BAC Information

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BAC

Clone NameB6Ng01-173H01
Chromosome2 (Build37)
Map Location 96,324,215 - 96,324,949
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100042843
Downstream geneLOC100043267, Lrrc4c
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-173H01.bB6Ng01-173H01.g
ACCGA001784GA001785
length7351,171
definitionB6Ng01-173H01.b B6Ng01-173H01.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatttgcaactaaatctgaagcatgcatttctcacagagcagtaa
acctgttttattccagatctatataattgaaatataaacaataattcatc
aagaaagcaaatagcaaatggtgataaagatgttaaagaagaaatatacc
ctcatgcattgttggagggaatgcaagttggttcaactgctatggggatc
tacacagagctttctccataactgaaaacttcactaatacgtgatgcgac
tattccactcatagttatacagctggacgattctgggagcagatcacaga
gatatgcgatgtcccaggtctactgctgcacatttgacaattgtcatcat
gtgaggcaatcctacatatgaatcaagaaataaatgagtaaagaaattgt
cacttagatatccagtgcaattttattaagatgttatgaagcctgaaatg
tcatttgagaggtcaatgcaactcaagagcattattttaactgaaatgag
tcacatgcagagaataaaaattggcaaagttgcatatgttctttcatatt
ttggatgtgtgtatatgtgtggtaaaagtagaaagtgaactttctggatt
gatgttgtttcatttagttgaggaatgtaaagataacaagagaggttaat
ggggtgaatatgaaaaacgacatgaagagtatgaactagggaagcagtgg
gggagtttgaggtagggtagctaggaggggttaga

gaattcagtactttttcagttcacgatggtagacatttcagctgatcttc
agtagaagacatactctttttattaaggcacttttttattagatattttc
ttcatttacatttcacatgctatccccaaagccccctataccttccctcc
accctggtccccaacccacccactcctgcttcctggccctggcattcccc
tgtactggggcatatgatcttcacaataccaagggcctctcctcccattg
atggccgactaggacatcctctgctatatatgcaactagagacacagcac
tgcagggtactggttagttcatattgttgttcctattctcttgaagaagt
agtctctaatgaaagtgaaggaatggacttattggcaaaatgaggagcaa
gcaggcaaagagatagagaaagcttctttcttccatgccctttctatagt
cttccagcagaagggatggtccagattaaaggtacaccttcccccatcaa
aaggtttggattagtgttcccactacaaaggtttatattaaaagtctatc
ttccaacttcaaatgattaaactaagaaaaaaagtccctcacaggtacgc
atatgcattgggttttagttaattcactccagatatagtcaagtttgcaa
cctagaatagccatcacagcagtagagaaaaggaataagggactgtgcag
taagtgacacgtcattgtgtagctaaggaggataaaaggattctgataga
aagcaaaggatacatgttgctttcttaaccacaaatgggatatatggaaa
gtttcaggggaagttgataggtttaattcatttgggtaaggcatattccc
acaagaactaaggttcactaaccttatgcacttaatggaagaagtttcgg
gctaacatgaaggaagaactcaagaaacagaagtcaaggcatttgggaag
caccatgacaaatacaacattctttttttaacagaggtcatcagaatgtt
tcatcaaggatcatatagttactgtgtcagtctgactcctttccaataga
gaagtgccatttgtgcttctttggtcattcgaattctttgagatgatcat
gtcaggattcttcatctaacgagaacatcgtcatgaaccacaagtctggg
ggccattaaccatttccatta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_96324215_96324949
seq2: B6Ng01-173H01.b_48_782

seq1  GAATTCATTTGCAACTAAATCTGAAGCATGCATTTCTCACAGAGCAGTAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTTGCAACTAAATCTGAAGCATGCATTTCTCACAGAGCAGTAA  50

seq1  ACCTGTTTTATTCCAGATCTATATAATTGAAATATAAACAATAATTCATC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGTTTTATTCCAGATCTATATAATTGAAATATAAACAATAATTCATC  100

seq1  AAGAAAGCAAATAGCAAATGGTGATAAAGATGTTAAAGAAGAAATATACC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAGCAAATAGCAAATGGTGATAAAGATGTTAAAGAAGAAATATACC  150

seq1  CTCATGCATTGTTGGAGGGAATGCAAGTTGGTTCAACTGCTATGGGGATC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATGCATTGTTGGAGGGAATGCAAGTTGGTTCAACTGCTATGGGGATC  200

seq1  TACACAGAGCTTTCTCCATAACTGAAAACTTCACTAATACGTGATGCGAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACAGAGCTTTCTCCATAACTGAAAACTTCACTAATACGTGATGCGAC  250

seq1  TATTCCACTCATAGTTATACAGCTGGACGATTCTGGGAGCAGATCACAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCCACTCATAGTTATACAGCTGGACGATTCTGGGAGCAGATCACAGA  300

seq1  GATATGCGATGTCCCAGGTCTACTGCTGCACATTTGACAATTGTCATCAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATGCGATGTCCCAGGTCTACTGCTGCACATTTGACAATTGTCATCAT  350

seq1  GTGAGGCAATCCTACATATGAATCAAGAAATAAATGAGTAAAGAAATTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGGCAATCCTACATATGAATCAAGAAATAAATGAGTAAAGAAATTGT  400

seq1  CACTTAGATATCCAGTGCAATTTTATTAAGATGTTATGAAGCCTGAAATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTAGATATCCAGTGCAATTTTATTAAGATGTTATGAAGCCTGAAATG  450

seq1  TCATTTGAGAGGTCAATGCAACTCAAGAGCATTATTTTAACTGAAATGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTGAGAGGTCAATGCAACTCAAGAGCATTATTTTAACTGAAATGAG  500

seq1  TCACATGCAGAGAATAAAAATTGGCAAAGTTGCATATGTTCTTTCATATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACATGCAGAGAATAAAAATTGGCAAAGTTGCATATGTTCTTTCATATT  550

seq1  TTGGATGTGTGTATATGTGTGGTAAAAGTAGAAAGTGAACTTTCTGGATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGATGTGTGTATATGTGTGGTAAAAGTAGAAAGTGAACTTTCTGGATT  600

seq1  GATGTTGTTTCATTTAGTTGAGGAATGTAAAGATAACAAGAGAGGTTAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTTGTTTCATTTAGTTGAGGAATGTAAAGATAACAAGAGAGGTTAAT  650

seq1  GGGGTGAATATGAAAAACGACATGAAGAGTATGAACTAGGGAAGCAGTGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGTGAATATGAAAAACGACATGAAGAGTATGAACTAGGGAAGCAGTGG  700

seq1  GGGAGTTTGAGGTAGGGTAGCTAGGAGGGGTTAGA  735
      |||||||||||||||||||||||||||||||||||
seq2  GGGAGTTTGAGGTAGGGTAGCTAGGAGGGGTTAGA  735


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