MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-172M05
Chromosome	2 (Build37)
Map Location	11,833,154 - 11,974,550
singlet/doublet	doublet
Overlap gene	EG635919
Upstream gene	LOC100040690, LOC100040703, LOC667192, Prkcq, LOC100040733, LOC100040898, LOC667211, Pfkfb3, Rbm17, Il2ra, Il15ra, Fbxo18, Ankrd16
Downstream gene	LOC667247, Itga8, 2310047O13Rik, LOC100040837, Pter, C1ql3
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC100040690 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040690
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 Proteins pseudo : _no_value

name	LOC100040703 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040703
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	LOC667192 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667192
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 ESTs, 7 Proteins pseudo : _no_value

name	Prkcq (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18761 MGI:97601
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040733 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040733
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 6 ESTs

name	LOC100040898 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040898
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 133 mRNAs, 3939 ESTs, 23 Proteins

name	LOC667211 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667211
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 18 Proteins pseudo : _no_value

name	Pfkfb3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:170768 MGI:2181202
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rbm17 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:76938 MGI:1924188
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Il2ra (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16184 MGI:96549
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Il15ra (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16169 MGI:104644
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Fbxo18 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:50755 MGI:1354699
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ankrd16 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:320816 MGI:2444796
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG635919 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:635919 MGI:3643570
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins

name	LOC667247 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667247
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 23 ESTs, 5 Proteins pseudo : _no_value

name	Itga8 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:241226 MGI:109442
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	2310047O13Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66960 MGI:1914210
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040837 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040837
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	Pter (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19212 MGI:107372
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	C1ql3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:227580 MGI:2387350
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Prkcq (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130636 GeneID:18761 MGI:97601
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : protein kinase C, theta transcript_id : NM_008859.2

name	LOC100040733 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149248884 GeneID:100040733
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 6 ESTs product : similar to pol protein transcript_id : XM_001475160.1

name	LOC100040898 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149248896 GeneID:100040898
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 92 mRNAs, 1945 ESTs, 23 Proteins product : similar to Glyceraldehyde-3-phosphate dehydrogenase (GAPDH), transcript variant 2 transcript_id : XM_001475541.1

name	LOC100040898 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149248894 GeneID:100040898
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 133 mRNAs, 3938 ESTs, 23 Proteins product : similar to Glyceraldehyde-3-phosphate dehydrogenase (GAPDH), transcript variant 1 transcript_id : XM_001475515.1

name	Pfkfb3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:87298846 GeneID:170768 MGI:2181202
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : 6-phosphofructo-2-kinase/fructose-2, 6-biphosphatase 3 transcript_id : NM_133232.2

name	Rbm17 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:22779923 GeneID:76938 MGI:1924188
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RNA binding motif protein 17 transcript_id : NM_152824.1

name	Il2ra (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:34556198 GeneID:16184 MGI:96549
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : interleukin 2 receptor, alpha chain transcript_id : NM_008367.2

name	Il15ra (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:19745159 GeneID:16169 MGI:104644
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : interleukin 15 receptor, alpha chain transcript_id : NM_133836.1

name	Il15ra (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6680408 GeneID:16169 MGI:104644
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : interleukin 15 receptor, alpha chain transcript_id : NM_008358.1

name	Fbxo18 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:21703349 GeneID:50755 MGI:1354699
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : F-box protein 18 transcript_id : NM_015792.1

name	Ankrd16 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31343209 GeneID:320816 MGI:2444796
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ankyrin repeat domain 16 transcript_id : NM_177268.2

name	EG635919 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149248890 GeneID:635919 MGI:3643570
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins product : predicted gene, EG635919 transcript_id : XM_989243.2

name	Itga8 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118131074 GeneID:241226 MGI:109442
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : integrin alpha 8 transcript_id : NM_001001309.2

name	2310047O13Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:70980532 GeneID:66960 MGI:1914210
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2310047O13 gene transcript_id : NM_024185.4

name	Pter (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:89111133 GeneID:19212 MGI:107372
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : phosphotriesterase related transcript_id : NM_008961.2

name	C1ql3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:109689714 GeneID:227580 MGI:2387350
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : C1q-like 3 transcript_id : NM_153155.2

name	Prkcq (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6679353 CCDS:CCDS15682.1 GeneID:18761 MGI:97601
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0001772 - immunological synapse [Evidence IDA]; GO:0005886 - plasma membrane [Evidence IDA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0019992 - diacylglycerol binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004672 - protein kinase activity [Evidence IEA]; GO:0004697 - protein kinase C activity [Evidence IDA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0051092 - activation of NF-kappaB transcription factor [Evidence ISS]; GO:0007242 - intracellular signaling cascade [Evidence IMP]; GO:0045086 - positive regulation of interleukin-2 biosynthesis [Evidence IMP]; GO:0050870 - positive regulation of T cell activation [Evidence IMP]; GO:0042102 - positive regulation of T cell proliferation [Evidence IMP]; GO:0006468 - protein amino acid phosphorylation [Evidence IDA] codon_start : 1 note : PKC theta product : protein kinase C, theta protein_id : NP_032885.1

