BAC Information

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BAC

Clone NameB6Ng01-171D18
Chromosome2 (Build37)
Map Location 72,156,175 - 72,311,752
singlet/doubletdoublet
Overlap geneB230120H23Rik
Upstream geneSlc25a12, LOC667528, Hat1, LOC100040177, Metapl1, LOC100040207, Dlx1, Dlx1as, Dlx2, Gm1631, Itga6, Pdk1, Rapgef4, LOC100040270
Downstream geneCdca7, LOC383712, LOC635960, LOC100039928, 6430710C18Rik, Sp3, Hspe1-ps5, Gtpbp9, LOC620110, Sp9, 1700023B02Rik, Scrn3, Gpr155, Wipf1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-171D18.bB6Ng01-171D18.g
ACCGA000173GA000174
length539934
definitionB6Ng01-171D18.b B6Ng01-171D18.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(72,311,208 - 72,311,752)(72,156,175 - 72,156,716)
sequence
ttccccattcatttatttattcactttacataccctgcccttccctcctc
ccagacccccaccccaaaccccagttaatcctctctggaaacaccctgaa
gactcactcaggggcacacttcaataatcccctaggcacttctcagtgtc
accaagttgacaagattagctatcaccaccccctcaaaaagaaaaaaaag
gatatgactacaggaaaagaacagtggcgtaggcatgtaacaggatttaa
acaactgttcagagcggctctcttgcatcggtgaagctagctcctcacac
aaggttgagggggaaagcaaatggcaaatgcctcggagaaggctaacccc
taacaaaattgaaaagcacaaaaacagaagaactgtggaagaagaaaatg
tgaacaggtggaagaagatagccattaaccctcaagagagaaagggagga
aggagggaggaggcgggaaagactgggactgcagtgtcacagtgctttct
aagagggaaggaggaggagggaaaggaggaggaggagga
gaattctgtcccagagacaaaagctgatcacgtaacttccttgcagtagc
ccagttctccctcagtaattcagtctccagtcaggagagaaacttttttt
tttaactgtttgtaagtttagtagtagacaagaactttaaaatagccaag
tggcattctcatattttaattcagtaggatcattatgtcccctagcagga
tcatttttacattctatacttggaaccgaaagtctctgaatgtcattgtc
cccatgtaaagtccccgaatgtcagaggccattgttactgagataattat
tagacgtggaagtgatagggaccaccctcaccttcagtccagatccatgt
gcgtagaggagacagtggttggggctgagggtatataattcatcccgtaa
atgttgcagctgttgtccctcagctgctcctgtaactgagtctccagtgg
gctgctctgcttttctgctagtcagttgctgcttaaggggagggctgtgt
ggtgagtttggcttagttaatcccaccactgctatgagacgattgcttca
cttcctggactgtgagtggtttccttcagcagcagctgacagtggaatac
taacatggtgaaaaaggccttctgtgaggcagtggatgaagaagctgtca
gcagcattgcagctggggatggcaaattcttatccaggagatgtgtttat
ggaggaagatgaattccctccccgaactccagtgccctcaatctgtcctc
tttggaatggtgacagttgggctcagagtctcttattagcagatctgata
tatacttaccagaaccagcagacagttcagccttgttaaggggaaagttg
tgttatagctctacatatgggtccccagccttacaatcatagccaccttg
ttctcaagctcaatgagcatgccctggatagcta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_72311208_72311752
seq2: B6Ng01-171D18.b_46_590 (reverse)

seq1  TCCTCCTCCTCCTCCTTTCCCTCCTCCTCCTTCCCTCTTAGAAAGCACTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCCTCCTCCTCCTTTCCCTCCTCCTCCTTCCCTCTTAGAAAGCACTG  50

seq1  TGACACTGCAGTCCCAGTCTTTCCCGCCTCCTCCCTCCTTCCTCCCTTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACACTGCAGTCCCAGTCTTTCCCGCCTCCTCCCTCCTTCCTCCCTTTC  100

seq1  TCTCTTGAGGGTTAATGGCTATCTTCTTCCACCTGTTCACATTTTCTTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTGAGGGTTAATGGCTATCTTCTTCCACCTGTTCACATTTTCTTCT  150

seq1  TCCACAGTTCTTCTGTTTTTGTGCTTTTCAATTTTGTTAGGGGTTAGCCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACAGTTCTTCTGTTTTTGTGCTTTTCAATTTTGTTAGGGGTTAGCCT  200

