ACGACCTGACTCACGTTTTCATCAGTGACAGCACAGTGCCTTAGTATAGG  1000

seq1  ACAGCCACACATTAACCGGCTCTGAGTAGCAGGCATGATGTCTATAAAAT  1050
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  ACAGCCACACATTAACCGGCTCTGAGTAGCAGGCATGATGTCTAT-AAAT  1049

seq1  CTATAACTCAGGACACTTA-CTCTTCCGACCCAGCCTGTGGTACTCATTT  1099
      | || ||||| ||| |||| |||||||||||||||||||||||  |||||
seq2  CCAT-ACTCA-GAC-CTTACCTCTTCCGACCCAGCCTGTGGTATCCATTT  1096

seq1  CAACATG-CTGCTGCTC-CTGGGGAGAAAAGACAGTG--CAGTGTTTTAA  1145
      ||||||| ||||||||| |||||||||||||||||||  |||||||||  
seq2  CAACATGTCTGCTGCTCTCTGGGGAGAAAAGACAGTGGTCAGTGTTTT-T  1145

seq1  AGAGAAGATGGTGGAGTCCTTTTATGCTTTCTCTTTCTTTTAAAGATGAA  1195
      |||||||||||||||  | ||||| |||||||| |||||||  ||||| |
seq2  AGAGAAGATGGTGGAAACTTTTTA-GCTTTCTC-TTCTTTT--AGATG-A  1190

seq1  CGTGTCCTGTATCTCAAACTGACAATATGACCAAAGCCTTTAACTGACCC  1245
      ||| ||||||||||  ||||| |||  ||||  |||||||| ||||||||
seq2  CGT-TCCTGTATCT--AACTG-CAAATTGAC--AAGCCTTT-ACTGACCC  1233

seq1  TGTGTCAGCTTC  1257
         |||||||||
seq2  GTGGTCAGCTTC  1245

seq1: chr2_62387349_62388505
seq2: B6Ng01-169J18.g_67_1217 (reverse)

seq1  AAAAACAG-ATC-GTATACTGGGCAGTGTGCC-TTAAGCTTGCAAAGTTC  47
      |||||||| ||| ||||  | ||||||||||| |||||| ||| ||||||
seq2  AAAAACAGAATCTGTATTATCGGCAGTGTGCCTTTAAGC-TGC-AAGTTC  48

seq1  TCCACCCGTGGGGAAATTTCAGATATT--CTATTGGCCAAAAATCTCACT  95
      |||| ||||||||||||||||||||||   |||||| ||||| |||||||
seq2  TCCA-CCGTGGGGAAATTTCAGATATTTCATATTGG-CAAAATTCTCACT  96

seq1  TTGATGTTTAACGTCCCACTGCTAGCTTCAGCCAGGAGAATTGCATTGTG  145
      |||||| |||||||||||||||||||||||| ||||||||||||||||||
seq2  TTGATG-TTAACGTCCCACTGCTAGCTTCAG-CAGGAGAATTGCATTGTG  144

seq1  CAGC-TCTTGCAGATTTTCAAGGAGAACATATCAAATGTTTATGTACTAA  194
      |||| |||||||||||||| ||||||||||||| ||||||||||||||||
seq2  CAGCTTCTTGCAGATTTTC-AGGAGAACATATC-AATGTTTATGTACTAA  192

seq1  AGAACCGCAAGTTGCCAGGCTGAAAGGTTGACTGCTTG-AAAATCATCTT  243
      || |||||||| ||||||||||||||| |||||||||| |||||||||||
seq2  AG-ACCGCAAG-TGCCAGGCTGAAAGG-TGACTGCTTGAAAAATCATCTT  239

seq1  AGTAGTCTCATCAAGACTGTTTTTGTGGGACAGCAAAGCAGTAGCTACTC  293
      ||||||||||||||||||| ||||||||||||||||||||||||||||| 
seq2  AGTAGTCTCATCAAGACTG-TTTTGTGGGACAGCAAAGCAGTAGCTACT-  287

