BAC Information

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BAC

Clone NameB6Ng01-175P10
Chromosome2 (Build37)
Map Location 60,807,282 - 60,916,928
singlet/doubletdoublet
Overlap geneENSMUSG00000075325
Upstream geneBaz2b, LOC667103, LOC667106, Ldha-ps, LOC100039092, March7, Cd302, LOC625861, Ly75, LOC100039176, Pla2r1, Itgb6, Rbms1
Downstream geneTank, Psmd14, Tbr1, LOC100039274, Slc4a10
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-175P10.bB6Ng01-175P10.g
ACCGA003630GA003631
length386739
definitionB6Ng01-175P10.b B6Ng01-175P10.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(60,807,282 - 60,807,667)(60,916,194 - 60,916,928)
sequence
ttagtgtccatgcctcgccagactctgacatgcactgatggttcacactt
cttaggccaactcatgactcttgtcttcagtagctcttccattcctaaga
ttccacagttagttacttcctgtcttgacagctctcttttcttatccata
cagactttttccaaacgtcattctgtacaactccaaccagctctagactc
ctgtgcacctttcaaacctcttcacctggctcacctctactctgttctta
accttgagctcctcgggccttcctttgggttggaagtgacatccagtgtg
agctgttctctgacttgaatcatatgaagtcacctagaagataggggtat
gtttagaacagagcgggcggggtgggatgggggggg
gaattcttttccagaataactgtcaagtcatcaaaaactggatcttttat
gaataacaattgtgttgagtgccttgaatttcttgtgctggttttccatc
attttcaaatctgcttgtaaggttggttttttttttgttttttttttttt
tttgtttttaatgtgggattttatgtgattaagaaagacagcatttcata
atcttgaatacacaagacagcactgacatttctgtgagggctaagacaac
ataatctgggatctgcagggacacaggttcaagacatgtggtgacatcct
ctagatttgtagtcaggcttccagcaacagcttgcacaaaagattctaga
tttatcagataatgctatctaaagagcacagttctttcctagcagtaaag
ctgatggggtctcatggtgggcacagataataaggaacctcgagtggcaa
ctggggactgctcaagaccaagagttttgaagtcaactgtggggttctgc
tccatgagcatctgaggatgctccactggggggaaagaaaggtcagaaat
aagaaaaggtgagtttttgatcctctcaatacactagtcatatactaata
tggaaatgcatcagcttgttgggatggcttgtgttagttttgcttattct
ggacaccaaagcatggtatctgcaaaataaagggaacgttcttccgtcag
cctcacacagttctccagaaatcagtggacaataggcac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_60807282_60807667
seq2: B6Ng01-175P10.b_47_432

seq1  TTAGTGTCCATGCCTCGCCAGACTCTGACATGCACTGATGGTTCACACTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTGTCCATGCCTCGCCAGACTCTGACATGCACTGATGGTTCACACTT  50

seq1  CTTAGGCCAACTCATGACTCTTGTCTTCAGTAGCTCTTCCATTCCTAAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGGCCAACTCATGACTCTTGTCTTCAGTAGCTCTTCCATTCCTAAGA  100

seq1  TTCCACAGTTAGTTACTTCCTGTCTTGACAGCTCTCTTTTCTTATCCATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCACAGTTAGTTACTTCCTGTCTTGACAGCTCTCTTTTCTTATCCATA  150

seq1  CAGACTTTTTCCAAACGTCATTCTGTACAACTCCAACCAGCTCTAGACTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACTTTTTCCAAACGTCATTCTGTACAACTCCAACCAGCTCTAGACTC  200

seq1  CTGTGCACCTTTCAAACCTCTTCACCTGGCTCACCTCTACTCTGTTCTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGCACCTTTCAAACCTCTTCACCTGGCTCACCTCTACTCTGTTCTTA  250

seq1  ACCTTGAGCTCCTCGGGCCTTCCTTTGGGTTGGAAGTGACATCCAGTGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTGAGCTCCTCGGGCCTTCCTTTGGGTTGGAAGTGACATCCAGTGTG  300

