BAC Information

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BAC

Clone NameB6Ng01-174G17
Chromosome2 (Build37)
Map Location 83,224,650 - 83,225,782
singlet/doubletsinglet
Overlap genenone
Upstream geneA130030D18Rik, EG624362, LOC433550, LOC269292, LOC433440, Fsip2, LOC545429
Downstream genePpia-ps2_981.1, LOC100040818, LOC668077, Zc3h15, Itgav, Dnmt3l-ps1, D430039N05Rik, Zswim2, LOC668096, LOC668100, LOC545432, LOC668107, LOC668113, LOC668115, LOC668119, LOC383725, Calcrl
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-174G17.bB6Ng01-174G17.g
ACCGA002506GA002507
length1,2031,131
definitionB6Ng01-174G17.b B6Ng01-174G17.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctaccagactttcaaagagaagctaataccaagattccttgaact
attccataaaatagaaacagaaggaacactgccacaaagcattctatgag
attgtagtcactctgatgcctaaaccacaaaaggactcaacaagagaaag
aattttagattaaatcccttatgaacattgatgtaaaaaaaaaaacgtat
taaaatacttgcaaactgaatccaagcacacatcaaaaaccataaacgag
taggcttcccatcagagatggatgaatggttcaatatatgaaaatccatt
aatgcaatccaccatatgaacaaactgaaagaaaaaacgcatgatcatct
tattagatgctgaagacttgaacaaaatccaaaaccccttcatggtaaaa
gtcatggagagaatgggatacaaagcatatacctaaacttcataaaggca
acattcagaaaactgatagtcaacataaaattaaatggagagaaactaaa
agcaattgtactatcagagaaagacaatgctgcccattctttccctatat
attgaatacagtatttgaagctctagctagagcagtaagataattaaaag
agacaaaggtgatacaaactagaaagaaagaagtcaaagtattgctattt
acagatgatataatagtatgtattagtgacccccaaaattctaccagaga
cttcctacagctgataaaaccttcagtaaaatggctggatataaatttaa
ctcaaaagatcagtagtcctttattcatacaaacaataagcaagctgaga
aagaaattagggaaacaacacccttcataataatcatgaataatataaag
tatcttggtgtaattttaaccaagcaagagaaagatgtatataacaagaa
attcaaatcggaagatattagataaaaatggagcaaagattggggggaat
agctcaccaattactgggctaactagagatccacccccatggggagaaaa
ccaacctctgatactattagtggaatactttgattatgctttcagacagg
acttcattcagcagcagtggaaacaggataaagagggcccacagcacatt
ataagcagagcctcagaagtcctgtcagtctagggtggagttgaagtgag
actggaggttcaagatactcaaggaacctacggaaacccactcaacctgt
ggc
gaattcttaggctcaacaaccataggggcaaaaaaggacctttataaaga
aattcatacagtgatatgaaagaggaaaaaactaaaaaagaatgtaaaat
aagaaaatcaatctttatcttatttaaaacacattcaatatttagttaat
tataaccacatctagttataattaactagttggatataattaaaatatac
tatcactgtctctgatcaacatagaaggataaataatcagggaaacaatt
ctttgaataagcatagtcttcctttcttgatgtaaagacgtttgaagtta
cagaaattaaagatgtctttgaggctggggagatatctcagtgacagagt
agttgcctaatatgtgtgaggcattgagttcaattctgagtacaactatg
actttttattagttatgtatttattcttcaagagttttgtacatacatat
gaaatattttcatatttactctttactcccattctaaccctttcctggac
ctacattttgctccataaagagtttaaaggtgtttaaaaataaaaatcca
gaggctcacccagtcacctcttttctgcttatgttttcatacttggtatg
aggatcttagtttgtataataagcacccatgtaagaaccaggtgaggaag
gacacatctgtatcctcagggctggggttcaaacagatagatccccaagc
ttgctgattagctagttgagacaatctaggattgtggagtttagggagat
agtctgtccttaagataaaggcaatgactgagaaaaacatccaacctaca
ttctctacctccacgtgtaggtgcccacatttacatatgtacctgcaatt
ttcatgtgcagctacacaaacttttgtacacttgtgcatatacacacacg
gacacacagaccggaccacacggacggacggacagacccaccccgcacac
ggcacacgcacatgcataatgatctttacttcttttagaaggatgaaggt
atgtgttgcaccatagtaactttaaggaattgcagaagttattcagtaat
ttcctttgaattaaaaagactttcattaattatttaatagtattagaaaa
tatggaaacaatttaaaaagtacgagcttag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_83224650_83225782
seq2: B6Ng01-174G17.g_68_1198 (reverse)

seq1  CTAAGCTCTTACTTTTTATATT-TTTCTATA-TTTCTTATACCTATTAAA  48
      |||||||| ||||||||| ||| |||| ||| ||||| ||| ||||||||
seq2  CTAAGCTCGTACTTTTTAAATTGTTTCCATATTTTCTAATA-CTATTAAA  49

seq1  TATATAATG-AAGT-TTTTTATATCAAAGGAAAATAACTGAATAAC-TCT  95
      ||  ||||| |||| ||||||  ||||||| |||| |||||||||| |||
seq2  TAATTAATGAAAGTCTTTTTAATTCAAAGG-AAATTACTGAATAACTTCT  98