seq1  CTGAGACCCATTTGAAGATACTTTTAAAAGACCCCATTTGTTTCAGCTCA  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGACCCATTTGAAGATACTTTTAAAAGACCCCATTTGTTTCAGCTCA  337

seq1  CAGCCTCTGTTCTTTGGGTCCCAGGTTTGTATCAGTTTTACTTTGCCTGC  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCTCTGTTCTTTGGGTCCCAGGTTTGTATCAGTTTTACTTTGCCTGC  387

seq1  TCCTTCACACTTGGACACCTGGGAAGACCCAGAATACACTTTATCTTTGC  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTCACACTTGGACACCTGGGAAGACCCAGAATACACTTTATCTTTGC  437

seq1  TGAATTTATTATGTCACACAGAAAAATAAATAGCTAGCAACGAGGCAAAA  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATTTATTATGTCACACAGAAAAATAAATAGCTAGCAACGAGGCAAAA  487

seq1  AAATTAATCAGAAAGGGTGATGCTTTCAGAAGAAGGACATTATGGAGGTG  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTAATCAGAAAGGGTGATGCTTTCAGAAGAAGGACATTATGGAGGTG  537

seq1  CACTGCAGTGGGAACTCTGGCAGCCAGAGGGCAGTCCATGAACACCAGGC  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGCAGTGGGAACTCTGGCAGCCAGAGGGCAGTCCATGAACACCAGGC  587

seq1  ACATGCGGGCCAGGGTCCAATGGATATGTAAGGATCTAGTAAAGGCAGTG  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGCGGGCCAGGGTCCAATGGATATGTAAGGATCTAGTAAAGGCAGTG  637

seq1  AGTCAGAAGATATTCTTTACCTGGTTTACAATTCTGTATCAAGTTAATGT  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAGAAGATATTCTTTACCTGGTTTACAATTCTGTATCAAGTTAATGT  687

seq1  TCTAAGATTACTTTTGGCTGACACTGCAACACTGCCTAGGTTCTCTCCAT  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAGATTACTTTTGGCTGACACTGCAACACTGCCTAGGTTCTCTCCAT  737

seq1  GGAGTACAGTTGAGCTACGCAATGGCATGAGCAATGCCAGTCTACAAATC  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTACAGTTGAGCTACGCAATGGCATGAGCAATGCCAGTCTACAAATC  787

seq1  CAACTCTTTATGACTGGAAAGCCATCTGAGCTGCCATTTTGGGGCTATAT  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTCTTTATGACTGGAAAGCCATCTGAGCTGCCATTTTGGGGCTATAT  837

seq1  GATTCACTAATGCTATAAAAGATGGAGAAAGGGGATGTATTATAAAAGCT  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCACTAATGCTATAAAAGATGGAGAAAGGGGATGTATTATAAAAGCT  887

seq1  GTCATCTACAAATTTTCTTGTTTAAACCAGAACTATCTTCTTTACTTTGT  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATCTACAAATTTTCTTGTTTAAACCAGAACTATCTTCTTTACTTTGT  937

seq1  GCTAGACTTTCTTTTTCTTTTTTGACTATTTTTTTTCATACAATATATTT  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAGACTTTCTTTTTCTTTTTTGACTATTTTTTTTCATACAATATATTT  987

seq1  TGATCATACCTTTTTCCCAAGATTCTTTCAACTTCTCTACACTCAACTTT  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCATACCTTTTTCCCAAGATTCTTTCAACTTCTCTACACTCAACTTT  1037

seq1  CTATCTCTTTCTCTCTGTCTCTCTGTCTGTCTCTCTCTCTCAAAAAACAC  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCTCTTTCTCTCTGTCTCTCTGTCTGTCTCTCTCTCTCAAAAAACAC  1087

seq1  AAAAATGAAGATAAAAATTAACAAATAAAATACAAAAAGTCAGCAAAAAC  1143
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATGAAGATAAAAATTAACAAATAAAATACAAAAAGTCAGCAAAAAC  1137

seq1  ATCGGATGGAATTC  1157
      ||||||||||||||
seq2  ATCGGATGGAATTC  1151