BAC Information

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BAC

Clone NameB6Ng01-170K14
Chromosome2 (Build37)
Map Location 43,077,855 - 43,235,369
singlet/doubletdoublet
Overlap genenone
Upstream geneLrp1b, LOC100041228
Downstream geneLOC100041245, Kynu, Arhgap15
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-170K14.bB6Ng01-170K14.g
ACCDH961317DH961318
length1,0671,047
definitionDH961317|Mus musculus domesticus DNA, BAC clone: B6Ng01-170K14, 5' end.DH961318|Mus musculus domesticus DNA, BAC clone: B6Ng01-170K14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(43,234,307 - 43,235,369)(43,077,855 - 43,078,896)
sequence
gaattctccaataagtgtgagagttggttttctattcctattctacattt
atcaataaaataattctaaaacatagagaaaaattacaataatactccct
ctaccaggtgcaagtcctttggtctatcaataagggtggtaaaaacttta
ccttccatttgttgagtggaaaatgagtgaaggtatatgccatacatccc
tgttgcatggagagggcagcacttatgccttcccccatcaacccctttgc
gttctctgtcttttatcagttcttcctaggaacataaaagtgaacttagt
agacccctttaaacacatggtctgtgatgtgaagtatcccttacatttag
tctgtaagaaatttgacatctccacacacattttctgtcaccacttagcc
agatgtgatgtagtcatgtggtgattgtatatttcagatgtgcttctata
ctaagttgagtcaaaacatctcctgtgcactcatactatgttcacatgtt
ctctttctcgcctgcatattaatgaggaagagaagtcaatctcttgcttt
tcgcccaagagctttactgtagttcttgatcccataatgcctgagtataa
aatagctgaaagtgtacattaacagaacaaaaaaattcccaagctacagc
agcagtatttgggaagaagcttccccacagctggataccagttatttaaa
tcacagaaccttgtatagtttcaaacagtcccatggttatacacacctat
tgattcaaaaccttctaaacatttctagctggatttgggaggggggctat
aatagatacaaggaaaaggtacatgtgctagcagtactttcattatgtag
ataggaaataagaaatcaaaacatattggttctaggatgtcacttctctg
acacagcatttatgaatatatttaaccttctgatgtagtatagtcctatg
cactctggaaaaactgaatgcttatttattcagatccagtcttgaattga
gtcaccaaatagatgttgtaagtggagctttgctcatgtctatttctgtt
tgtttccttcacgaagt
gaattcaacgttatagaacactctctacactccttctctgctataccttt
cactctcccatttcaatttagacctgcctattccatttttctttttcttt
tccttttttcctttttttttttttttttttgtgcaaaagcaagaggttta
ttttcctggcacattggggttgaccttccattagtctcttaaggtgagtg
actagaagttgacccctgaatggctattacaagcaggttttatacttttg
ttttgttttgtttgtttgtttgcttgcttgcttgtttgtttttgtttttc
aagacagggtttctctgtgtagctctggctgtactggaacttactctgta
gaccaggatttcctcgaactcagaaatccacctgcccccacctccacaag
tgctgggattaaaggcgtgcaccaccactgcccggctcagtttttatgct
ttttaggaacacaggttacatcaggttacagttcaaatttattgactaag
catattgacctttaaatctattgcctagcaagcatgggcagatcatggca
tgcatttgaactctaccggcaactttccagagggtcaggtgactatcagt
cagtacattctgtggtttttctgagaatttttacttaagaatgttcctgt
gagtggagaatggaatttggcctacctctgacctgaagcaggtgggtgtg
aggctggcaaaagcccctagggttctacatttccccttttttcttgtaca
agttccaatcctggagctacactcaggggtcttgggtaactaactcatat
tctcagtcctgtcctcagggtctcagagggttggcacggaccatcagttg
tactgcatctattctctcttttatgaaagctataagcttgttcagaatgc
aggtccaaaggtcacaattgcagacaacatttagggttctaacaagtaga
tatgaaggtgtttaccaaggggaggagttaaacaatacttggactcacct
gactctgttacttttcttcttcggctgctagcgtctacacttggcta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_43234307_43235369
seq2: B6Ng01-170K14.b_43_1102 (reverse)

seq1  GAAGAAAACAAAACAGAAATAGACATGAGCAAAGCTCCACTTACAACATC  50
      |||| |||| ||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGAAAC-AAACAGAAATAGACATGAGCAAAGCTCCACTTACAACATC  49

seq1  TTAATTGGTGACTCAATTCAAGACTGGATCTGAATAAATAAGCATTCAGT  100
       || ||||||||||||||||||||||||||||||||||||||||||||||
seq2  -TATTTGGTGACTCAATTCAAGACTGGATCTGAATAAATAAGCATTCAGT  98

seq1  TTTTCCAGAGTGCATAGGACTATACTACATCAGAAGGTTAAATATATTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCAGAGTGCATAGGACTATACTACATCAGAAGGTTAAATATATTCA  148

