BAC Information

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BAC

Clone NameB6Ng01-170I05
Chromosome2 (Build37)11 (Build37)
Map Location 142,777,095 - 142,777,21614,478,598 - 14,479,431
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC668913, LOC668914, Kif16b
Downstream geneSnrpb2, Otor, LOC668915, LOC668916, Pcsk2, Bfsp1, LOC100043799, LOC100043534, Dstn, Rrbp1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-170I05.bB6Ng01-170I05.g
ACCDH961207DH961208
length137828
definitionDH961207|Mus musculus domesticus DNA, BAC clone: B6Ng01-170I05, 5' end.DH961208|Mus musculus domesticus DNA, BAC clone: B6Ng01-170I05, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(142,777,095 - 142,777,216)(14,478,598 - 14,479,431)
sequence
tttctttagccctgtaccccaattttaatggggttatttgattttctgga
gtcaatcttcttgagttctttatatatattggatattattcccctatctg
acttaggattggtaaagatcctttcccaatatgttgg
gaattcaactttaaaaactttgatactgagatatttaagtgtttctgtag
tgggaggcttataatgttgtatcagtgtttagatactgttcctgcatgaa
tatgtcctcactactttcttttagaggtatataccaaagatatgaccttc
cattgttagtgttaaatttgtcattgatgtgttgtagtttttgtagaatt
ctccattaaatatattctaccccatttgttatagactatatcagtatcct
agttatgctggtctgtcatattcttctacatttataagtgatattatttg
ccatatttaaaaaaataagatgatttaatcactctcccactctagtgtcc
atcttgtgattatataactttaaatattttctttagaattgcacattaag
aatatattttgttctaagagcattggaacaaaatcatagaaaatgaacta
ggggaaggactgaaggatctgaagggggtagctaccccttaggaagactg
gcaatatcaactagaccacccagagctccaaggtactaagccatcaaaaa
agaacataaatgagttcgtccatggtccacaatgtacatgtagcaaagga
ctgccttgtctgacctcagttggatgttatatgcttagtcctgtggagga
ttgatgccacagagaaggcagatgctagaggagagaggtggaagtgggtt
ggtgggtgggacagcaaccttttagaggcaaaatgaagtgaagagaggat
atgggttatgaaagagggacatgaaggagggcagcatttgaactgcaaat
aataaattattaataaaaacaagtattc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_142777095_142777216
seq2: B6Ng01-170I05.b_69_189 (reverse)

seq1  CCAACAGATTGGGAAAGGATCTTTACCTATCCTAAATCAGATAGGGGACT  50
      |||||| |||||||||||||||||||| ||||||| |||||||||||| |
seq2  CCAACATATTGGGAAAGGATCTTTACCAATCCTAAGTCAGATAGGGGAAT  50

seq1  AATATCCAACATATATAAAGAACTCAAGAAGGTGGACTTCAGAAAATCAA  100
      ||||||||| ||||||||||||||||||||| | |||| |||||||||||
seq2  AATATCCAATATATATAAAGAACTCAAGAAGATTGACTCCAGAAAATCAA  100

seq1  ATAACCCCATTAAAAAATGGGG  122
      ||||||||||| |||| |||||
seq2  ATAACCCCATT-AAAATTGGGG  121

seq1: chr11_14478598_14479431
seq2: B6Ng01-170I05.g_68_895 (reverse)

seq1  GAATACTTTGTTTTTTATTAATTATTTTATTTATTTGCAGTTCAAATGCT  50
      ||||||||   ||||||||||| ||||   ||||||||||||||||||||
seq2  GAATACTT--GTTTTTATTAATAATTT--ATTATTTGCAGTTCAAATGCT  46

seq1  GCCCTCCTTCATGGTCCCTCTTTCATGAACCCCTATCCTCTCTTCACTTC  100
      |||||||||||| ||||||||||||| ||||| |||||||||||||||||
seq2  GCCCTCCTTCAT-GTCCCTCTTTCAT-AACCCATATCCTCTCTTCACTTC  94

seq1  ATTTTGCCTCTAAGAGGTTGCTGTCCCACCCACCAACCCACTTCCACCTC  150
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  ATTTTGCCTCTAAAAGGTTGCTGTCCCACCCACCAACCCACTTCCACCTC  144

seq1  TCTCCTCTAGCATCTGCCTTCTCTGTGGCATCAATCCTCCACAGGACTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCTCTAGCATCTGCCTTCTCTGTGGCATCAATCCTCCACAGGACTAA  194

seq1  GCATATAACATCCAACTGAGGTCAGACAAGGCAGTCCTTTGCTACATGTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATATAACATCCAACTGAGGTCAGACAAGGCAGTCCTTTGCTACATGTA  244

seq1  CATTGTGGACCATGGACGAACTCATTTATGTTCTTTTTTGATGGCTTAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGTGGACCATGGACGAACTCATTTATGTTCTTTTTTGATGGCTTAGT  294

seq1  ACCTTGGAGCTCTGGGTGGTCTAGTTGATATTGCCAGTCTTCCTAAGGGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTGGAGCTCTGGGTGGTCTAGTTGATATTGCCAGTCTTCCTAAGGGG  344

seq1  TAGCTACCCCCTTCAGATCCTTCAGTCCTTCCCCTAGTTCATTTTCTATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTACCCCCTTCAGATCCTTCAGTCCTTCCCCTAGTTCATTTTCTATG  394

seq1  ATTTTGTTCCAATGCTCTTAGAACAAAATATATTCTTAATGTGCAATTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGTTCCAATGCTCTTAGAACAAAATATATTCTTAATGTGCAATTCT  444

seq1  AAAGAAAATATTTAAAGTTATATAATCACAAGATGGACACTAGAGTGGGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAAATATTTAAAGTTATATAATCACAAGATGGACACTAGAGTGGGA  494

seq1  GAGTGATTAAATCATCTTATTTTTTTAAATATGGCAAATAATATCACTTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGATTAAATCATCTTATTTTTTTAAATATGGCAAATAATATCACTTA  544

seq1  TAAATGTAGAAGAATATGACAGACCAGCATAACTAGGATACTGATATAGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATGTAGAAGAATATGACAGACCAGCATAACTAGGATACTGATATAGT  594

seq1  CTATAACAAATGGGGTAGAATATATTTAATGGAGAATTCTACAAAAACTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATAACAAATGGGGTAGAATATATTTAATGGAGAATTCTACAAAAACTA  644

seq1  CAACACATCAATGACAAATTTAACACTAACAATGGAAGGTCATATCTTTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACACATCAATGACAAATTTAACACTAACAATGGAAGGTCATATCTTTG  694

seq1  GTATATACCTCTAAAAGAAAGTAGTGAGGACATATTCATGCAGGAACAGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATATACCTCTAAAAGAAAGTAGTGAGGACATATTCATGCAGGAACAGT  744

seq1  ATCTAAACACTGATACAACATTATAAGCCTCCCACTACAGAAACACTTAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAAACACTGATACAACATTATAAGCCTCCCACTACAGAAACACTTAA  794

seq1  ATATCTCAGTATCAAAGTTTTTAAAGTTGAATTC  834
      ||||||||||||||||||||||||||||||||||
seq2  ATATCTCAGTATCAAAGTTTTTAAAGTTGAATTC  828