name	LOC100040733 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149248885 GeneID:100040733
definition	codon_start : 1 product : similar to pol protein protein_id : XP_001475210.1

name	LOC100040898 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149248895 GeneID:100040898
definition	codon_start : 1 product : similar to Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) isoform 1 protein_id : XP_001475565.1

name	LOC100040898 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149248897 GeneID:100040898
definition	codon_start : 1 product : similar to Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) isoform 2 protein_id : XP_001475591.1

name	Pfkfb3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:87298847 CCDS:CCDS15683.1 GeneID:170768 MGI:2181202
definition	codon_start : 1 note : inducible 6-phosphofructo-2-kinase; 6-phosphofructo-2-kinase/fructose-2,6-biphosphata se 3 product : 6-phosphofructo-2-kinase/fructose-2, 6-biphosphatase 3 protein_id : NP_573495.2

name	Rbm17 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:22779924 CCDS:CCDS15684.1 GeneID:76938 MGI:1924188
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0005681 - spliceosome complex [Evidence TAS] [Evidence IEA] GO_function : GO:0000166 - nucleotide binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]; GO:0031202 - RNA splicing factor activity, transesterification mechanism [Evidence TAS] GO_process : GO:0006397 - mRNA processing [Evidence IEA]; GO:0000398 - nuclear mRNA splicing, via spliceosome [Evidence IEA]; GO:0008380 - RNA splicing [Evidence TAS] codon_start : 1 product : RNA binding motif protein 17 protein_id : NP_690037.1

name	Il2ra (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:34556199 CCDS:CCDS15685.1 GeneID:16184 MGI:96549
definition	GO_component : GO:0009897 - external side of plasma membrane [Evidence IDA] GO_function : GO:0019976 - interleukin-2 binding [Evidence IPI]; GO:0004911 - interleukin-2 receptor activity [Evidence IMP]; GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0006924 - activated T cell apoptosis [Evidence IMP]; GO:0050728 - negative regulation of inflammatory response [Evidence IMP]; GO:0042130 - negative regulation of T cell proliferation [Evidence IMP]; GO:0042104 - positive regulation of activated T cell proliferation [Evidence IMP]; GO:0043065 - positive regulation of apoptosis [Evidence IMP]; GO:0043029 - T cell homeostasis [Evidence IMP] codon_start : 1 exception : mismatches in translation note : IL-2R alpha chain; p55 chain product : interleukin 2 receptor, alpha chain protein_id : NP_032393.2

name	Il15ra (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6680409 CCDS:CCDS15686.1 GeneID:16169 MGI:104644
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO:0005887 - integral to plasma membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0004907 - interleukin receptor activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0007166 - cell surface receptor linked signal transduction [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1 product : interleukin 15 receptor, alpha chain isoform 1 protein_id : NP_032384.1

name	Il15ra (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:19745160 CCDS:CCDS15687.1 GeneID:16169 MGI:104644
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO:0005887 - integral to plasma membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0004907 - interleukin receptor activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0007166 - cell surface receptor linked signal transduction [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2 product : interleukin 15 receptor, alpha chain isoform 2 protein_id : NP_598597.1

name	Fbxo18 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21703350 CCDS:CCDS15688.1 GeneID:50755 MGI:1354699
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0004003 - ATP-dependent DNA helicase activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0004386 - helicase activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA] GO_process : GO:0006281 - DNA repair [Evidence IEA]; GO:0006512 - ubiquitin cycle [Evidence IEA] codon_start : 1 note : F-box only protein 18 product : F-box protein 18 protein_id : NP_056607.1

name	Ankrd16 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28893341 GeneID:320816 MGI:2444796
definition	GO_function : GO:0003677 - DNA binding [Evidence IEA] codon_start : 1 product : ankyrin repeat domain 16 protein_id : NP_796242.1

name	EG635919 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149248891 GeneID:635919 MGI:3643570
definition	codon_start : 1 product : similar to Ankrd26 protein protein_id : XP_994337.2

