BAC Information

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BAC

Clone NameB6Ng01-173M01
Chromosome2 (Build37)
Map Location 86,548,002 - 86,549,195
singlet/doubletsinglet
Overlap genenone
Upstream geneOlfr1009, Olfr1010, Olfr1012, Olfr1013, Olfr1014, Olfr1015, Olfr1016, GA_x5J8B7W3KVV-518538-519236, Olfr1018, Olfr1019, Olfr1020, Olfr1021-ps1, Olfr1022, Olfr1023, Olfr1024, Olfr1025-ps1, Olfr1026, Olfr1027-ps1, Olfr1028, Olfr1029, Olfr1030, Olfr1031, Olfr1032, LOC100042075, Olfr1033, Olfr1034, Olfr1533-ps1, Olfr1035-ps1, Olfr1036, Olfr1037, LOC100041372, Olfr1038, Olfr1039, Olfr1040, GA_x5J8B7W3KVV-170014-170572, Olfr1042, Olfr1043, Olfr1044, Olfr52, Olfr1045, Olfr1046, Olfr1047, Olfr1048, Olfr1049, Olfr1050-ps1, Olfr1051, GA_x5J8B7W3KVV-25848-25992, Olfr1052, Olfr1053-ps1, Olfr1054, Olfr1055, Olfr1056, Olfr1057, GA_x5J8B7TRQ4E-1174-939, Olfr1058, Olfr1059-ps1, Olfr1515, Olfr1062, Olfr1063-ps1, Olfr1064-ps1, Olfr1065, Olfr1066, Olfr1069-ps1, Olfr1070-ps1, Olfr228, Olfr1073-ps1, Olfr1075-ps1, GA_x5J8B7W4CQV-104617-103730, Olfr1076, LOC625853, Olfr1078-ps1, GA_x5J8B7W4CQV-78329-78805, Olfr1079, Olfr1080, Olfr1081-ps1, Olfr1082, GA_x5J8B7W4CQV-18360-18784, Olfr1083, Olfr1084, Olfr1085, Olfr1086, Olfr1087, Olfr1088-ps1
Downstream geneOlfr1089, Olfr1090, Olfr1091-ps1, GA_x5J8B7W3Y5M-123838-124302, Olfr1093, Olfr141, Olfr1094, Olfr1095, Olfr1096-ps1, Olfr1097, Olfr1098, Olfr1099, Olfr1100, Olfr1101, Olfr1102, Olfr1103-ps1, Olfr1104, Olfr1105, Olfr1106, Olfr1107, GA_x5J8B7W3Y5M-419033-418135, Olfr1109, Olfr259, LOC668402, Olfr1110, Olfr1111, Olfr1112, LOC228238, Olfr1113, Olfr1114-ps1, LOC546767, Olfr1115, Olfr1521-ps1, LOC100041923, Olfr1117-ps1, GA_x5J8B7TY7N2-4-429, LOC668424, Olfr1118, Olfr1119-ps1, Olfr1120, Olfr1121, Olfr1122, LOC668432, Olfr1123, Olfr1125, Olfr1126, Pramel7, Pramel6, LOC668439, Olfr1127-ps1, Olfr253-ps1, Olfr1128, LOC100042038, LOC668445, LOC668447, Olfr1129, Olfr1130, Olfr1131, Olfr1132, LOC100042076, Olfr1133, Olfr1134, Olfr1135, Olfr1136
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-173M01.bB6Ng01-173M01.g
ACCGA002017GA002018
length1,1581,211
definitionB6Ng01-173M01.b B6Ng01-173M01.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctatagtgagatagaactgagataaaagtacataatgaagattt
attaatttttatgtattgactggaacagatagcaaaagataagtcatgct
accagttgatttctgaaatactgattaaaacaacaaaaaacagaaaagaa
gataactggaattttgatagacataactgcaaatatatcttttttttttt
ttttgtctaacataactgtaattgttgtttctggggctcactgcctcgat
cttctaacctaggccagtcctgaaagcttctatctagactttggacaatc
taatctaggtgtagaatgtttagagcctctgaggtttactgctgaggaaa
ctcaccctttcttgtttttctgaactttagctggctggctcccctaagct
cttctggctcaaaatcctctccactgactgattaaatctgtcttctctct
tagcctctcctcaattgctctgtttggcctcatactaactttggtaacat
gttctaatcttctggatggttctcattccctgccttctctcatcacctgt
atttagattgttcttcctctgctacctgtctctctataactttctaggta
agatggcctcccattttctaggtaaggctggctccccctgcacagccctt
agagtagcttccccttcctctctcttctcatgagttgggtaaattctatt
ctatcaaaacgttcgttgatttgtgtgcctgccactcaattagacatcac
cttcaaacatggatgtattcttttctacattataaatatataagcatact
tatatatttataatatagcttttgtctccagcaagtctcttgccccttcc
acagttggtcatcctatttcccctcccccatttctgagaggatgctcctc
caaaaccaggctaagaatgaggacatcatgagttttgcagcacatgggac
agactagaaaatatcatcctgagtagttactcagacccaaagatattgca
tgtatttgtcagtgataagtggaaatacccaaagtacagatactaggaat
cacccacggatttagactttaccagccgaaagccaagtgatatctcattc
ttacttagattgggagaatatcctggaaggccaagaatgtggaatttggt
ggccattg
gaattcaagtaggcagtaaccaaaatagtgaataaagctttctttgagat
ttcaaaaacttttaaaaatatcaattgaaatatctaaaccatttatttac
caaatatatagatggtaattttgtacattaaattcagtcatttctgttgc
ttttatatacttatacaggtcttgacaaaatctttagggaatgtacatta
gaaaataggcttaattatattctcgatcatcaattgagcctaaaaaagag
aattacctacccgattttgttttttaataaaactttttttggacttattt
gacaattagtgattctaaacatctttctctaaatggcatgaatattttct
ctaaagaatttttttaaaaaaaagtacattcagttccttggctatttatt
tattcatatttgtttattactttaattatattaagtaatttctattttta
ttacctccaatttatcgaagggcatatgtaatttacaattattagaaatt
aaaaatactattagcttattgatatatgtttgctctcttacttggtttgg
aattttcacgatctcatgagaatacaaagttaagactaggccaagattta
gtgaatgcttttcagtatttcattaaaaaaaaattttttttttggctttt
tgagacagggtttctctgtgttgccctggctgtcctgaatctctctttgt
agatcaggctggccttgagctcagaaatctgcctgtctctgcctcccaag
tggtgggattaaaagcgtgtaccaccaccgcccggcttaaaaaatagttt
tactattttaaatgtgtgtgtgtgtgtgtgtgtttgctgatatttgaaac
agttctgaggctttagatattctcaaatataggctttataggcaattatg
aactgctcaaaattgagtggttactaaccaaaagcactatagatgcttaa
ggtactgagctatctttcccctccccacattagaggtttttatataacaa
accacttggtatactttgtagttgagtaatatgggaaacatgttgagctg
accatacgatactttcagaaaatagaatacttaattgttattcatgaaca
tgattttccaattgttgcccaggtgagtacttcacctcttatatggtaat
gcctacgtactgccttggcttatatattgagacacgtctgtaagaaatcg
tgcatagcttc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_86548002_86549195
seq2: B6Ng01-173M01.g_63_1273

