BAC Information

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BAC

Clone NameB6Ng01-175P12
Chromosome2 (Build37)
Map Location 81,710,350 - 81,711,473
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040624, LOC100040655, LOC100040704
Downstream geneZfp804a, LOC100041308, A130030D18Rik, EG624362, LOC433550, LOC269292
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-175P12.bB6Ng01-175P12.g
ACCGA003634GA003635
length7161,125
definitionB6Ng01-175P12.b B6Ng01-175P12.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctgatcttgacaagcccttcatcatgaatgggtgttggattttg
tcaaatttttctcagcatctaatgagattatcatgctttttttttctttg
agtttatttatatagtagattacattgatggatttctgtatattgaacca
tttctgcatccctgggatgaagactacttgatcatgacggatcattgttt
tgatgtgatcctggattcagtttgcaagaattttattgagtattttggta
tcgatattcataaaagaaattggtctgatgttctccttctttgttgggtc
ttggtgtggtttgggtatcagagtaattgtggctccatagaacgaattga
gtagagtaccttctgtttctatattgtggaagagtttgaagagtattggt
attaggtcatatctgaaggtctgatggaactctgcactaaacccatctag
tcctgggcatttttttttggttgggagactattaatgactatttctcttt
ccttagggaaaatgggactgtttaaatcattaatcggatcatgatttaac
tttcatccctagtatctgtctagaaattagtccatttcatccagatcttc
aggttttgaggaatataggttttcaaagtaggatctggtgatttttgtat
ttcctcagattcttttgtatgtctcccttttcattttctgattttgttaa
ttaaggatactgtctc

gaattccaggacagccagggctttatacagaaaccctgtctcgaaaaaat
ttaaaaaagagaaaaaaaaaaaagaaaaaagaaagaaaaaaatgccaata
atacacaaaaaacagtcatggtcttcacagtgaagtagtttttttttctt
tacattttaacattaactgatattatataattaagggctttccccaaata
ttcactgattacatatcaattaaaataataagttacaataagccaagaat
acttttatcatttcatcacatttagagctgcatacacttatattatatat
gtaaacttcatagagctatctacagatttagcgtgtatcttttccagtaa
ttttaagcatcacccaaattattcaatttaacattcagtttacttgatga
cttaaatatgaaaccttttacatcagaacaaacatttttttcacaaacat
agctgtatataagttacaaatggtgttagggacattaaaatcactgtata
ggccagcccagatcaattgaatcagaattacagtgatgatatcttaagta
taattaaattctaatatatataatatatatgtataattaattttatacat
atgtatatatggttgagaaaatttgatatccatcaaatgagttgacatta
aaagtatcatatagaagtctttgataaatgagttgtgtctccaccttgca
gccaactagaagtattgtttgcgtttctcttcctactttttctttcttgt
catgctggcaaaattaaacttttaacattctccatattccccctatattc
atgtacattcttgtatatttgcatgccatctgttatcctgtagggacttt
tgaaacacaggttatacatgaattttctttatcctccaatggaagttctt
atatcttaagctctctatttatttgatttttttggagatgttgccttaat
taattgtctcctaaaaactttgtgttattatttgtttctagttaaataac
tatttgaatgatggatattttatattaaacatcataggcttaccttctta
atttccttagctttcatgccacccatccactaaaagtcattctcttttgt
tatcgattgcccttcagttagccac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_81710350_81711473
seq2: B6Ng01-175P12.g_64_1188 (reverse)

seq1  GTGGCT-ACTGTGAAGGCAATCAGATAAACAAAGAG-ATG-CCTATAGTG  47
      |||||| ||||  | ||||||| |||||  |||||| ||| | | |||||
seq2  GTGGCTAACTG-AAGGGCAATC-GATAACAAAAGAGAATGACTTTTAGTG  48

seq1  GATGGGTGGCATGAAAGCTAAGATATTTTAAAGAAAGGTATAGCTATTGA  97
      ||||||||||||||||||||||  | ||  ||| |||||| |||   |||
seq2  GATGGGTGGCATGAAAGCTAAGGAAATT--AAG-AAGGTA-AGCCTATGA  94

seq1  TGTTTATATATAAATATTCCCATCATTTCAATAGTTA-TTAACTAGAAAA  146
      |||||| ||||||| ||  ||||||||  |||||||| |||||||| |||
seq2  TGTTTA-ATATAAA-ATATCCATCATTCAAATAGTTATTTAACTAG-AAA  141

seq1  CAAATAATGACACAAAGTTTTTAGGAGACAATT-ATTAAGGCAACATTCT  195
      |||||||| |||||||||||||||||||||||| |||||||||||||   
seq2  CAAATAATAACACAAAGTTTTTAGGAGACAATTAATTAAGGCAACATCTC  191

