BAC Information

Click to search

BAC

Clone NameB6Ng01-174P06
ChromosomeX (Build37)2 (Build37)
Map Location 133,025,875 - 133,026,583146,722,093 - 146,722,830
singlet/doubletsingletsinglet
Overlap geneLOC100041079
Upstream geneAV320801, EG621467, Nxf7, 4930534P07Rik, 1700008I05Rik, 1700129I15Rik, Gprasp1, Gprasp2, Bhlhb9, LOC100041110, 2900062L11Rik, 6530401D17Rik, Bex2, Nxf3, Bex4, Tceal8, Tceal5, Bex1, LOC100040972, Wbp5, Ngfrap1, LOC666180, LOC237048, LOC666196, Kir3dl2
Downstream geneKir3dl1, Tceal3, Tceal1, Morf4l2, BC065397, Glra4, LOC100041122, Plp1, Rab9b, 1700014N06Rik, LOC621984, LOC100034363, 4930488E11Rik, LOC666244, 2810402A17Rik, Zcchc18, BC031748, LOC666277, LOC436231, LOC666288, LOC100041260, LOC100041272, LOC669737, Esx1, EG666303
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-174P06.bB6Ng01-174P06.g
ACCGA002889GA002890
length710737
definitionB6Ng01-174P06.b B6Ng01-174P06.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(133,025,875 - 133,026,583)(146,722,093 - 146,722,830)
sequence
gaattcagaacttttcagctggggaacgagagtaccagtatgttagcttt
acgaggtacgcctggccttgaactttctaaggaaattcgagacagtctat
cagaagtaaagtggaaaatagctttataagatatgtttggccttgaactt
tctctagtgttagaagcccttttgttccttttcacatgttatcaagtggt
taaggcagggcggattctagatgaagttcaggacaatctatcagaagtaa
agcggggagagagagtaggagcaaagagaaaatatggtacacaaaataaa
catacaggcctttccaagggtcttgaacccgaggaaaagtttaggtcagg
taaaaatacctggggagagattagaaggaaggagaaggaaaaagaaaaga
aaaaagatcaattagaaaagccagttcttagtagttctgaatcagatgaa
aaggctattagggcctggaaggcgctctcccgagcaggtgaagccactgg
acaataatgacagaggcaggctcttgcagcctacaaggtcttattgtcca
ccctagagttgtagatcaagattataaaggggaacttcaggttctctgtt
cttgtcctttaagttgtcttttctatatcacaaagagacagaatagctca
actaataattttgccaagcctacatggctgttttttcttcctctggtaat
tcctagagct
gaattcatggatgtggaccttgggtgagattgcagccccagcagacaact
taatttcaggctggtgtgtcttgagcaaagggcctcagtcacccatatca
agatcctgatctgtagaaactgtgagctaataaatttgccttaggtgcca
gagttgtgatttgctacacagcagtatacggtaaatataagaattggaag
cgagatttgcatctctgcaaggattgtatgagcagaagcacctgtccata
atggcagtgagaaggttgagtcgtacgtgtaggcttcagtgtgagagcac
atagagacaatgaatatagttgaggggagcccagtagccaagataagcca
agctttccctcacctctcacccccgtggtcagaccatggtgggtagagac
aagaaaagtagttgtgtagatctgtgccaacagcaggttttctcctgtag
tgcttttctggtttgcctccaggaggtgtagcatgtatcgagcttctttg
tcttttgttgttcttacaaacacatatatccacatcacagtagtatgcag
aatgggatagaatgggtttcattgtctagaatctccgtgctccatctaca
cagctctctcctcctccttgaactgtttggtaagcactatccattcttaa
atattaaattttttgaaaaaaagttttgagattataatataatacactat
ttccttcttctttcctgcacctcccatgtacccctcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_133025875_133026583
seq2: B6Ng01-174P06.b_50_759

seq1  GAATTCAGAACTTTTCAGCTGGGGAACGAGAGTACCAGTGAGTATAGCTT  50
      |||||||||||||||||||||||||||||||||||||||  || ||||||
seq2  GAATTCAGAACTTTTCAGCTGGGGAACGAGAGTACCAGTATGT-TAGCTT  49

seq1  TACGAGGTAAGCCTGGCCTTGAACTTTCTAAGGAAATTCAAGACAGTCTA  100
      ||||||||| ||||||||||||||||||||||||||||| ||||||||||
seq2  TACGAGGTACGCCTGGCCTTGAACTTTCTAAGGAAATTCGAGACAGTCTA  99

seq1  TCAGAAGTAAAGTGGAAAATAGCTTTATAAGGTATGTTTGGCCTTGAACT  150
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  TCAGAAGTAAAGTGGAAAATAGCTTTATAAGATATGTTTGGCCTTGAACT  149

seq1  TTCTCTAGTGTTAGAAGCCCTTTTGTTCCTTTTCACATGTTATCAAGTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTAGTGTTAGAAGCCCTTTTGTTCCTTTTCACATGTTATCAAGTGG  199

seq1  TTAAGGCAGGGCGGATTCTAGATGAAATTCAGGACAATCTATCAGAAGTA  250
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  TTAAGGCAGGGCGGATTCTAGATGAAGTTCAGGACAATCTATCAGAAGTA  249

seq1  AAGCGGGGAGAGAGAGTAGGAGCAAAGAGAAAATATGGTACACAAAATAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCGGGGAGAGAGAGTAGGAGCAAAGAGAAAATATGGTACACAAAATAA  299

seq1  GTATACAGGCCTTTCCAAGGGTCTTGAACCCGAGGAAAAGTTTAGGTCAG  350
        ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATACAGGCCTTTCCAAGGGTCTTGAACCCGAGGAAAAGTTTAGGTCAG  349