seq1  TCTCCGAGGCATTTGCCATTTGCTTTCCCCCTCAACCTTGTGTGAGGAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCGAGGCATTTGCCATTTGCTTTCCCCCTCAACCTTGTGTGAGGAGC  250

seq1  TAGCTTCACCGATGCAAGAGAGCCGCTCTGAACAGTTGTTTAAATCCTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTTCACCGATGCAAGAGAGCCGCTCTGAACAGTTGTTTAAATCCTGT  300

seq1  TACATGCCTACGCCACTGTTCTTTTCCTGTAGTCATATCCTTTTTTTTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATGCCTACGCCACTGTTCTTTTCCTGTAGTCATATCCTTTTTTTTCT  350

seq1  TTTTGAGGGGGTGGTGATAGCTAATCTTGTCAACTTGGTGACACTGAGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGAGGGGGTGGTGATAGCTAATCTTGTCAACTTGGTGACACTGAGAA  400

seq1  GTGCCTAGGGGATTATTGAAGTGTGCCCCTGAGTGAGTCTTCAGGGTGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCCTAGGGGATTATTGAAGTGTGCCCCTGAGTGAGTCTTCAGGGTGTT  450

seq1  TCCAGAGAGGATTAACTGGGGTTTGGGGTGGGGGTCTGGGAGGAGGGAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGAGAGGATTAACTGGGGTTTGGGGTGGGGGTCTGGGAGGAGGGAAG  500

seq1  GGCAGGGTATGTAAAGTGAATAAATAAATGAATGGGGAAGAATTC  545
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGGGTATGTAAAGTGAATAAATAAATGAATGGGGAAGAATTC  545

seq1: chr2_72156175_72156716
seq2: B6Ng01-171D18.g_65_606

seq1  GAATTCTGTCCCAGAGACAAAAGCTGATCACGTAACTTCCTTGCAGTAGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTCCCAGAGACAAAAGCTGATCACGTAACTTCCTTGCAGTAGC  50

seq1  CCAGTTCTCCCTCAGTAATTCAGTCTCCAGTCAGGAGAGAAACTTTTTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTTCTCCCTCAGTAATTCAGTCTCCAGTCAGGAGAGAAACTTTTTTT  100

seq1  TTTAACTGTTTGTAAGTTTAGTAGTAGACAAGAACTTTAAAATAGCCAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAACTGTTTGTAAGTTTAGTAGTAGACAAGAACTTTAAAATAGCCAAG  150

seq1  TGGCATTCTCATATTTTAATTCAGTAGGATCATTATGTCCCCTAGCAGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCATTCTCATATTTTAATTCAGTAGGATCATTATGTCCCCTAGCAGGA  200

seq1  TCATTTTTACATTCTATACTTGGAACCGAAAGTCTCTGAATGTCATTGTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTTTACATTCTATACTTGGAACCGAAAGTCTCTGAATGTCATTGTC  250

seq1  CCCATGTAAAGTCCCCGAATGTCAGAGGCCATTGTTACTGAGATAATTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATGTAAAGTCCCCGAATGTCAGAGGCCATTGTTACTGAGATAATTAT  300

seq1  TAGACGTGGAAGTGATAGGGACCACCCTCACCTTCAGTCCAGATCCATGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACGTGGAAGTGATAGGGACCACCCTCACCTTCAGTCCAGATCCATGT  350

seq1  GCGTAGAGGAGACAGTGGTTGGGGCTGAGGGTATATAATTCATCCCGTAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGTAGAGGAGACAGTGGTTGGGGCTGAGGGTATATAATTCATCCCGTAA  400

seq1  ATGTTGCAGCTGTTGTCCCTCAGCTGCTCCTGTAACTGAGTCTCCAGTGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTGCAGCTGTTGTCCCTCAGCTGCTCCTGTAACTGAGTCTCCAGTGG  450

seq1  GCTGCTCTGCTTTTCTGCTAGTCAGTTGCTGCTTAAGGGGAGGGCTGTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCTCTGCTTTTCTGCTAGTCAGTTGCTGCTTAAGGGGAGGGCTGTGT  500

seq1  GGTGAGTTTGGCTTAGTTAATCCCACCACTGCTATGAGACGA  542
      ||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGAGTTTGGCTTAGTTAATCCCACCACTGCTATGAGACGA  542