seq1  TTAAATGCTGTGTCAGAGAAGTGACATCCTAGAACCAATATGTTTTTGAT  200
       ||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  -TAAATGCTGTGTCAGAGAAGTGACATCCTAGAACCAATATG-TTTTGAT  196

seq1  TTCTTATTTCCTATCTACATAATG-AAGTACTGCTAGCACATGTACCTTT  249
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  TTCTTATTTCCTATCTACATAATGAAAGTACTGCTAGCACATGTACCTTT  246

seq1  TCCTTGTATCTATTATAGCCCCCCTCCCAAATCCAGCTAGAAATGTTTAG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTGTATCTATTATAGCCCCCCTCCCAAATCCAGCTAGAAATGTTTAG  296

seq1  AAGGTTTTGAATCAATAGGTGTGTATAACCATGGGACTGTTTGAAACTAT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTTTTGAATCAATAGGTGTGTATAACCATGGGACTGTTTGAAACTAT  346

seq1  ACAAGGTTCTGTGATTTAAATAACTGGTATCCAGCTGTGGGGAAGCTTCT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGGTTCTGTGATTTAAATAACTGGTATCCAGCTGTGGGGAAGCTTCT  396

seq1  TCCCAAATACTGCTGCTGTAGCTTGGGAATTTTTTTGTTCTGTTAATGTA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAAATACTGCTGCTGTAGCTTGGGAATTTTTTTGTTCTGTTAATGTA  446

seq1  CACTTTCAGCTATTTTATACTCAGGCATTATGGGATCAAGAACTACAGTA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTTCAGCTATTTTATACTCAGGCATTATGGGATCAAGAACTACAGTA  496

seq1  AAGCTCTTGGGCGAAAAGCAAGAGATTGACTTCTCTTCCTCATTAATATG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTCTTGGGCGAAAAGCAAGAGATTGACTTCTCTTCCTCATTAATATG  546

seq1  CAGGCGAGAAAGAGAACATGTGAACATAGTATGAGTGCACAGGAGATGTT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCGAGAAAGAGAACATGTGAACATAGTATGAGTGCACAGGAGATGTT  596

seq1  TTGACTCAACTTAGTATAGAAGCACATCTGAAATATACAATCACCACATG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACTCAACTTAGTATAGAAGCACATCTGAAATATACAATCACCACATG  646

seq1  ACTACATCACATCTGGCTAAGTGGTGACAGAAAATGTGTGTGGAGATGTC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACATCACATCTGGCTAAGTGGTGACAGAAAATGTGTGTGGAGATGTC  696

seq1  AAATTTCTTACAGACTAAATGTAAGGGATACTTCACATCACAGACCATGT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTCTTACAGACTAAATGTAAGGGATACTTCACATCACAGACCATGT  746

seq1  GTTTAAAGGGGTCTACTAAGTTCACTTTTATGTTCCTAGGAAGAACTGAT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTAAAGGGGTCTACTAAGTTCACTTTTATGTTCCTAGGAAGAACTGAT  796

seq1  AAAAGACAGAGAACGCAAAGGGGTTGATGGGGGAAGGCATAAGTGCTGCC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGACAGAGAACGCAAAGGGGTTGATGGGGGAAGGCATAAGTGCTGCC  846

seq1  CTCTCCATGCAACAGGGATGTATGGCATATACCTTCACTCATTTTCCACT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCCATGCAACAGGGATGTATGGCATATACCTTCACTCATTTTCCACT  896

seq1  CAACAAATGGAAGGTAAAGTTTTTACCACCCTTATTGATAGACCAAAGGA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAAATGGAAGGTAAAGTTTTTACCACCCTTATTGATAGACCAAAGGA  946

seq1  CTTGCACCTGGTAGAGGGAGTATTATTGTAATTTTTCTCTATGTTTTAGA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCACCTGGTAGAGGGAGTATTATTGTAATTTTTCTCTATGTTTTAGA  996

seq1  ATTATTTTATTGATAAATGTAGAATAGGAATAGAAAACCAACTCTCACAC  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTTTATTGATAAATGTAGAATAGGAATAGAAAACCAACTCTCACAC  1046

seq1  TTATTGGAGAATTC  1063
      ||||||||||||||
seq2  TTATTGGAGAATTC  1060

seq1: chr2_43077855_43078896
seq2: B6Ng01-170K14.g_68_1114

seq1  GAATTCAACGTTATAGAACACTCTCTACACTCCTTCTCTGCTATACCTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAACGTTATAGAACACTCTCTACACTCCTTCTCTGCTATACCTTT  50

seq1  CACTCTCCCATTTCAATTTAGACCTGCCTATTCCATTTTTCTTTTTCTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCTCCCATTTCAATTTAGACCTGCCTATTCCATTTTTCTTTTTCTTT  100