seq1  AGCTGTTCTCTGACTTGAATCATATGAAGTCACCTAGAAGATAGGGGTAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGTTCTCTGACTTGAATCATATGAAGTCACCTAGAAGATAGGGGTAT  350

seq1  GTTTAGAACAGAGCGGGCGGGGTGGGATGGGGGGGG  386
      ||||||||||||||||||||||||||||||||||||
seq2  GTTTAGAACAGAGCGGGCGGGGTGGGATGGGGGGGG  386

seq1: chr2_60916194_60916928
seq2: B6Ng01-175P10.g_63_801 (reverse)

seq1  GTGCCTATTGTCCACTGA-TTCTGGAGAACTGTGTGAGGCTGACGG-AGA  48
      |||||||||||||||||| ||||||||||||||||||||||||||| |||
seq2  GTGCCTATTGTCCACTGATTTCTGGAGAACTGTGTGAGGCTGACGGAAGA  50

seq1  ACGTTCCCTTTATTTTGCAGATACCATGCTTTGGTGTCCAGGATAAGCAA  98
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  ACGTTCCCTTTATTTTGCAGATACCATGCTTTGGTGTCCAGAATAAGCAA  100

seq1  AACT-ACACAAGCCATCCCAACAAGCTGATGCATTTCCATATTAGTATAT  147
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTAACACAAGCCATCCCAACAAGCTGATGCATTTCCATATTAGTATAT  150

seq1  GACTAGTGTATTGAGAGGATC-AAAACTCACCTTTTCTTATTTCTGACCT  196
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  GACTAGTGTATTGAGAGGATCAAAAACTCACCTTTTCTTATTTCTGACCT  200

seq1  TTCTTTCCCCCCAGTGGAGCATCCTCAGATGCTCATGGAGCAGAACCCCA  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTCCCCCCAGTGGAGCATCCTCAGATGCTCATGGAGCAGAACCCCA  250

seq1  CAGTTGACTTCAAAACTCTTGGTCTTGAGCAGTCCCCAGTTGCCACTCGA  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTGACTTCAAAACTCTTGGTCTTGAGCAGTCCCCAGTTGCCACTCGA  300

seq1  GGTTCCTTATTATCTGTGCCCACCATGAGACCCCATCAGCTTTACTGCTA  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTCCTTATTATCTGTGCCCACCATGAGACCCCATCAGCTTTACTGCTA  350

seq1  GGAAAGAACTGTGCTCTTTAGATAGCATTATCTGATAAATCTAGAATCTT  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAGAACTGTGCTCTTTAGATAGCATTATCTGATAAATCTAGAATCTT  400

seq1  TTGTGCAAGCTGTTGCTGGAAGCCTGACTACAAATCTAGAGGATGTCACC  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGCAAGCTGTTGCTGGAAGCCTGACTACAAATCTAGAGGATGTCACC  450

seq1  ACATGTCTTGAACCTGTGTCCCTGCAGATCCCAGATTATGTTGTCTTAGC  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGTCTTGAACCTGTGTCCCTGCAGATCCCAGATTATGTTGTCTTAGC  500

seq1  CCTCACAGAAATGTCAGTGCTGTCTTGTGTATTCAAGATTATGAAATGCT  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCACAGAAATGTCAGTGCTGTCTTGTGTATTCAAGATTATGAAATGCT  550

seq1  GTCTTTCTTAATCACATAAAATCCCACATTAAAAACAAAAAAAAAAAAAA  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTTCTTAATCACATAAAATCCCACATTAAAAACAAAAAAAAAAAAAA  600

seq1  AACAAAAAAAAAACCAACCTTACAAGCAGATTTGAAAATGATGGAAAACC  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAAAAAAAAACCAACCTTACAAGCAGATTTGAAAATGATGGAAAACC  650

seq1  AGCACAAGAAATTCAAGGCACTCAACACAATTGTTATTCATAAAAGATCC  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACAAGAAATTCAAGGCACTCAACACAATTGTTATTCATAAAAGATCC  700

seq1  AGTTTTTGATGACTTGACAGTTATTCTGGAAAAGAATTC  735
      |||||||||||||||||||||||||||||||||||||||
seq2  AGTTTTTGATGACTTGACAGTTATTCTGGAAAAGAATTC  739