BAC Information

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BAC

Clone NameB6Ng01-174L07
Chromosome2 (Build37)
Map Location 66,976,368 - 66,977,311
singlet/doubletsinglet
Overlap genenone
Upstream geneTtc21b, Scn1a, LOC100039486, LOC383706, Scn9a, Scn7a, LOC383707, LOC100039540
Downstream geneGm1322, Cmya3, LOC621171, LOC227995, B3galt1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-174L07.bB6Ng01-174L07.g
ACCGA002707GA002708
length958777
definitionB6Ng01-174L07.b B6Ng01-174L07.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttgggtttatcaacctatttaccttttccctattaaataaaaca
aatcaagggtttttttgttttttgttttttgtttttttctgggtctccaa
atgcttttctctatttcaataatttattcaatcagaatggatttgttttc
caaatcttaactttgtaagacatgttatattccaattagttactaaagcc
acataaacaatatagagagattctctcttgcaaatttcaaaaattcgagt
tttcagctcgaatgcttgaaaatgctactctcaggtttcaagccaagatg
aacaagggctgtaaaggccagctcatcttgtgctcttactgatgttgctg
ctctgttcttacagataaaacttctactttaattagataaactctgtgaa
ttataactgctgtcccaaccttagtcagattagacactcgttttgattgt
ttggtatccttctccctctcatttcatatttgtttcttttctataatcca
gtgtcatcttttctttcttcacacattcctactcctttttccttgcaaat
caagataagtttgtacaatatatcctaagactgtgttagtgtgtgtccgt
gtctgtgtctgtgtaatatatatatattacttatatatatatatatatat
tctaaagggataaatgaagtttgattattatttaaattattttgcttatt
gttttttttccccagtcgataacccatgaaagatcagggatataaaaatt
taatttaaaatatattcagaattttaacacgaatatcaaattaaattatt
tttcatgtattaagcagtttatatttataaatttttaattatatcatgaa
atcagaagtttttgtttgttgttgttgttccttgaggtttctcattttgt
tttcatatatcagctcagtaaaatgaagatatcacttttctggatcctgg
acagttta

gaattctctgtttagctctgtaccccattttcaatagggtttttcagttt
gttggaggtctaacttcttaagttctttatatattttggatattagccct
ctgtcacatgtagagttaatgaagatcttttcctaatctgtaagttgcct
ttttgtcctttgacatggtcctttgccttacagaagcttttcagtttcac
gaggttctgttattaatttttgatcatcgagcctgagaaattggtattct
gttcaggaaattgtctcctgtaccaatgtggtcaaggatttttcccactt
ttgcttctattagatttaggttatccagttttatagtgaggtccttcatc
cacttggacttgagttttgtgttgggtgataaatatggatcagttttcat
tctttttcatgcagacatctagttagaccatcaccgtttgttgaagatgc
tttctgttttccattgtacagttctggcttagctgtcaaaaatcacatgg
tcttaagtgtatgagtttatttctgggttttcattcttttatcagtcaac
atgtctgtctctgtaccaataacatgtggtttttatgactatttctctga
agtacagcttgagatcagtaacggtgattccttcatgagttcttttattg
tagagtattgttttggttatcctagagttttgggtttttttgcttttttt
tttttttttgtttttccatgtgatgttgagaattgatcttttaagttctg
taaaaccaaaaaaaaaagtgttggaat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_66976368_66977311
seq2: B6Ng01-174L07.b_49_1005 (reverse)

seq1  AAACTGT-CAGGATCAAG-AAAGTTATATCTACA-TTTACTGAGCCTGAT  47
      ||||||| ||||||| || ||||| |||||| || ||||||||| |||||
seq2  AAACTGTCCAGGATCCAGAAAAGTGATATCTTCATTTTACTGAG-CTGAT  49

seq1  ATATGAAAAC-AAATGAGAAACTACAA-GAACAACAACAAC-AACAAAAA  94
      |||||||||| |||||||||||  ||| ||||||||||||| ||||||||
seq2  ATATGAAAACAAAATGAGAAACCTCAAGGAACAACAACAACAAACAAAAA  99

