BAC Information

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BAC

Clone NameB6Ng01-172D16
Chromosome2 (Build37)
Map Location 141,596,429 - 141,781,208
singlet/doubletdoublet
Overlap genenone
Upstream genenone
Downstream geneLOC668913, LOC668914, Kif16b
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-172D16.bB6Ng01-172D16.g
ACCGA000902GA000903
length7931,065
definitionB6Ng01-172D16.b B6Ng01-172D16.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(141,596,429 - 141,597,221)(141,780,171 - 141,781,208)
sequence
gaattcatgaaattcttatggatgtatctggaggatatcatccttagtga
ggtaacacaaccacaaaagaagtcattagatatgcactcactggtaaatg
aatattagctcagaaacataggacacccaagatacaatttgcaaaacaca
agaaaaacaagaagaacgaagaccaaagtgtggacactttgccccttctt
agaattgggaagaaaatacccatgaaaggatttacagagcttgcttgttc
tttgaccttgaatcaaactgtggtatctttaagaataaaatcataacatc
tatgtagagtggtaaccaagagcaatgacaatatcctatattatttgtgg
gagcaactagggcctcctaagccaacaactcataaggacgtatctaacag
ctggcagtgaaatttttctttaattgtctatggtctctgagaataacagc
attatttgcccatgcaggtcatctcttcaaattcctcattttttttagac
tttttaatttgcctataaaatagtgaaataccatatggctttcatcccac
atattatcttagaacagcattatagggtactctttcagaaagatagatat
agatctccaatatttatatatcattttgtcaagagaggtcccaaattact
tgctatctgtgtgtcaaggggaagtctcctgtatgtaccagcatgttcta
taaattataggaagaatgggaacatgtccttgcccacatagagctcacca
gtcctctctctctctctctctctctctctctctctctctctct
gaattcaatagcaccaggcaatggcggtcattgtttatattctggatttg
tcaaaagaagaatctgggaacttaattaagttcctggaggccactcagca
attcagttcccaagacaaagagaagccagtgcctgtggcccagaaccatg
ctgcccccctctgtggtgactgctggccctgtctaatgacctggaatctt
tttctgatgcactctgagtgtggcacatgacttttccctcgtctcaatat
ttgggtcttttaaaaagtagtcatttcttatctattccaagccatcttac
acttctgcttgcaagcttcagggagaataccctattaggaaagcagaaaa
aaagaaaacaaaggctgctttccatttcaatggggatatttttatttctc
cctttcctggaaagaatagagagcctctcagagcattggcaggagggagg
acaataaaaagcctgaagttgccatgtttttgtgaggaatgccattccat
ttgtctagtacagaggttttattcctcttagagccaagtccttcatgttt
gttacatagccaggtggcatagaaaaatgtatggcatgtttcccagggaa
ctcgtcacagcatgtgcttttaactcaattgacattaaacctaataaaaa
atatatgagtcttccctatcatttccactcactaaaagaagtttcaatcc
tgtggcatggattttaattaaatttggacatcgtatacccaattgggaaa
ttcccaaaagagagcccaaatctttatgtaaacttcagttttttctaggc
aaagacagagagacaagtgatgttcattttctgggtttagggtttaaaat
gtaatgagtgagatttccgacttgatgttgaagattaaaactgttcacat
cttgcatctgggagggccactagagaagtgatattctaaaaataaaggcc
agcctggcagcccttctgaagccttctcacttcttagggaagaaagtgga
tccttcacttcatcttgaagcccatgggggccacctttttttctcaataa
ccaatcctcagtatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_141596429_141597221
seq2: B6Ng01-172D16.b_29_821

seq1  GAATTCATGAAATTCTTATGGATGTATCTGGAGGATATCATCCTTAGTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATGAAATTCTTATGGATGTATCTGGAGGATATCATCCTTAGTGA  50

seq1  GGTAACACAACCACAAAAGAAGTCATTAGATATGCACTCACTGGTAAATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAACACAACCACAAAAGAAGTCATTAGATATGCACTCACTGGTAAATG  100

seq1  AATATTAGCTCAGAAACATAGGACACCCAAGATACAATTTGCAAAACACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTAGCTCAGAAACATAGGACACCCAAGATACAATTTGCAAAACACA  150