seq1  TCCTTTTTTCCTTTTTTTTTTTTTTTTTTTGTGCAAAAGCAAGAGGTTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTTTTCCTTTTTTTTTTTTTTTTTTTGTGCAAAAGCAAGAGGTTTA  150

seq1  TTTTCCTGGCACATTGGGGTTGACCTTCCATTAGTCTCTTAAGGTGAGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCTGGCACATTGGGGTTGACCTTCCATTAGTCTCTTAAGGTGAGTG  200

seq1  ACTAGAAGTTGACCCCTGAATGGCTATTACAAGCAGGTTTTATACTTTTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGAAGTTGACCCCTGAATGGCTATTACAAGCAGGTTTTATACTTTTG  250

seq1  TTTTGTTTTGTTTGTTTGTTTGCTTGCTTGCTTGTTTGTTTTTGTTTTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTTTTGTTTGTTTGTTTGCTTGCTTGCTTGTTTGTTTTTGTTTTTC  300

seq1  AAGACAGGGTTTCTCTGTGTAGCTCTGGCTGTACTGGAACTTACTCTGTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACAGGGTTTCTCTGTGTAGCTCTGGCTGTACTGGAACTTACTCTGTA  350

seq1  GACCAGGATTTCCTCGAACTCAGAAATCCACCTGCCCCCACCTCCACAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCAGGATTTCCTCGAACTCAGAAATCCACCTGCCCCCACCTCCACAAG  400

seq1  TGCTGGGATTAAAGGCGTGCACCACCACTGCCCGGCTCAGTTTTTATGCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGGGATTAAAGGCGTGCACCACCACTGCCCGGCTCAGTTTTTATGCT  450

seq1  TTTTAGGAACACAGGTTACATCAGGTTACAGTTCAAATTTATTGACTAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAGGAACACAGGTTACATCAGGTTACAGTTCAAATTTATTGACTAAG  500

seq1  CATATTGACCTTTAAATCTATTGCCTAGCAAGCATGGGCAGATCATGGCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATTGACCTTTAAATCTATTGCCTAGCAAGCATGGGCAGATCATGGCA  550

seq1  TGCATTTGAACTCTACCGGCAACTTTCCAGAGGGTCAGGTGACTATCAGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATTTGAACTCTACCGGCAACTTTCCAGAGGGTCAGGTGACTATCAGT  600

seq1  CAGTACATTCTGTGGTTTTTCTGAGAATTTTTACTTAAGAATGTTCCTGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTACATTCTGTGGTTTTTCTGAGAATTTTTACTTAAGAATGTTCCTGT  650

seq1  GAGTGGAGAATGGAATTTGGCCTACCTCTGACCTGAAGCAGGTGGGTGTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGGAGAATGGAATTTGGCCTACCTCTGACCTGAAGCAGGTGGGTGTG  700

seq1  AGGCTGGCAAAAGCCCCTAGGGTTCTACATTTCCCCTTTTTTCTTGTACA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTGGCAAAAGCCCCTAGGGTTCTACATTTCCCCTTTTTTCTTGTACA  750

seq1  AGTTCCAATCCTGGAGCTACACTCAGGGGTCTTGGGTAACTAACTCATAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCCAATCCTGGAGCTACACTCAGGGGTCTTGGGTAACTAACTCATAT  800

seq1  TCTCAGGTCCTGTCCTCAGGGTCTCAGAGGGTTGGCACAGGACCATCAGT  850
      ||||| |||||||||||||||||||||||||||||||| |||||||||||
seq2  TCTCA-GTCCTGTCCTCAGGGTCTCAGAGGGTTGGCAC-GGACCATCAGT  848

seq1  TGTACTGCATCTATTCTCTCTTTTATGAAAGCTATAAGCTTGTTCAGAAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACTGCATCTATTCTCTCTTTTATGAAAGCTATAAGCTTGTTCAGAAT  898

seq1  GCAGGGTCCAAAGGTCAACAATTGCAGGACAACAATTAGGGGTCCTAACA  950
      ||| |||||||||||| ||||||||| ||||||| ||| |||| ||||||
seq2  GCA-GGTCCAAAGGTC-ACAATTGCA-GACAACATTTA-GGGTTCTAACA  944

seq1  AGTTAGATATGAAGGTGTTTACCAAGGGGAGGAGTTAAACCAATACTTGA  1000
      || |||||||||||||||||||||||||||||||||||| ||||||||| 
seq2  AG-TAGATATGAAGGTGTTTACCAAGGGGAGGAGTTAAA-CAATACTTGG  992

seq1  ACTCACCCTGACTCTGTTCACTTTCTCTCTTCTGCTTGGCTA--------  1042
      ||||| |||||||||||| |||||   ||||| |||  ||||        
seq2  ACTCA-CCTGACTCTGTT-ACTTTTCTTCTTCGGCT--GCTAGCGTCTAC  1038

seq1  ---------  1042
               
seq2  ACTTGGCTA  1047