seq1  GAATTCAAGTAGGCAGTAACCAAAATAGTGAATAAAGCTTTCTTTGAGAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGTAGGCAGTAACCAAAATAGTGAATAAAGCTTTCTTTGAGAT  50

seq1  TTCAAAAACTTTTAAAAATATCAATTGAAATATCTAAACCATTTATTTAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAAAACTTTTAAAAATATCAATTGAAATATCTAAACCATTTATTTAC  100

seq1  CAAATATATAGATGGTAATTTTGTACATTAAATTCAGTCATTTCTGTTGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATATATAGATGGTAATTTTGTACATTAAATTCAGTCATTTCTGTTGC  150

seq1  TTTTATATACTTATACAGGTCTTGACAAAATCTTTAGGGAATGTACATTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATATACTTATACAGGTCTTGACAAAATCTTTAGGGAATGTACATTA  200

seq1  GAAAATAGGCTTAATTATATTCTCGATCATCAATTGAGCCTAAAAAAGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATAGGCTTAATTATATTCTCGATCATCAATTGAGCCTAAAAAAGAG  250

seq1  AATTACCTACCCGATTTTGTTTTTTAATAAAACTTTTTTTGGACTTATTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTACCTACCCGATTTTGTTTTTTAATAAAACTTTTTTTGGACTTATTT  300

seq1  GACAATTAGTGATTCTAAACATCTTTCTCTAAATGGCATGAATATTTTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAATTAGTGATTCTAAACATCTTTCTCTAAATGGCATGAATATTTTCT  350

seq1  CTAAAGAATTTTTTTAAAAAAAAGTACATTCAGTTCCTTGGCTATTTATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAGAATTTTTTTAAAAAAAAGTACATTCAGTTCCTTGGCTATTTATT  400