seq1  CTTCTGATTTCATGATATA--TTAAAATTTATAAATATAAACTGCTTAAT  142
      |||||||||||||||||||  | |||||||||||||||||||||||||||
seq2  CTTCTGATTTCATGATATAATTAAAAATTTATAAATATAAACTGCTTAAT  149

seq1  ACATG-AAAATAATTTAATTTGATATTCGTGTT-AAATTCTGAATATATT  190
      ||||| ||||||||||||||||||||||||||| ||||||||||||||||
seq2  ACATGAAAAATAATTTAATTTGATATTCGTGTTAAAATTCTGAATATATT  199

seq1  TTAAATT-AATTTTTATATCCCTGATCTTTCATGGGTTATCGACTGGG--  237
      ||||||| ||||||||||||||||||||||||||||||||||||||||  
seq2  TTAAATTAAATTTTTATATCCCTGATCTTTCATGGGTTATCGACTGGGGA  249

seq1  AAAAAAACAATAAGCAAAATAATTTAAATAATAATC-AACTTCATTTATC  286
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  AAAAAAACAATAAGCAAAATAATTTAAATAATAATCAAACTTCATTTATC  299

seq1  CCTTTAGAATATATATATATATATATAAGTAATATATATATATTACACAG  336
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTAGAATATATATATATATATATAAGTAATATATATATATTACACAG  349

seq1  ACACAGACACGGACACACACTAACACAGTCTTAGGATATATTGTACAAAC  386
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGACACGGACACACACTAACACAGTCTTAGGATATATTGTACAAAC  399

seq1  TTATCTTGATTTGCAAGGAAAAAGGAGTAGGAATGTGTGAAGAAAGAAAA  436
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCTTGATTTGCAAGGAAAAAGGAGTAGGAATGTGTGAAGAAAGAAAA  449

seq1  GATGACACTGGATTATAGAAAAGAAACAAATATGAAATGAGAGGGAGAAG  486
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGACACTGGATTATAGAAAAGAAACAAATATGAAATGAGAGGGAGAAG  499

seq1  GATACCAAACAATCAAAACGAGTGTCTAATCTGACTAAGGTTGGGACAGC  536
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATACCAAACAATCAAAACGAGTGTCTAATCTGACTAAGGTTGGGACAGC  549

seq1  AGTTATAATTCACAGAGTTTATCTAATTAAAGTAGAAGTTTTATCTGTAA  586
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTATAATTCACAGAGTTTATCTAATTAAAGTAGAAGTTTTATCTGTAA  599

seq1  GAACAGAGCAGCAACATCAGTAAGAGCACAAGATGAGCTGGCCTTTACAG  636
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACAGAGCAGCAACATCAGTAAGAGCACAAGATGAGCTGGCCTTTACAG  649

seq1  CCCTTGTTCATCTTGGCTTGAAACCTGAGAGTAGCATTTTCAAGCATTCG  686
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTGTTCATCTTGGCTTGAAACCTGAGAGTAGCATTTTCAAGCATTCG  699

seq1  AGCTGAAAACTCGAATTTTTGAAATTTGCAAGAGAGAATCTCTCTATATT  736
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGAAAACTCGAATTTTTGAAATTTGCAAGAGAGAATCTCTCTATATT  749

seq1  GTTTATGTGGCTTTAGTAACTAATTGGAATATAACATGTCTTACAAAGTT  786
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTATGTGGCTTTAGTAACTAATTGGAATATAACATGTCTTACAAAGTT  799

seq1  AAGATTTGGAAAACAAATCCATTCTGATTGAATAAATTATTGAAATAGAG  836
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATTTGGAAAACAAATCCATTCTGATTGAATAAATTATTGAAATAGAG  849

seq1  AAAAGCATTTGGAGACCCAGAAAAAAACAAAAAACAAAAAACAAAAAAAC  886
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGCATTTGGAGACCCAGAAAAAAACAAAAAACAAAAAACAAAAAAAC  899

seq1  CCTTGATTTGTTTTATTTCATAGGGAAAAGGTAAATAGGTTGATAAACCC  936
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  CCTTGATTTGTTTTATTTAATAGGGAAAAGGTAAATAGGTTGATAAACCC  949

seq1  AAGAATTC  944
      ||||||||
seq2  AAGAATTC  957


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