name	Itga8 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:47717127 CCDS:CCDS15689.1 GeneID:241226 MGI:109442
definition	GO_component : GO:0045177 - apical part of cell [Evidence IDA]; GO:0016021 - integral to membrane [Evidence IEA] GO_function : GO:0005515 - protein binding [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0030030 - cell projection organization and biogenesis [Evidence IMP]; GO:0030198 - extracellular matrix organization and biogenesis [Evidence IMP]; GO:0042472 - inner ear morphogenesis [Evidence IMP]; GO:0007229 - integrin-mediated signaling pathway [Evidence IEA]; GO:0007613 - memory [Evidence IMP] codon_start : 1 product : integrin alpha 8 protein_id : NP_001001309.1

name	2310047O13Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:15277329 CCDS:CCDS15690.1 GeneID:66960 MGI:1914210
definition	GO_function : GO:0005509 - calcium ion binding [Evidence IEA] codon_start : 1 note : caspase recruitment domain containing protein product : 2310047O13Rik protein protein_id : NP_077147.2

name	Pter (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6679525 CCDS:CCDS15691.1 GeneID:19212 MGI:107372
definition	GO_function : GO:0016787 - hydrolase activity [Evidence IEA]; GO:0016788 - hydrolase activity, acting on ester bonds [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0009056 - catabolism [Evidence IEA] codon_start : 1 note : parathion hydrolase (phosphotriesterase)-related protein product : phosphotriesterase related protein_id : NP_032987.1

name	C1ql3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:23680960 CCDS:CCDS15692.1 GeneID:227580 MGI:2387350
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0005737 - cytoplasm [Evidence IEA] GO_function : GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0006817 - phosphate transport [Evidence IEA] codon_start : 1 note : gliacolin; C1q-like product : C1q-like 3 protein_id : NP_694795.1

name	LOC100040690 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040690
definition	number : 3 pseudo : _no_value

name	LOC100040690 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040690
definition	number : 2 pseudo : _no_value

name	LOC100040690 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040690
definition	number : 1 pseudo : _no_value

name	LOC100040703 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040703
definition	number : 1 pseudo : _no_value

name	LOC100040703 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040703
definition	number : 2 pseudo : _no_value

name	LOC667211 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667211
definition	number : 1 pseudo : _no_value

name	LOC100040837 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040837
definition	number : 8 pseudo : _no_value

name	LOC100040837 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040837
definition	number : 7 pseudo : _no_value

name	LOC100040837 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040837
definition	number : 6 pseudo : _no_value

name	LOC100040837 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040837
definition	number : 5 pseudo : _no_value

name	LOC100040837 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040837
definition	number : 4 pseudo : _no_value

name	LOC100040837 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040837
definition	number : 3 pseudo : _no_value

name	LOC100040837 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040837
definition	number : 2 pseudo : _no_value

name	LOC100040837 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040837
definition	number : 1 pseudo : _no_value

name	LOC667192 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149248893 GeneID:667192
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 ESTs, 7 Proteins product : similar to zinc finger and BTB domain containing 2 pseudo : _no_value transcript_id : XR_032260.1

name	LOC667247 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149248892 GeneID:667247
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 23 ESTs, 5 Proteins product : similar to karyopherin (importin) alpha 2 pseudo : _no_value transcript_id : XR_032162.1