seq1  GTAAGAATACCTGGGGAGAGATTAGAAGGAAGGAGAAGGAAAAAGAAAAG  400
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAAATACCTGGGGAGAGATTAGAAGGAAGGAGAAGGAAAAAGAAAAG  399

seq1  AAAAAAGATCAATTAGAGGAGCCAGTTCTTAATAGTTCTGAATCAGATGA  450
      |||||||||||||||||  |||||||||||| ||||||||||||||||||
seq2  AAAAAAGATCAATTAGAAAAGCCAGTTCTTAGTAGTTCTGAATCAGATGA  449

seq1  AAAGGCTATTAGGGCCTGGAAGGCGCTCTCCCGAGCAGGTGAAGCCACTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGCTATTAGGGCCTGGAAGGCGCTCTCCCGAGCAGGTGAAGCCACTG  499

seq1  GACAATAATGACAGAGGCAGGCTCTTGCAGCCTACAAGGTCTTATTGTCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAATAATGACAGAGGCAGGCTCTTGCAGCCTACAAGGTCTTATTGTCC  549

seq1  ACCCTGGAGTTGTAGATCAGGATTGTAAAGGGGAACTTCAGGTTCTCTGT  600
      ||||| ||||||||||||| |||| |||||||||||||||||||||||||
seq2  ACCCTAGAGTTGTAGATCAAGATTATAAAGGGGAACTTCAGGTTCTCTGT  599

seq1  TCTTGTCC-TCAAGTTGTCTTTTCTATATCACAAAGAGACAAAATAGCTC  649
      |||||||| | |||||||||||||||||||||||||||||| ||||||||
seq2  TCTTGTCCTTTAAGTTGTCTTTTCTATATCACAAAGAGACAGAATAGCTC  649

seq1  AACTAATAATTTTGCCAAGCCTACATGGCTGTTTTTTCTTCCTCTGGT-A  698
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  AACTAATAATTTTGCCAAGCCTACATGGCTGTTTTTTCTTCCTCTGGTAA  699

seq1  TTCCTAGAGCT  709
      |||||||||||
seq2  TTCCTAGAGCT  710

seq1: chr2_146722093_146722830
seq2: B6Ng01-174P06.g_66_802

seq1  GAATTCATGGATGTGGACCTTGGGTGAGATTGCAGCCCCAGCAGACAACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATGGATGTGGACCTTGGGTGAGATTGCAGCCCCAGCAGACAACT  50

seq1  TAATTTCAGGCTGGTGAGTCTTGAGCAAAGGGCCTCAGTCACCCATATCA  100
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  TAATTTCAGGCTGGTGTGTCTTGAGCAAAGGGCCTCAGTCACCCATATCA  100

seq1  AGATCCTGATCTGTAGAAACTGTGAGCTAATAAATTTGCCTTAGGTGCCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCCTGATCTGTAGAAACTGTGAGCTAATAAATTTGCCTTAGGTGCCA  150

seq1  GAGTTGTGATTTGCTACACAGCAGTATACGGTAAATATAAGAATTGGAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTGTGATTTGCTACACAGCAGTATACGGTAAATATAAGAATTGGAAG  200

seq1  CGAGATTTGCATCTCTGCAAGGATTGTATGAGCAGAAGCACCTGTCCATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAGATTTGCATCTCTGCAAGGATTGTATGAGCAGAAGCACCTGTCCATA  250

seq1  ATGGCAGTGAGAAGGTTGAGTCGTACGTGTAGGCTTCAGTGTGAGAGCAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCAGTGAGAAGGTTGAGTCGTACGTGTAGGCTTCAGTGTGAGAGCAC  300

seq1  ATAGAGACAATGAATATAGTTGAGGGGAGCCCAGTAGCCAAGATAAGCCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAGACAATGAATATAGTTGAGGGGAGCCCAGTAGCCAAGATAAGCCA  350

seq1  AGCTTTCCCTCACCTCTCACCCCCGTGGTCAGACCATGGTGGGTAGAGAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTTCCCTCACCTCTCACCCCCGTGGTCAGACCATGGTGGGTAGAGAC  400

seq1  AAGAAAAGTAGTTGTGTAGATCTGTGCCAACAGCAGGTTTTCTCCTGTAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAAGTAGTTGTGTAGATCTGTGCCAACAGCAGGTTTTCTCCTGTAG  450

seq1  TGCTTTTCTGGTTTGCCTCCAGGAGGTGTAGCATGTATCGAGCTTCTTTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTTTCTGGTTTGCCTCCAGGAGGTGTAGCATGTATCGAGCTTCTTTG  500

seq1  TCTTTTGTTGTTCTTACAAACACATATATCCACATCACAGTAGTATGCAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTGTTGTTCTTACAAACACATATATCCACATCACAGTAGTATGCAG  550

seq1  AATGGGATAGAATGGGTTTCATTGTCTAGAATCTCCGTGCTCCATCTACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGGATAGAATGGGTTTCATTGTCTAGAATCTCCGTGCTCCATCTACA  600

seq1  CAGCTCTCTCCTCCTCCTTGAACTG-TTGGTAAGCACTATCCATTCTTAA  649
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  CAGCTCTCTCCTCCTCCTTGAACTGTTTGGTAAGCACTATCCATTCTTAA  650

seq1  ATATTAAATTTTTTGAAAAAAAGTTTTGAGATTATAATATAATTACACTA  699
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  ATATTAAATTTTTTGAAAAAAAGTTTTGAGATTATAATATAA-TACACTA  699

seq1  TTTCCTTCTTCCTTTCCTGCACCTCCCATGTACCCCTCC  738
      |||||||||| ||||||||||||||||||||||||||||
seq2  TTTCCTTCTT-CTTTCCTGCACCTCCCATGTACCCCTCC  737