BAC Information

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BAC

Clone NameB6Ng01-170B03
Chromosome2 (Build37)
Map Location 88,399,125 - 88,400,072
singlet/doubletsinglet
Overlap geneOlfr1188
Upstream geneLOC668445, LOC668447, Olfr1129, Olfr1130, Olfr1131, Olfr1132, LOC100042076, Olfr1133, Olfr1134, Olfr1135, Olfr1136, Olfr1137, Olfr1138, GA_x5J8B7W3Y5M-1033291-1033773, Olfr1140, Olfr1141, Olfr152, Olfr1142-ps1, Olfr1143, GA_x5J8B7W3Y5M-1094074-1093275, Olfr1145, Olfr1146-ps1, Olfr1147-ps1, Olfr1148, Olfr1149-ps1, Olfr1150-ps1, Olfr1151, Olfr1152, Olfr1153, Olfr1154, Olfr1155, Olfr1156, Olfr1157, Olfr74, Olfr1158, Olfr1159-ps1, Olfr1160, Olfr1161, Olfr73, Olfr1162, Olfr1163, Olfr1164, Olfr1165, Olfr1166, Olfr1167, Olfr1168, Olfr1169-ps1, Olfr1170, Olfr1171-ps1, Olfr1172-ps1, Olfr1173, Olfr1174, Olfr1175, Olfr1176, Olfr1177, Olfr1178, Olfr1179, Olfr1180, Olfr1181, Olfr1182, Olfr1183, Olfr1184, Olfr1185-ps1, Olfr1186, Olfr1187-ps1
Downstream geneLOC668528, Olfr1189, GA_x5J8B7W4NS2-37772-38277, Olfr475-ps1, Olfr526-ps1, Olfr1192-ps1, Olfr1193, Olfr1194-ps1, Olfr1195, Olfr1196, Olfr1197, Olfr1198, Olfr1199, Olfr1200, Olfr1201, Olfr1202, Olfr1203, Olfr1204, Olfr1206, Olfr1208, Olfr1209, Olfr1211, Olfr1212, Olfr1213, Olfr1214, Olfr1215, Olfr1216, Olfr1217, Olfr1218, Olfr1219, Olfr1220, Olfr1221, Olfr1222, Olfr1223, Olfr1224-ps1, Olfr1225, LOC435676, Olfr1226, LOC100042983, GA_x5J8B7TTH1T-1160-261, Olfr1227-ps1, Olfr1228, Olfr1229, Olfr1230, Olfr1231, Olfr1232, Olfr1233, Olfr1234, Olfr1235-ps1, GA_x5J8B7W62NC-668773-668438, Olfr1237-ps1, Olfr1238, Olfr1239, Olfr1240, Olfr1241, Olfr1242, Olfr1243, Olfr1244-ps1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-170B03.g
ACCDH960878
length1,127
definitionDH960878|Mus musculus domesticus DNA, BAC clone: B6Ng01-170B03, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccttcttaatgaagtatgatactgggagagtcttgggggatatct
aagaacacatgagtctataccaagagatagattccccatgaaatggagaa
ggacaaagaataactctggagagacttgactgaaggggctactgagacct
cgggttcaaatcgaaatgtggagtcccctatggacggagggagggaggga
ggttactagagataactaataaatatattaaaatgacctcataaattaac
tattaaacaaatattaagattgtatttcatctaagtaactcttagcatat
gcatgtgcacacacatacacacacacacacatacacacatatacacacaa
taaagcttacaaaccatctataatgtggtataatttctttaggaaattca
ttttgtattgattgataagtgtgaataccaagaataagctggaattaaac
tgagagattcagaacagttctttaatggtatattttattagaatttggct
tcaaataaaaatcctcataaaatggtaaggttaattctaatttcttttta
tgaaatagatggcataaagcatttccctttggtatggcatgaaacaaaat
aattcatattattaaaatgttttgttcttcactgaaaaccataaataagt
ttcctcatgaagtttgctagtaatatctttttctaggctaacccagcact
cctgagatgcccaacagcattcaactgagagaaaaagagaatgaacgtga
ctgaattcatcctcatggggactaacacagaatccccagcttcagagaat
tctattttttgtgttactcatcacctacatcattactgtcacaggaaacc
tgctcatagtggggaccatagtctgtagccagtctttgaactccccaatg
tactttttcttgactttttatctctgatagatgcatgtattcctctgcac
aatccctaagatgctggtagattgctctcagaacaaaaccatctcatcat
ggctgcatatgcaacttttgtgacattctaggagcttcaagattgtcctt
ctgtggtatggcctatgacgtatgtgcatctgcgaccctgccctatgcct
cagagagacaccatatgtgcggtcttc
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_88399125_88400072
seq2: B6Ng01-170B03.g_268_1192