clone name	MSMg01-261H16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-531H07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-348I06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-341E06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-191M09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-434L01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-190B24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-321I06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-381L23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-158M22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-318E09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-546M05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-124L18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-521G13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-150F13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-448H20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-380C19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-506P20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-532J06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-165P13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-370N10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-131L21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-121N18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-490P12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-442G21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-322L01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-330L11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-103M13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-443E08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-532J13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-540P04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-339A08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-521J08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-518G21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-411I16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-418J01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-428P01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-176I21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-174G21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-383P23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-501P21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-349N16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-521F20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-501P16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-136N20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-402F07
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-402F09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-112I13
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-373I21
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-379D09
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-416K07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-465A03
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-153N04
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-346G19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-315L04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-408N04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-122K07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-266B10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-118K19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-164H06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-537B04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-276H06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-529J14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-382P06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-361B10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-333F12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-382A16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-397C07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-075O14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-080G09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-350F03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-518G16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-390K10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-095M07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-338I04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-326G01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-169G16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-345L06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-489J11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-074I18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-537D18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-173B10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-305O03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-312H21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-510I22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-354O05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-316A07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-497F02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-170E05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-128G03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-544O05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-235O21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-134E10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-505A11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-328N24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-422H16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-546O11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-518C12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-344N03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-260K18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-346B16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-144A12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-033C13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-099J14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-061L03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-072N24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-089I07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-203P09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-037F04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-300K03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-204A02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-031H02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-269L04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-104N09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-142F17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-237A21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-140C10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-314A22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-239I02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-057A16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-278C09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-193M22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-151B24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-047I06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-176O04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-222F09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-049A08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-171A03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-205I02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-106B08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-333K14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-178B07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-333K18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-010P23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-014O05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-320N22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-094G04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-279C05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-289B06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-030E09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-104F24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-114K11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-157D01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-081D18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-124M08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-244D18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-188O24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-172M05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-021G06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-212I21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-268O18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-065A16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-150F16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-016A18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-275N06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