seq1  CAAAAAAATCAAAATAAATAGAGAGCTT-AGATATAAG-ACTTCCATTGG  243
      |||||||||| ||||||||||||||||| ||||||||| |||||||||||
seq2  CAAAAAAATC-AAATAAATAGAGAGCTTAAGATATAAGAACTTCCATTGG  240

seq1  A-GATAAAG-AAATTCATGTATAACCTGTGTTTC-AAAGTCCCTACAGGA  290
      | ||||||| |||||||||||||||||||||||| |||||||||||||||
seq2  AGGATAAAGAAAATTCATGTATAACCTGTGTTTCAAAAGTCCCTACAGGA  290

seq1  T-ACAGATGGCATGCAATTATACAAGAATGTACATGAATATAGGGGGAAT  339
      | ||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  TAACAGATGGCATGCAAATATACAAGAATGTACATGAATATAGGGGGAAT  340

seq1  ATGGAGAATGTTAAAAGTTTAATTTTGCCAGCATGACAAGAAAGAAAAAG  389
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAGAATGTTAAAAGTTTAATTTTGCCAGCATGACAAGAAAGAAAAAG  390

seq1  TAGGAAGAGAAACGCAAACAATACTTCTAGTTGGCTGCAAGGTGGAGACA  439
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGAAGAGAAACGCAAACAATACTTCTAGTTGGCTGCAAGGTGGAGACA  440

seq1  CAACTCATTTATCAAAGACTTCTATATGATACTTTTAATGTCAACTCATT  489
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTCATTTATCAAAGACTTCTATATGATACTTTTAATGTCAACTCATT  490

seq1  TGATGGATATCAAATTTTCTCAACCATATATACATATGTATAAAATTAAT  539
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGGATATCAAATTTTCTCAACCATATATACATATGTATAAAATTAAT  540

seq1  TATACATATATATTATATATATTAGAATTTAATTATACTTAAGATATCAT  589
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACATATATATTATATATATTAGAATTTAATTATACTTAAGATATCAT  590

seq1  CACTGTAATTCTGATTCAATTGATCTGGGCTGGCCTATACAGTGATTTTA  639
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGTAATTCTGATTCAATTGATCTGGGCTGGCCTATACAGTGATTTTA  640

seq1  ATGTCCCTAACACCATTTGTAACTTATATACAGCTATGTTTGTGAAAAAA  689
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCCCTAACACCATTTGTAACTTATATACAGCTATGTTTGTGAAAAAA  690

seq1  ATGTTTGTTCTGATGTAAAAGGTTTCATATTTAAGTCATCAAGTAAACTG  739
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTTGTTCTGATGTAAAAGGTTTCATATTTAAGTCATCAAGTAAACTG  740

seq1  AATGTTAAATTGAATAATTTGGGTGATGCTTAAAATTACTGGAAAAGATA  789
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTTAAATTGAATAATTTGGGTGATGCTTAAAATTACTGGAAAAGATA  790

seq1  CACGCTAAATCTGTAGATAGCTCTATGAAGTTTACATATATAATATAAGT  839
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGCTAAATCTGTAGATAGCTCTATGAAGTTTACATATATAATATAAGT  840

seq1  GTATGCAGCTCTAAATGTGATGAAATGATAAAAGTATTCTTGGCTTATTG  889
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGCAGCTCTAAATGTGATGAAATGATAAAAGTATTCTTGGCTTATTG  890

seq1  TAACTTATTATTTTAATTGATATGTAATCAGTGAATATTTGGGGAAAGCC  939
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTTATTATTTTAATTGATATGTAATCAGTGAATATTTGGGGAAAGCC  940

seq1  CTTAATTATATAATATCAGTTAATGTTAAAATGTAAAGAAAAAAAAACTA  989
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAATTATATAATATCAGTTAATGTTAAAATGTAAAGAAAAAAAAACTA  990

seq1  CTTCACTGTGAAGACCATGACTGTTTTTTGTGTATTATTGGCATTTTTTT  1039
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCACTGTGAAGACCATGACTGTTTTTTGTGTATTATTGGCATTTTTTT  1040

seq1  CTTTCTTTTTTCTTTTTTTTTTTTCTCTTTTTTAAATTTTTTCGAGACAG  1089
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTTTTTTCTTTTTTTTTTTTCTCTTTTTTAAATTTTTTCGAGACAG  1090

seq1  GGTTTCTGTATAAAGCCCTGGCTGTCCTGGAATTC  1124
      |||||||||||||||||||||||||||||||||||
seq2  GGTTTCTGTATAAAGCCCTGGCTGTCCTGGAATTC  1125


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