seq1  TATTCATATTTGTTTATTACTTTAATTATATTAAGTAATTTCTATTTTTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCATATTTGTTTATTACTTTAATTATATTAAGTAATTTCTATTTTTA  450

seq1  TTACCTCCAATTTATCGAAGGGCATATGTAATTTACAATTATTAGAAATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCTCCAATTTATCGAAGGGCATATGTAATTTACAATTATTAGAAATT  500

seq1  AAAAATACTATTAGCTTATTGATATATGTTTGCTCTCTTACTTGGTTTGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATACTATTAGCTTATTGATATATGTTTGCTCTCTTACTTGGTTTGG  550

seq1  AATTTTCACGATCTCATGAGAATACAAAGTTAAGACTAGGCCAAGATTTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTCACGATCTCATGAGAATACAAAGTTAAGACTAGGCCAAGATTTA  600

seq1  GTGAATGCTTTTCAGTATTTCATTAAAAAAAAATTTTTTTTTTGGCTTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAATGCTTTTCAGTATTTCATTAAAAAAAAATTTTTTTTTTGGCTTTT  650

seq1  TGAGACAGGGTTTCTCTGTGTTGCCCTGGCTGTCCTGAATCTCTCTTTGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGACAGGGTTTCTCTGTGTTGCCCTGGCTGTCCTGAATCTCTCTTTGT  700

seq1  AGATCAGGCTGGCCTTGAGCTCAGAAATCTGCCTGTCTCTGCCTCCCAAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCAGGCTGGCCTTGAGCTCAGAAATCTGCCTGTCTCTGCCTCCCAAG  750

seq1  TGGTGGGATTAAAAGCGTGTACCACCACCGCCCGGCTTAAAAAATAGTTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGGGATTAAAAGCGTGTACCACCACCGCCCGGCTTAAAAAATAGTTT  800

seq1  TACTATTTTAAATGTGTGTGTGTGTGTGTGTGTTTGCTGATATTTGAAAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTATTTTAAATGTGTGTGTGTGTGTGTGTGTTTGCTGATATTTGAAAC  850

seq1  AG-TCTGAGGCTTTAGATATTCTCAAATATAGGC-TTATAGGCAATTATG  898
      || ||||||||||||||||||||||||||||||| |||||||||||||||
seq2  AGTTCTGAGGCTTTAGATATTCTCAAATATAGGCTTTATAGGCAATTATG  900

seq1  AACTGCTCAAAA-TGAGTGGTTACTA--CAAAAGCACTATAGATGCTTAA  945
      |||||||||||| |||||||||||||  ||||||||||||||||||||||
seq2  AACTGCTCAAAATTGAGTGGTTACTAACCAAAAGCACTATAGATGCTTAA  950

seq1  -GTACTGAGCTATCTTTCCC--TCCCACA-TAGA-GTTTTTATATAACAA  990
       |||||||||||||||||||   |||||| |||| |||||||||||||||
seq2  GGTACTGAGCTATCTTTCCCCTCCCCACATTAGAGGTTTTTATATAACAA  1000

seq1  A-CACTTGGTATAC-TTGTAGTTGAGTATTAATGGAAACATG-TGAGCTG  1037
      | |||||||||||| ||||||||||||| ||  ||||||||| |||||||
seq2  ACCACTTGGTATACTTTGTAGTTGAGTAATATGGGAAACATGTTGAGCTG  1050

seq1  ACAATAAGGATAC-TTCAGAAAATAG-ATACT--ATATGTATCAATGAAC  1083
      || || | ||||| |||||||||||| |||||  ||   |||  ||||||
seq2  ACCAT-ACGATACTTTCAGAAAATAGAATACTTAATTGTTATTCATGAAC  1099

seq1  ATGA-TTTCAAATTGTTGGTCA-GTGAGTACCTTTAAACCTCTTTAAATG  1131
      |||| |||| ||||||||  || ||||||||   |  |||||||  |  |
seq2  ATGATTTTCCAATTGTTGCCCAGGTGAGTAC---TTCACCTCTTATATGG  1146

seq1  TATAGCCTACAGTCACTGCTCTTGG-TTAT-TATTTAGAACACTGTTGTA  1179
      ||  |||||| || ||||| ||||| |||| |||| || ||||   ||||
seq2  TAATGCCTAC-GT-ACTGC-CTTGGCTTATATATTGAG-ACACGTCTGTA  1192

seq1  AGAA----TGCATAGCTTC  1194
      ||||    |||||||||||
seq2  AGAAATCGTGCATAGCTTC  1211