-320B02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-054L12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-014O10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-341I13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-294L07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-150C04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-090A10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-282H11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-003B03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-102I17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-116P05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-128B05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-066P05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-275B22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-120A02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-237I12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-281C17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-162B16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-339C20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-225J23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-274B24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-194I04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-211G13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-080O22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-023C10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-349H07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-343N03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-326G09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-349H17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-113N24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-316M03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-159K02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-324K14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-067F02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-196N23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-063N13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-060A10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-137C17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-159E20
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-172M05.b	B6Ng01-172M05.g
ACC	GA001294	GA001295
length	1,161	1,114
definition	B6Ng01-172M05.b	B6Ng01-172M05.g
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(11,833,154 - 11,834,317)	(11,973,428 - 11,974,550)
sequence	gaattcctcccagaaaaataacatatccatttattcttaagtttcctaca ttttatctttcaattttttcaactgtttcatgggactcactgtacatttt ggacaaagtgaagccatgagttctttttatatgcatggttgatttgaaaa tgatgaaggctatttctgtgttgcaaaacttagttttgtaccaatgacag gtggttctcagaccattttcaattcacctagcaaaattatgtgagtcagt aactggacaccagtgtagcctacgggacagtgatttttgatatgagactt atttttctgtgaacgacattcgaaatgttggtctatttacctctattaaa caaagcatcagatattatgttttccccttatcctaactagcataatactg gatttacatttattatttaaaaattattattattatcatcattattttaa attgtatgctcatgtttgtgcttgtagttgagtgtgcagatgtgtgcagg tggctgaagaaggcacaggtattagatgtctctggagctggagttagagt tggttgtgagccacacagccacacagtgtcctggctactgcactcaactc aactcctcctgtgcagaagctgtacctgctgttaactggagctgtgtctc caattgtaatttccatctttttatgattatagtagtggtataaattgtat atcaatgttcctcttcttttctaaagcttatttcctttgtaggaaataaa ttattttatttgtaatacctggtaagttttatggataggggaaataaact tttttgtgtgttttattttacaaatttaatattcatctgaaaggatatca tttttctgtaggtcttcaaagaaaacttccgatgaaaaggaagaggtatg ggaaattaatttaaaatcatatttattagatacagcataaaggtcaaact aatacattataaagtgagttagaattatgggatccatcccataaacacca cctaaacccagtcactagcagatgccaacaagagcttgctgacagaagcc tgctgacagaagcctgatatatgtgtcttctgaaaggcatttcccagtgc ctggcaaataaaaagtgatgctcacagtatccattaaacagaagcacaag gtctccaatga	gaattctgtccttcttggtatagatacaaacccttccatctaaaagcatg ctttctaaatctaaactccactgcagatgtcctaaaatggaagaaatcaa gcaatgagatgtaatggaagacataattaattgtcctagagctagtgacc aaaatcacaatgaagcaggtcagtccttgaagacttgagtaatccctgag tgacagaagagaaacaagagcagcccaccaccccgccacatttgagggtt tagacacatcttactgtgtaccctagagatgtctcccaaaagctttgata tctccagagacaacttcagaaaggaatgatgactttgtaggtgaaccttg tatgaagctacctgcatccccgagaaatcactaaagctaaattctctaac ctgaacaatgcaatgagcccaagaggcccagtggcacacaaaataggagt ggagttattgcaccaaccacttcatcacttctacttcatgtcacatgaga tgaagtgatgagtgggtcccataacacgcttttagaagctgcttttacac tgagcattaactcctcccttgggctcagaaagtaaggacgtgcaaggtga gagcaggcatctctgccttcaatctctttccgtctcctttaccttgagtt gaactcctgcctaactctgcctaattatggtaaccactgaaggagtgtct gcctatctaatctatctcactccttttcaaggctacaggcatgaagataa gtcattgtcctaaacagtgagtctgcttgtattttggaaacagcaaggcc ttgtgggcaaatcatccatgtgatgaggctgcaccctaaagcagaagtgg tgtatcctcttaaacagtcagggcttggactaccttcaaggctgaagcag agacatgaccaaagaagccccctttgacatgacaccgctattccacatgc tttcttgttccaatcttctcttatttaagctaattctcatgtcagtaccc aagatgacttggggtcaatggacccctatgtgctcttccttcccacgagt cactttagtaatggaatctttatgagctacgtggcccagtcttgttctct gacgcttgtgttca
quality values	Open. Hide. 58 33 29 28 62 62 62 54 62 62 37 27 62 62 62 62 62 31 47 62 62 47 47 62 62 49 59 59 44 62 62 59 62 59 59 59 33 28 34 29 28 54 59 59 62 62 62 62 62 59 62 62 62 59 62 59 62 54 62 62 59 62 59 62 62 62 62 62 62 59 51 62 62 62 62 62 62 62 59 59 62 62 62 62 54 54 54 62 62 59 62 62 59 62 62 59 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 59 62 59 59 59 62 62 62 54 49 49 62 59 54 42 35 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 56 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 52 62 62 62 62 62 62 62 62 62 54 62 62 58 54 58 58 58 58 58 52 58 58 58 54 54 58 58 52 58 52 58 58 58 54 58 58 58 58 58 58 58 58 58 52 58 58 58 54 54 54 58 58 52 58 58 58 58 52 58 58 58 43 58 58 54 58 58 58 54 58 54 54 52 58 58 46 58 58 58 54 52 52 58 58 58 47 58 58 52 50 50 51 52 58 58 49 53 53 58 58 58 52 58 58 54 51 51 37 15 58 53 58 58 39 58 42 41 58 58 51 49 39 58 58 41 58 58 58 49 41 51 32 54 32 49 50 53 53 54 42 53 49 45 58 51 46 39 41 49 58 51 40 58 58 34 39 50 46 52 49 31 41 50 58 31 42 50 49 52 52 51 47 49 32 58 58 50 50 31 37 58 46 53 40 51 31 50 28 58 50 30 26 40 58 52 52 29 39 42 54 53 58 52 31 39 58 31 50 39 53 39 58 58 39 45 45 38 38 47 39 35 52 42 37 32 54 44 54 44 32 45 36 35 40 54 54 34 31 24 39 49 31 29 52 37 54 54 32 49 54 39 33 53 54 46 34 28 54 54 54 54 45 34 23 46 23 45 30 54 54 32 26 14 54 54 33 29 37 32 54 32 34 54 54 31 41 34 31 54 7 24 23 40 34 37 32 45 52 33 33 34 29 20 24 32 33 31 53 51 49 47 32 35 31 45 32 31 6 47 30 36 28 17 32 29 52 35 31 53 47 46 29 26 12 27 26 33 14 23 22 26 31 46 46 45 17 28 25 27 13 51 10 41 11 22 39 31 51 25 46 51 32 26 27 31 18 27 40 17 13 37 36 22 30 31 20 31 18 31 46 30 16 30 31 30 13 12 14 17 31 26 21 17 17 32 14 14 12 19 28 28 31 27 41 34 35 32 16 17 27 26 31 14 23 27 23 31 27 38 25 30 19 24 29 16 14 13 27 13 44 14 6 7 18 15 30 43 31 16 26 18 33 11 37 23 26 35 17 31 31 48 19 9 13 5 21 19 7 11 10 30 38 9 24 38 35 24 33 34 19 24 19 25 17 22 6 5 5 32 21 22 18 11 12 18 7 9 7 7 8 6 32 21 29 19 22 27 9 13 8 10 7 7 11 5 6 17 15 21 14 29 17 21 16 7 31 6 23 12 18 26 27 32 17 21 10 10 9 5 28 5 16 12 26 32 22 24 16 7 12 11 6 5 11 6 9 15 19 14 9 30 10 14 6 5 4 4 19 5 6 8 5 7 16 15 10 8 4 3 3 5 3 6 5 12 4 8 13 15 5 5 6 7 6 4 5 9 9 7 6 13 26 12 15 6 8 5 3 6 8 4 4 3 5 7 10 5 6 8 13 9 10 17 3 5 6 6 18	Open. Hide. 62 38 38 47 62 62 47 49 62 62 62 62 56 51 45 32 38 32 43 43 59 59 59 62 62 62 62 59 62 62 62 62 62 62 62 62 54 59 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 59 54 49 49 62 62 62 59 62 59 59 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 59 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 52 54 58 58 58 58 58 58 58 54 45 58 58 58 54 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 54 54 58 58 54 58 58 58 58 58 58 58 58 54 52 39 58 58 58 45 54 54 58 58 58 53 58 58 58 58 58 58 52 39 41 58 58 58 58 58 43 58 49 24 33 58 58 58 58 52 49 58 49 58 42 38 51 51 58 47 50 51 41 58 53 58 58 51 58 51 45 38 24 49 42 39 58 58 58 54 52 58 50 54 50 58 37 19 58 58 49 58 54 58 58 58 40 58 50 50 58 53 40 51 46 58 49 46 50 58 51 35 58 58 43 50 58 54 49 50 50 53 50 58 49 58 29 58 31 41 50 50 54 53 53 53 49 53 52 50 42 52 50 50 49 58 29 25 58 41 50 29 33 52 51 51 51 50 14 58 54 34 42 58 33 51 50 49 38 49 44 49 52 54 41 35 54 41 51 42 53 49 54 52 42 45 53 41 28 44 38 54 54 51 35 16 51 32 51 25 53 34 49 21 34 54 25 38 40 37 33 37 33 53 30 45 53 28 45 39 37 41 51 52 32 33 40 35 24 54 52 42 32 42 42 45 46 37 42 33 52 53 37 31 17 32 30 17 21 51 52 52 46 37 33 52 33 22 29 29 31 29 34 32 52 23 31 32 37 39 34 53 52 46 28 21 51 25 27 32 30 39 32 31 28 33 51 31 32 18 26 33 38 20 27 21 32 31 30 29 35 45 31 30 31 51 34 30 31 19 16 38 35 21 23 38 41 18 32 16 31 30 18 46 31 27 27 11 6 46 22 15 16 31 35 36 9 13 46 27 15 33 34 37 26 24 24 38 25 15 12 27 31 30 37 22 27 31 17 38 28 22 25 24 28 28 9 39 17 32 7 6 18 31 23 29 26 21 37 33 26 34 18 21 18 38 29 29 12 9 37 25 32 23 41 7 23 9 17 5 10 13 33 17 16 31 10 6 19 32 19 17 30 20 32 35 20 25 44 31 21 25 16 31 9 31 21 19 26 14 16 6 5 30 21 27 10 6 13 23 23 48 21 26 26 19 21 24 30 23 17 7 6 10 21 32 24 33 26 32 14 24 8 23 18 43 19 21 28 8 28 15 9 34 13 12 11 28 21 34 21 5 12 17 21 13 19 21 12 16 28 21 16 7 6 6 11 13 20 9 19 11 6 7 14 28 10 20 12 34 10 6 8 16 13 20 4 11 9 9 15 21 25 6 10 21 18 13 6 21 15 6 18 16 14 12 28 25 11 14 10 9 8 14 19 23 11 9 5 8 2 4 14 7 16 6 4 5 16 7 6 4 4 4 4 5 14 20 13 8 9 23 7 7 4 4 5 7 19 18 8