seq1  AGAAAAACAAGAAGAACGAAGACCAAAGTGTGGACACTTTGCCCCTTCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAACAAGAAGAACGAAGACCAAAGTGTGGACACTTTGCCCCTTCTT  200

seq1  AGAATTGGGAAGAAAATACCCATGAAAGGATTTACAGAGCTTGCTTGTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATTGGGAAGAAAATACCCATGAAAGGATTTACAGAGCTTGCTTGTTC  250

seq1  TTTGACCTTGAATCAAACTGTGGTATCTTTAAGAATAAAATCATAACATC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGACCTTGAATCAAACTGTGGTATCTTTAAGAATAAAATCATAACATC  300

seq1  TATGTAGAGTGGTAACCAAGAGCAATGACAATATCCTATATTATTTGTGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTAGAGTGGTAACCAAGAGCAATGACAATATCCTATATTATTTGTGG  350

seq1  GAGCAACTAGGGCCTCCTAAGCCAACAACTCATAAGGACGTATCTAACAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAACTAGGGCCTCCTAAGCCAACAACTCATAAGGACGTATCTAACAG  400

seq1  CTGGCAGTGAAATTTTTCTTTAATTGTCTATGGTCTCTGAGAATAACAGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCAGTGAAATTTTTCTTTAATTGTCTATGGTCTCTGAGAATAACAGC  450

seq1  ATTATTTGCCCATGCAGGTCATCTCTTCAAATTCCTCATTTTTTTTAGAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTTGCCCATGCAGGTCATCTCTTCAAATTCCTCATTTTTTTTAGAC  500

seq1  TTTTTAATTTGCCTATAAAATAGTGAAATACCATATGGCTTTCATCCCAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTAATTTGCCTATAAAATAGTGAAATACCATATGGCTTTCATCCCAC  550

seq1  ATATTATCTTAGAACAGCATTATAGGGTACTCTTTCAGAAAGATAGATAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTATCTTAGAACAGCATTATAGGGTACTCTTTCAGAAAGATAGATAT  600

seq1  AGATCTCCAATATTTATATATCATTTTGTCAAGAGAGGTCCCAAATTACT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCTCCAATATTTATATATCATTTTGTCAAGAGAGGTCCCAAATTACT  650

seq1  TGCTATCTGTGTGTCAAGGGGAAGTCTCCTGTATGTACCAGCATGTTCTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTATCTGTGTGTCAAGGGGAAGTCTCCTGTATGTACCAGCATGTTCTA  700

seq1  TAAATTATAGGAAGAATGGGAACATGTCCTTGCCCACATAGAGCTCACCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTATAGGAAGAATGGGAACATGTCCTTGCCCACATAGAGCTCACCA  750

seq1  GTCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT  793
      |||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT  793

seq1: chr2_141780171_141781208
seq2: B6Ng01-172D16.g_66_1130 (reverse)

seq1  AATACTGA-GATT-GTTAATGAGAAAAAAA-GTGG-CACCATGGGC-TCA  45
      |||||||| |||| |||| ||||||||||| |||| | |||||||| |||
seq2  AATACTGAGGATTGGTTATTGAGAAAAAAAGGTGGCCCCCATGGGCTTCA  50

seq1  AGATG-AGTGAA-GATCCAC-TTCTTCC--TAGGAGTGAGAAGGC-TCAG  89
      ||||| |||||| ||||||| |||||||   || ||||||||||| ||||
seq2  AGATGAAGTGAAGGATCCACTTTCTTCCCTAAGAAGTGAGAAGGCTTCAG  100

seq1  AA-GGCTG-CAGGCTGGCCTTTA-TTCTGGAATATCACTTCTCTAGTGGC  136
      || ||||| |||||||||||||| || | |||||||||||||||||||||
seq2  AAGGGCTGCCAGGCTGGCCTTTATTTTTAGAATATCACTTCTCTAGTGGC  150

seq1  C--TCCAGATGC-AGATGTGTACAGTTTTAATC-TCAACATC-AGTCGGA  181
      |   |||||||| ||||||| |||||||||||| |||||||| |||||||
seq2  CCTCCCAGATGCAAGATGTGAACAGTTTTAATCTTCAACATCAAGTCGGA  200

seq1  AATCTCACTCATTACATTTTAAACCCTAAA-CCAGAAAATGAACATCACT  230
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  AATCTCACTCATTACATTTTAAACCCTAAACCCAGAAAATGAACATCACT  250

