BAC Information

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BAC

Clone NameB6Ng01-169O07
Chromosome2 (Build37)
Map Location 67,787,790 - 67,788,959
singlet/doubletsinglet
Overlap genenone
Upstream geneGm1322, Cmya3, LOC621171
Downstream geneLOC227995, B3galt1, Stk39, LOC100039683, Gm1323, 4933409G03Rik, 4932414N04Rik, LOC667443, Lass6
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-169O07.bB6Ng01-169O07.g
ACCDH960747DH960748
length1,1501,189
definitionDH960747|Mus musculus domesticus DNA, BAC clone: B6Ng01-169O07, 5' end.DH960748|Mus musculus domesticus DNA, BAC clone: B6Ng01-169O07, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcacaatgtaagcatgcccagggtcctggggcaatcccctgtagag
agcatgggttagcgcttgcctaatttcagtcacttcaaggggccatttaa
aaaagcactagccttacaattgaatagcaacttgaaaatcagtgggagat
taaaacaaaaagagagagccaatgttacaacagatgttaatgagcacaga
agacacttctaaaggaaaaaaattaaagagccaggaagtaaacacctgac
atataagacccagtgacttgtatgtttcatgtattcaagccatttttgat
tggtgaaaaggtgtttgtccattgtggctattctagcagactacctgggg
ctgagcactttaatctagaacagggacttatttagcttaaaattttatta
gctaataatctaaacagtgtggcattggctgctgaaatgccttggaagct
gtactgcaacaggacggagggcatcgtggcaggaaaatatgcaccaagga
gagaccacggcaagatcacagagtgagacaggcagccagagagaaacgag
attcctcaagaacacatatgattccttctaaggtctaaggtatgcctcca
atgacttaaaaacaccccacgacccttcccctttaaaactcccaccactt
cttaatatcaccaggctagagaccaagctcccagcacatgatatattgag
ggatagttaattcacatcaataccacacagtggtattgtctctttttgtt
tgggcaaggttcaatgaacagagagtcaagggaaacttagctagctcaac
ctcatgacaagtgctgaataaagacaaggactgtacactacaggactaca
ggacgctcagggtacagtttcttttgtgggtatagagaagaaaagggaat
tttccttttcaaagctaaagacacctagcaagttggaaacatttgcttgg
ctagctgacagtataaacagtgctcaaaatgctcatctcttcatagcatt
tgctattgtagattgttctctccttaaaagtccttttcccatccactata
aaacttcgcaagtccaattcctctccagccattagatggtgttctacccc
ccactccctaatgcaatctttacttcctcccaaggtgggatggctactct

gaattctttgtttggctctgaaccccatttttaataggttatttgaattt
ctgaggtcctgcttcttgagctctttgtatatattggatattagtcccct
atcagatttaggattggtaaaaattctttcccaatctgttggtggccttt
ttgtcttattgacagtgtattttgccttatagaagctttgcaattttatg
aggtcccttttgtcaatcctcgatcttacagcacaagccattgctgttct
gtttaggaatttttctaaattctaaaattctatggttttagctcctttgt
caaagatcaagttaccatagatgtgtggactcatagcttgtactattctc
aaagagcctctggtagaatcaccatgcctgacattaagctgtactacaaa
gcaattgtgataaaaactgcatggtacttgcacagtgacagacaggtaga
tcaatggaatagaattgaagacccagaaatgagtccaaaggagctaaaaa
cattcagtggaaaaaagacagcattttcaacaaatggtgctggcacaact
ggcggttatcatgtattagaatgcgaattgatccatttttatctccttgt
acatagctcatatctttgagaatagtttttgctatcctaggttttttgtt
attccagatgaatttgtaaattgccctttctatctcagtgaagaattggg
ttggaattttgatagggattgcagtgaatctgtacattgctttcagcagg
atagccatgctccactactggtgggattgcaagcttgtacgagcactctg
gaagtcagactggaggttcctcagaaaattggacataatactactgaaag
atccagcaatacctcttctggcatatacccagaagaagttccaactggta
atagacacatgcttcactatgttcatagcagccttatttatagtagccag
agctgaagacccagatgtccctcacagagatgatacagaaaatgtggtac
atttaccacatgagtactactcagctataaaacatgatttatgaaatttt
ggacaatgatgttctgagatatcatctatgaggtacaatccaaagagcat
agatatgcctcctgtaatggattagtcgaaactgatcgatatgctagcct
gaatcaagatgagaaccatggggtggacatcaactgtct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_67787790_67788959
seq2: B6Ng01-169O07.b_45_1194

seq1  GAATTCACAATGTAAGCATGCCCAGGGTCCTGGGGCAATCCCCTGTAGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACAATGTAAGCATGCCCAGGGTCCTGGGGCAATCCCCTGTAGAG  50

seq1  AGCATGGGTTAGCGCTTGCCTAATTTCAGTCACTTCAAGGGGCCATTTAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATGGGTTAGCGCTTGCCTAATTTCAGTCACTTCAAGGGGCCATTTAA  100

seq1  AAAAGCACTAGCCTTACAATTGAATAGCAACTTGAAAATCAGTGGGAGAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGCACTAGCCTTACAATTGAATAGCAACTTGAAAATCAGTGGGAGAT  150