Alignment Information

BAC End 1

BAC End 2

seq1: chr2_11833154_11834317
seq2: B6Ng01-172M05.b_37_1197

seq1  GAATTCCTCCCAGAAAAATAACATATCCATTTATTCTTAAGTTTCCTACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTCCCAGAAAAATAACATATCCATTTATTCTTAAGTTTCCTACA  50

seq1  TTTTATCTTTCAATTTTTTCAACTGTTTCATGGGACTCACTGTACATTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATCTTTCAATTTTTTCAACTGTTTCATGGGACTCACTGTACATTTT  100

seq1  GGACAAAGTGAAGCCATGAGTTCTTTTTATATGCATGGTTGATTTGAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACAAAGTGAAGCCATGAGTTCTTTTTATATGCATGGTTGATTTGAAAA  150

seq1  TGATGAAGGCTATTTCTGTGTTGCAAAACTTAGTTTTGTACCAATGACAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGAAGGCTATTTCTGTGTTGCAAAACTTAGTTTTGTACCAATGACAG  200

seq1  GTGGTTCTCAGACCATTTTCAATTCACCTAGCAAAATTATGTGAGTCAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTTCTCAGACCATTTTCAATTCACCTAGCAAAATTATGTGAGTCAGT  250

seq1  AACTGGACACCAGTGTAGCCTACGGGACAGTGATTTTTGATATGAGACTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGGACACCAGTGTAGCCTACGGGACAGTGATTTTTGATATGAGACTT  300

seq1  ATTTTTCTGTGAACGACATTCGAAATGTTGGTCTATTTACCTCTATTAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTCTGTGAACGACATTCGAAATGTTGGTCTATTTACCTCTATTAAA  350

seq1  CAAAGCATCAGATATTATGTTTTCCCCTTATCCTAACTAGCATAATACTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGCATCAGATATTATGTTTTCCCCTTATCCTAACTAGCATAATACTG  400

seq1  GATTTACATTTATTATTTAAAAATTATTATTATTATCATCATTATTTTAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTACATTTATTATTTAAAAATTATTATTATTATCATCATTATTTTAA  450

seq1  ATTGTATGCTCATGTTTGTGCTTGTAGTTGAGTGTGCAGATGTGTGCAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTATGCTCATGTTTGTGCTTGTAGTTGAGTGTGCAGATGTGTGCAGG  500

seq1  TGGCTGAAGAAGGCACAGGTATTAGATGTCTCTGGAGCTGGAGTTAGAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTGAAGAAGGCACAGGTATTAGATGTCTCTGGAGCTGGAGTTAGAGT  550