seq1  TGTCTCTCTGTCTTTGCCTAG-AAAAACTGAAGTTTACATAAAGATTT-G  278
      ||||||||||||||||||||| |||||||||||||||||||||||||| |
seq2  TGTCTCTCTGTCTTTGCCTAGAAAAAACTGAAGTTTACATAAAGATTTGG  300

seq1  GCTCTC-TTTGGGAATTTCCCAATTGGGTATACGATGTCCAAATTTAATT  327
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTCTTTTGGGAATTTCCCAATTGGGTATACGATGTCCAAATTTAATT  350

seq1  AAAATCCATGCCACAGGATTGAAACTTC-TTTAGTGAGTGGAAATGATA-  375
      |||||||||||||||||||||||||||| |||||||||||||||||||| 
seq2  AAAATCCATGCCACAGGATTGAAACTTCTTTTAGTGAGTGGAAATGATAG  400

seq1  GGAAGACTCATATATTTTTTATTAGGTTTAATGTCAATTGAGTT-AAAGC  424
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  GGAAGACTCATATATTTTTTATTAGGTTTAATGTCAATTGAGTTAAAAGC  450

seq1  ACATGCTGTGACGAGTTCCCTGGG-AACATGCCATACATTTTTCTATGCC  473
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  ACATGCTGTGACGAGTTCCCTGGGAAACATGCCATACATTTTTCTATGCC  500

seq1  ACCTGGCTATGTAACAAACATGAAGGACTTGGCTCTAAGAGGAATAAAAC  523
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGGCTATGTAACAAACATGAAGGACTTGGCTCTAAGAGGAATAAAAC  550

seq1  CTCTGTACTAGACAAATGGAATGGCATTCCTCACAAAAACATGGCAACTT  573
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTACTAGACAAATGGAATGGCATTCCTCACAAAAACATGGCAACTT  600

seq1  CAGGCTTTTTATTGTCCTCCCTCCTGCCAATGCTCTGAGAGGCTCTCTAT  623
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCTTTTTATTGTCCTCCCTCCTGCCAATGCTCTGAGAGGCTCTCTAT  650

seq1  TCTTTCCAGGAAAGGGAGAAATAAAAATATCCCCATTGAAATGGAAAGCA  673
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCCAGGAAAGGGAGAAATAAAAATATCCCCATTGAAATGGAAAGCA  700

seq1  GCCTTTGTTTTCTTTTTTTCTGCTTTCCTAATAGGGTATTCTCCCTGAAG  723
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTTGTTTTCTTTTTTTCTGCTTTCCTAATAGGGTATTCTCCCTGAAG  750

seq1  CTTGCAAGCAGAAGTGTAAGATGGCTTGGAATAGATAAGAAATGACTACT  773
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCAAGCAGAAGTGTAAGATGGCTTGGAATAGATAAGAAATGACTACT  800

seq1  TTTTAAAAGACCCAAATATTGAGACGAGGGAAAAGTCATGTGCCACACTC  823
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAAAGACCCAAATATTGAGACGAGGGAAAAGTCATGTGCCACACTC  850

seq1  AGAGTGCATCAGAAAAAGATTCCAGGTCATTAGACAGGGCCAGCAGTCAC  873
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTGCATCAGAAAAAGATTCCAGGTCATTAGACAGGGCCAGCAGTCAC  900

seq1  CACAGAGGGGGGCAGCATGGTTCTGGGCCACAGGCACTGGCTTCTCTTTG  923
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGAGGGGGGCAGCATGGTTCTGGGCCACAGGCACTGGCTTCTCTTTG  950

seq1  TCTTGGGAACTGAATTGCTGAGTGGCCTCCAGGAACTTAATTAAGTTCCC  973
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGGGAACTGAATTGCTGAGTGGCCTCCAGGAACTTAATTAAGTTCCC  1000

seq1  AGATTCTTCTTTTGACAAATCCAGAATATAAACAATGACCGCCATTGCCT  1023
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTCTTCTTTTGACAAATCCAGAATATAAACAATGACCGCCATTGCCT  1050

seq1  GGTGCTATTGAATTC  1038
      |||||||||||||||
seq2  GGTGCTATTGAATTC  1065