seq1  TAAAACAAAAAGAGAGAGCCAATGTTACAACAGATGTTAATGAGCACAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAACAAAAAGAGAGAGCCAATGTTACAACAGATGTTAATGAGCACAGA  200

seq1  AGACACTTCTAAAGGAAAAAAATTAAAGAGCCAGGAAGTAAACACCTGAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACACTTCTAAAGGAAAAAAATTAAAGAGCCAGGAAGTAAACACCTGAC  250

seq1  ATATAAGACCCAGTGACTTGTATGTTTCATGTATTCAAGCCATTTTTGAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAAGACCCAGTGACTTGTATGTTTCATGTATTCAAGCCATTTTTGAT  300

seq1  TGGTGAAAAGGTGTTTGTCCATTGTGGCTATTCTAGCAGACTACCTGGGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGAAAAGGTGTTTGTCCATTGTGGCTATTCTAGCAGACTACCTGGGG  350

seq1  CTGAGCACTTTAATCTAGAACAGGGACTTATTTAGCTTAAAATTTTATTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGCACTTTAATCTAGAACAGGGACTTATTTAGCTTAAAATTTTATTA  400

seq1  GCTAATAATCTAAACAGTGTGGCATTGGCTGCTGAAATGCCTTGGAAGCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAATAATCTAAACAGTGTGGCATTGGCTGCTGAAATGCCTTGGAAGCT  450

seq1  GTACTGCAACAGGACGGAGGGCATCGTGGCAGGAAAATATGCACCAAGGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTGCAACAGGACGGAGGGCATCGTGGCAGGAAAATATGCACCAAGGA  500

seq1  GAGACCACGGCAAGATCACAGAGTGAGACAGGCAGCCAGAGAGAAACGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACCACGGCAAGATCACAGAGTGAGACAGGCAGCCAGAGAGAAACGAG  550

seq1  ATTCCTCAAGAACACATATGATTCCTTCTAAGGTCTAAGGTATGCCTCCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCTCAAGAACACATATGATTCCTTCTAAGGTCTAAGGTATGCCTCCA  600

seq1  ATGACTTAAAAACACCCCACGACCCTTCCCCTTTAAAACTCCCACCACTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACTTAAAAACACCCCACGACCCTTCCCCTTTAAAACTCCCACCACTT  650

seq1  CTTAATATCACCAGGCTAGAGACCAAGCTCCCAGCACATGATATATTGAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAATATCACCAGGCTAGAGACCAAGCTCCCAGCACATGATATATTGAG  700

seq1  GGATAGTTAATTCACATCAATACCACACAGTGGTATTGTCTCTTTTTGTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATAGTTAATTCACATCAATACCACACAGTGGTATTGTCTCTTTTTGTT  750

seq1  TGGGCAAGGTTCAATGAACAGAGAGTCAAGGGAAACTTAGCTAGCTCAAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCAAGGTTCAATGAACAGAGAGTCAAGGGAAACTTAGCTAGCTCAAC  800

seq1  CTCATGACAAGTGCTGAATAAAGACAAGGACTGTACACTACAGGACTACA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATGACAAGTGCTGAATAAAGACAAGGACTGTACACTACAGGACTACA  850

seq1  GGACGCTCAGGGTACAGTTTCTTTTGTGGGTATAGAGAAGAAAAGGGAAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  GGACGCTCAGGGTACAGTTTCTTTTGTGGGTATAGAGAAGAAAAGGG-AA  899

seq1  TTTTCCTTTTCAAAAGCTAAAGACACCTAGCAAGTTGGAAACATTTGCTT  950
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCTTTTC-AAAGCTAAAGACACCTAGCAAGTTGGAAACATTTGCTT  948

seq1  GGCTAGCTGACAGTATAAACAGTGCTCAAAATGCTCATCTCTTCATAGCA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTAGCTGACAGTATAAACAGTGCTCAAAATGCTCATCTCTTCATAGCA  998

seq1  TCTGCTATTGTAGATTGTTCTCTACTTAAAATGTCCTTTTCCTCATCCAC  1050
      | ||||||||||||||||||||| ||||||| |||||||||| |||||||
seq2  TTTGCTATTGTAGATTGTTCTCTCCTTAAAA-GTCCTTTTCC-CATCCAC  1046

seq1  TATAACACTTCGCAAGTCCAATTCCTCTCCAGCCCATTCAGATTTGTGTG  1100
      ||||| |||||||||||||||||||||||||| ||||| ||||    |||
seq2  TATAAAACTTCGCAAGTCCAATTCCTCTCCAG-CCATT-AGAT---GGTG  1091

seq1  TTTCTTTTACTCTCTCAACTTCCCCTAAATGGCAATTCTTTACTTCTCTC  1150
       ||||      | | | |||  ||||||   |||| ||||||||||   |
seq2  -TTCT-----ACCCCCCACT--CCCTAA--TGCAA-TCTTTACTTCCTCC  1130

seq1  AAATGTTGGATGGCTACTCT  1170
       || || |||||||||||||
seq2  CAAGGTGGGATGGCTACTCT  1150