seq1  TGGTTGTGAGCCACACAGCCACACAGTGTCCTGGCTACTGCACTCAACTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTGTGAGCCACACAGCCACACAGTGTCCTGGCTACTGCACTCAACTC  600

seq1  AACTCCTCCTGTGCAGAAGCTGTACCTGCTGTTAACTGGAGCTGTGTCTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCCTCCTGTGCAGAAGCTGTACCTGCTGTTAACTGGAGCTGTGTCTC  650

seq1  CAATTGTAATTTCCATCTTTTTATGATTATAGTAGTGGTATAAATTGTAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTGTAATTTCCATCTTTTTATGATTATAGTAGTGGTATAAATTGTAT  700

seq1  ATCAATGTTCCTCTTCTTTTCTAAAGCTTATTTCCTTTGTAGGAAATAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAATGTTCCTCTTCTTTTCTAAAGCTTATTTCCTTTGTAGGAAATAAA  750

seq1  TTATTTTATTTGTAATACCTGGTAAGTTTTATGGATAGGGGAAATAAACT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTATTTGTAATACCTGGTAAGTTTTATGGATAGGGGAAATAAACT  800

seq1  TTTTTGTGTGTTTTATTTTACAAATTTAATATTCATCTGAAAGGATATCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGTGTGTTTTATTTTACAAATTTAATATTCATCTGAAAGGATATCA  850

seq1  TTTTTCTGTAGGTCTTCAAAGAAAACTTCCGATGAAAAGGAAGAGGTATG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCTGTAGGTCTTCAAAGAAAACTTCCGATGAAAAGGAAGAGGTATG  900

seq1  GGAAATTAATTTAAAATCATATTTATTAAGATACAGCATAAAGGTCAAAC  950
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  GGAAATTAATTTAAAATCATATTTATT-AGATACAGCATAAAGGTCAAAC  949

seq1  TAATACATTATAAAGTGAGTTAGAAATATGGGATCCATCCCATAAACAAC  1000
      ||||||||||||||||||||||||| |||||||||||||||||||||| |
seq2  TAATACATTATAAAGTGAGTTAGAATTATGGGATCCATCCCATAAACACC  999

seq1  CACTAAACCCAGTCACTAGGCAGATGCCAACAAGAGCTTGCTGACAAGAG  1050
        |||||||||||||||| |||||||||||||||||||||||||||  ||
seq2  ACCTAAACCCAGTCACTA-GCAGATGCCAACAAGAGCTTGCTGACAGAAG  1048

seq1  CCTGCTGACAGGAGCCTGATATAGGTGTCTTCTGAGAGGCA-TTCCCAGT  1099
      ||||||||||| ||||||||||| ||||||||||| ||||| ||||||||
seq2  CCTGCTGACAGAAGCCTGATATATGTGTCTTCTGAAAGGCATTTCCCAGT  1098

seq1  GCCTGGCAAATAGAGAAGTGAATGCTCACAGTCATCCATTAGACAG-AGC  1148
      |||||||||||| | ||||| ||||||||||| |||||||| |||| |||
seq2  GCCTGGCAAATA-AAAAGTG-ATGCTCACAGT-ATCCATTAAACAGAAGC  1145

seq1  ACAAGGTCCCCAATGA  1164
      |||||||| |||||||
seq2  ACAAGGTCTCCAATGA  1161

seq1: chr2_11973428_11974550
seq2: B6Ng01-172M05.g_65_1178 (reverse)

seq1  TGAACAC-AGCGTCAGAG-ACAAGACTGGGCCACGTTAGCTCAATAAAGA  48
      ||||||| |||||||||| |||||||||||||||| |||||| |||||||
seq2  TGAACACAAGCGTCAGAGAACAAGACTGGGCCACG-TAGCTC-ATAAAGA  48

seq1  TTCCATTACTAAAAGTGACCTCGTGGG-AGGAGGAGCACATAGGGGGTCC  97
      |||||||||| ||||||| |||||||| |||| ||||||||| |||||||
seq2  TTCCATTACT-AAAGTGA-CTCGTGGGAAGGAAGAGCACATA-GGGGTCC  95

seq1  ATTGACCCCAAGTTCATCTTTGGGTACTGACATGAGATTTAGCTTTAAAT  147
      |||||||||||| ||||| |||||||||||||||||| ||||||| ||  
seq2  ATTGACCCCAAG-TCATC-TTGGGTACTGACATGAGAATTAGCTTAAATA  143

seq1  AGAGAAGAATTTGGAACAAGAAAGCATGTGG-ATAGCGGTGTTCATGGTC  196
      ||||||||  ||||||||||||||||||||| ||||||||| |||| |||
seq2  AGAGAAGA--TTGGAACAAGAAAGCATGTGGAATAGCGGTG-TCAT-GTC  189