seq1  TTACTAGAGATAACTAATAAATATATTAAAATGACCTCATAAATTAACTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTAGAGATAACTAATAAATATATTAAAATGACCTCATAAATTAACTA  50

seq1  TTAAACAAATATTAAGATTGTATTTCATCTAAGTAACTCTTAGCATATGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAACAAATATTAAGATTGTATTTCATCTAAGTAACTCTTAGCATATGC  100

seq1  ATGTGCACACACATACACACACACACACATACACACATATACACACAATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGCACACACATACACACACACACACATACACACATATACACACAATA  150

seq1  AAGCTTACAAACCATCTATAATGTGGTATAATTTCTTTAGGAAATTCATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTTACAAACCATCTATAATGTGGTATAATTTCTTTAGGAAATTCATT  200

seq1  TTGTATTGATTGATAAGTGTGAATACCAAGAATAAGCTGGAATTAAACTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTATTGATTGATAAGTGTGAATACCAAGAATAAGCTGGAATTAAACTG  250

seq1  AGAGATTCAGAACAGTTCTTTAATGGTATATTTTATTAGAATTTGGCTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGATTCAGAACAGTTCTTTAATGGTATATTTTATTAGAATTTGGCTTC  300

seq1  AAATAAAAATCCTCATAAAATGGTAAGGTTAATTCTAATTTCTTTTTATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAAAATCCTCATAAAATGGTAAGGTTAATTCTAATTTCTTTTTATG  350

seq1  AAATAGATGGCATAAAGCATTTCCCTTTGGTATGGCATGAAACAAAATAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAGATGGCATAAAGCATTTCCCTTTGGTATGGCATGAAACAAAATAA  400

seq1  TTCATATTATTAAAATGTTTTGTTCTTCACTGAAAACCATAAATAAG-TT  449
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  TTCATATTATTAAAATGTTTTGTTCTTCACTGAAAACCATAAATAAGTTT  450

seq1  CCTCATGAAGTTTGCTAGTAATATCTTTTTCTAGGCTAACCCAGCACTCC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCATGAAGTTTGCTAGTAATATCTTTTTCTAGGCTAACCCAGCACTCC  500

seq1  TGAGATGCCCAACAGCATTCAACTGAGAG-AAAAGAGAATGAACGTGACT  548
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  TGAGATGCCCAACAGCATTCAACTGAGAGAAAAAGAGAATGAACGTGACT  550

seq1  GAATTCATCCTCAT-GGGACTAACACAGAATCCCCAGCTTCAGAGAATTC  597
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  GAATTCATCCTCATGGGGACTAACACAGAATCCCCAGCTTCAGAGAATTC  600

seq1  TATTTTTTGTGTTACTCATCACCTACATCATTACTGTCACAGGAAACCTG  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTTTGTGTTACTCATCACCTACATCATTACTGTCACAGGAAACCTG  650

seq1  CTCATAGTGGGGACCATAGTCTGTAGCCAGTCTTTGAACTCCCCAATGTA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATAGTGGGGACCATAGTCTGTAGCCAGTCTTTGAACTCCCCAATGTA  700

seq1  CTTTTTCTTGACTTTTTTATCTCTGATAGATGCATGTTATTCCTCTTGCA  747
      |||||||||||| ||||||||||||||||||||||| |||||||| ||||
seq2  CTTTTTCTTGAC-TTTTTATCTCTGATAGATGCATG-TATTCCTC-TGCA  747

seq1  CAATCCCTAAGATGCTGGTAGATTTGCTCTCAGAAACAAAAACCATCTCA  797
      |||||||||||||||||||||| ||||||||||||   ||||||||||||
seq2  CAATCCCTAAGATGCTGGTAGA-TTGCTCTCAGAA--CAAAACCATCTCA  794

seq1  TTCAATGGCTGCATATTGCAACTTTTTGTTGAACATTTCTTAGGAGCTTC  847
      |   ||||||||||| |||||| ||||||   |||||   ||||||||||
seq2  T--CATGGCTGCATA-TGCAAC-TTTTGT--GACATT--CTAGGAGCTTC  836

seq1  AGAGATTGTCCTTCTTGTGGTTATGGCCTATGACCGCTATGTGGCCATCT  897
      | |||||||||||| ||||| |||||||||||||   ||||||  |||||
seq2  A-AGATTGTCCTTC-TGTGG-TATGGCCTATGAC--GTATGTG--CATCT  879

seq1  GCAGACCTCTGCACTATGCCTCCAGGATGAACCACCATATGTGCTGTCTT  947
      || |||| |||| |||||||| |||   ||  |||||||||||| |||||
seq2  GC-GACC-CTGCCCTATGCCT-CAG--AGAGACACCATATGTGCGGTCTT  924

seq1  C  948
      |
seq2  C  925