seq1  GCAATTTCCTTAAAGTTACTATGGTGCAACACATACC-TCATCCTTCT-A  143
      |||| |||||||||||||||||||||||||||||||| |||||||||| |
seq2  GCAA-TTCCTTAAAGTTACTATGGTGCAACACATACCTTCATCCTTCTAA  147

seq1  AAGAAGTAAAGATCA-TATGCATGTGCGTGTG-CGTGTGCGTGTGTGTGT  191
      ||||||||||||||| |||||||||||||||| ||||||||     | ||
seq2  AAGAAGTAAAGATCATTATGCATGTGCGTGTGCCGTGTGCG-----GGGT  192

seq1  GTGTCTGTCTGTCTGTCTGTGTGTGTCTGTGTCTGTGTGTCTGTGTGTGT  241
      | ||||||| ||| ||| ||||| ||| | ||||||||||| ||||||| 
seq2  GGGTCTGTCCGTCCGTCCGTGTG-GTCCG-GTCTGTGTGTCCGTGTGTG-  239

seq1  TATATGCACAAGTGTACAAAAGTTTGTGTAGCTGCACATGAAAATTGCAG  291
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATGCACAAGTGTACAAAAGTTTGTGTAGCTGCACATGAAAATTGCAG  289

seq1  GTACATATGTAAATGTGGGCACCTACACGTGGAGGTAGAGAATGTAGGTT  341
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACATATGTAAATGTGGGCACCTACACGTGGAGGTAGAGAATGTAGGTT  339

seq1  GGATGTTTTTCTCAGTCATTGCCTTTATCTTAAGGACAGACTATCTCCCT  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGTTTTTCTCAGTCATTGCCTTTATCTTAAGGACAGACTATCTCCCT  389

seq1  AAACTCCACAATCCTAGATTGTCTCAACTAGCTAATCAGCAAGCTTGGGG  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTCCACAATCCTAGATTGTCTCAACTAGCTAATCAGCAAGCTTGGGG  439

seq1  ATCTATCTGTTTGAACCCCAGCCCTGAGGATACAGATGTGTCCTTCCTCA  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTATCTGTTTGAACCCCAGCCCTGAGGATACAGATGTGTCCTTCCTCA  489

seq1  CCTGGTTCTTACATGGGTGCTTATTATACAAACTAAGATCCTCATACCAA  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGTTCTTACATGGGTGCTTATTATACAAACTAAGATCCTCATACCAA  539

seq1  GTATGAAAACATAAGCAGAAAAGAGGTGACTGGGTGAGCCTCTGGATTTT  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGAAAACATAAGCAGAAAAGAGGTGACTGGGTGAGCCTCTGGATTTT  589

seq1  TATTTTTAAACACCTTTAAACTCTTTATGGAGCAAAATGTAGGTCCAGGA  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTTAAACACCTTTAAACTCTTTATGGAGCAAAATGTAGGTCCAGGA  639

seq1  AAGGGTTAGAATGGGAGTAAAGAGTAAATATGAAAATATTTCATATGTAT  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGTTAGAATGGGAGTAAAGAGTAAATATGAAAATATTTCATATGTAT  689

seq1  GTACAAAACTCTTGAAGAATAAATACATAACTAATAAAAAGTCATAGTTG  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACAAAACTCTTGAAGAATAAATACATAACTAATAAAAAGTCATAGTTG  739

seq1  TACTCAGAATTGAACTCAATGCCTCACACATATTAGGCAACTACTCTGTC  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCAGAATTGAACTCAATGCCTCACACATATTAGGCAACTACTCTGTC  789

seq1  ACTGAGATATCTCCCCAGCCTCAAAGACATCTTTAATTTCTGTAACTTCA  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAGATATCTCCCCAGCCTCAAAGACATCTTTAATTTCTGTAACTTCA  839

seq1  AACGTCTTTACATCAAGAAAGGAAGACTATGCTTATTCAAAGAATTGTTT  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACGTCTTTACATCAAGAAAGGAAGACTATGCTTATTCAAAGAATTGTTT  889

seq1  CCCTGATTATTTATCCTTCTATGTTGATCAGAGACAGTGATAGTATATTT  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGATTATTTATCCTTCTATGTTGATCAGAGACAGTGATAGTATATTT  939

seq1  TAATTATATCCAACTAGTTAATTATAACTAGATGTGGTTATAATTAACTA  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTATATCCAACTAGTTAATTATAACTAGATGTGGTTATAATTAACTA  989

seq1  AATATTGAATGTGTTTTAAATAAGATAAAGATTGATTTTCTTATTTTACA  1041
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTGAATGTGTTTTAAATAAGATAAAGATTGATTTTCTTATTTTACA  1039

seq1  TTCTTTTTTAGTTTTTTCCTCTTTCATATCACTGTATGAATTTCTTTATA  1091
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTTTTAGTTTTTTCCTCTTTCATATCACTGTATGAATTTCTTTATA  1089

seq1  AAGGTCCTTTTTTGCCCCTATGGTTGTTGAGCCTAAGAATTC  1133
      ||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTCCTTTTTTGCCCCTATGGTTGTTGAGCCTAAGAATTC  1131