seq1  AAAGGGGGCTTTCTTTGGTCATTGTCTCTGCTTCAGCCTTGAAGGTAGTC  246
      ||||||||| ||||||||||| ||||||||||||||||||||||||||||
seq2  AAAGGGGGC-TTCTTTGGTCA-TGTCTCTGCTTCAGCCTTGAAGGTAGTC  237

seq1  CAAGCCCTGACTGTTTAAGAGGATACACCACTTCTGCTTTAGGGTGCAGC  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCCCTGACTGTTTAAGAGGATACACCACTTCTGCTTTAGGGTGCAGC  287

seq1  CTCATCACATGGATGATTTGCCCACAAGGCCTTGCTGTTTCCAAAATACA  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATCACATGGATGATTTGCCCACAAGGCCTTGCTGTTTCCAAAATACA  337

seq1  AGCAGACTCACTGTTTAGGACAATGACTTATCTTCATGCCTGTAGCCTTG  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGACTCACTGTTTAGGACAATGACTTATCTTCATGCCTGTAGCCTTG  387

seq1  AAAAGGAGTGAGATAGATTAGATAGGCAGACACTCCTTCAGTGGTTACCA  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGGAGTGAGATAGATTAGATAGGCAGACACTCCTTCAGTGGTTACCA  437

seq1  TAATTAGGCAGAGTTAGGCAGGAGTTCAACTCAAGGTAAAGGAGACGGAA  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTAGGCAGAGTTAGGCAGGAGTTCAACTCAAGGTAAAGGAGACGGAA  487

seq1  AGAGATTGAAGGCAGAGATGCCTGCTCTCACCTTGCACGTCCTTACTTTC  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGATTGAAGGCAGAGATGCCTGCTCTCACCTTGCACGTCCTTACTTTC  537

seq1  TGAGCCCAAGGGAGGAGTTAATGCTCAGTGTAAAAGCAGCTTCTAAAAGC  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCCCAAGGGAGGAGTTAATGCTCAGTGTAAAAGCAGCTTCTAAAAGC  587

seq1  GTGTTATGGGACCCACTCATCACTTCATCTCATGTGACATGAAGTAGAAG  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTATGGGACCCACTCATCACTTCATCTCATGTGACATGAAGTAGAAG  637

seq1  TGATGAAGTGGTTGGTGCAATAACTCCACTCCTATTTTGTGTGCCACTGG  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGAAGTGGTTGGTGCAATAACTCCACTCCTATTTTGTGTGCCACTGG  687

seq1  GCCTCTTGGGCTCATTGCATTGTTCAGGTTAGAGAATTTAGCTTTAGTGA  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCTTGGGCTCATTGCATTGTTCAGGTTAGAGAATTTAGCTTTAGTGA  737

seq1  TTTCTCGGGGATGCAGGTAGCTTCATACAAGGTTCACCTACAAAGTCATC  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCGGGGATGCAGGTAGCTTCATACAAGGTTCACCTACAAAGTCATC  787

seq1  ATTCCTTTCTGAAGTTGTCTCTGGAGATATCAAAGCTTTTGGGAGACATC  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCTTTCTGAAGTTGTCTCTGGAGATATCAAAGCTTTTGGGAGACATC  837

seq1  TCTAGGGTACACAGTAAGATGTGTCTAAACCCTCAAATGTGGCGGGGTGG  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGGGTACACAGTAAGATGTGTCTAAACCCTCAAATGTGGCGGGGTGG  887

seq1  TGGGCTGCTCTTGTTTCTCTTCTGTCACTCAGGGATTACTCAAGTCTTCA  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCTGCTCTTGTTTCTCTTCTGTCACTCAGGGATTACTCAAGTCTTCA  937

seq1  AGGACTGACCTGCTTCATTGTGATTTTGGTCACTAGCTCTAGGACAATTA  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACTGACCTGCTTCATTGTGATTTTGGTCACTAGCTCTAGGACAATTA  987

seq1  ATTATGTCTTCCATTACATCTCATTGCTTGATTTCTTCCATTTTAGGACA  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATGTCTTCCATTACATCTCATTGCTTGATTTCTTCCATTTTAGGACA  1037

seq1  TCTGCAGTGGAGTTTAGATTTAGAAAGCATGCTTTTAGATGGAAGGGTTT  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCAGTGGAGTTTAGATTTAGAAAGCATGCTTTTAGATGGAAGGGTTT  1087

seq1  GTATCTATACCAAGAAGGACAGAATTC  1123
      |||||||||||||||||||||||||||
seq2  GTATCTATACCAAGAAGGACAGAATTC  1114

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information