BAC Information

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BAC

Clone NameB6Ng01-176H12
Chromosome2 (Build37)
Map Location 115,926,568 - 115,927,662
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100043232, LOC100043236, BC052040, Mrg1, G630016G05Rik, 2810405F15Rik
Downstream geneLOC433464, Tmco5, LOC100043557, LOC241621
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-176H12.bB6Ng01-176H12.g
ACCGA003995GA003996
length1,0891,201
definitionB6Ng01-176H12.b B6Ng01-176H12.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagcacctgcccatgtaactaggactttagttttggagaccagta
ggatttcagctggtaaaaatgtaacccagggaaggagtaaggcagagtgg
tggaattaaaggggatttcacagagtgagaaattgggtgcatgttagctt
cagaaatagtatctatttcccagtagctgtagagaagttgagaacataac
agaagacctgtttacagtgtctcattaaggggtttagaattacttcttcc
tttttttttttttttttaaaggcattcctttaaaaaaagatctggggtag
actgcatggtgtggacacagacctctgatctccaaagtttgtctggtcgt
gtcatggaaaacaactgaagggtgaattttgaagatgggtgaactagttc
aaacagaggacctaaggagggatgtagctgtggagagagagaggctacag
tgaaacagtaagaggtgtgatgtgggcctggagaggcagttcagccctta
agagtgcctgctgctctggcccaactggaggagcctttactgcaatcctc
tctggaaacttactaccacctgtaactccagctcctgggttcttctgccc
tcttctggcttccttgggtactgcactcaggagcacatactttcccttcc
ccataaatatacaaataaaattaaaataaatcttaaaaaaaaaaaaaccc
agaacaaactgggagtattttgagatacatggaatgaaaggtatataagt
gatattatgacagacattttcatatgtttccatatgctagtattaatttg
gatttttttgaaattatgtagacttgaacactagtagcacttccaaattt
cttgtcacactcatcacacatggcttctgctgatcagtctatcaagggtc
tcattccacaatcctacaattgctttcttaagtaccccactatcctggtt
ttggggttcaggattagatttttttcagtacctttggaggatgttgttgg
gttactttcaaattgggtacctgtgtgtgtacgttccggtgtgggcagga
tccaggcagtcgaagatgtcacaggagctctgagctggg
gaattccaagctcaccataggcttccaggattttctgggaaccattggaa
cgctggtggaggcttagcaatgtcaaaaaatcaatccttaaaggcactta
taataaaacaatactgaaagagagcacacagatccaaacaccagattaac
aaggggacagggtttgagtatacgggctatgggaatgccaagatttcagg
aggcatagtttccttgaaactctttgccttgtgagtgcttccaggccttt
tggtctgtcaagcagggttcactggagtgggcatagcaagtcagagtttt
gactgtggaatggcaaacctctccctcatttgatgccctgtcttccagct
ggaaatatgccctataagttccctctccctactgttgggcatttcatcta
aggtccctcccgttgagtcctgaaagtctctcacctcccacgtctctggt
acattcctggagtccccccaaccttctatctcctagggttgcctgtttcc
attctttctgctggacttcagagcctcagtcatttttcctcacccaatac
cagatcaggttcccctctccctccccattccctgtccactttttctcaca
ggtccctccctccccatttgtgattgctttcttctccctcccaagtggga
ctgaggcatccttaataagtgggcccttcagcttgttgaccttttgagtt
ttatggactataacttgtgtattctgtaatttttttcttttggctaatat
ccacttattagtgagtacataccatgcatgtccttttgggtcttagttac
ctcactcagaatgatattttctagttccatctatttgcctacaaaactca
ggatgtcctagtactccactgtgtaaatgaaccacattttctgtatctat
tcttctgtggtgggacatctgggttgttttcagcttctggctatcacaaa
taaggccgctatgaacatagtggacatgtactccatggcatggtgtggca
tctttttgggttatatccagagtagaattgctgggtctcagtagatcttt
ttcattttctgagacttccagatgatttcaggatgtttgtacaggtgtgc
atcccacagcatgagagtgttcttctttctctatctctctaacggtgttg
tccactaaggttagttagcaatcttttgtttttcccgagatattttttca
t
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_115926568_115927662
seq2: B6Ng01-176H12.b_43_1131

seq1  GAATTCAGCACCTGCCCATGTAACTAGGACTTTAGTTTTGGAGACCAGTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGCACCTGCCCATGTAACTAGGACTTTAGTTTTGGAGACCAGTA  50

seq1  GGATTTCAGCTGGTAAAAATGTAACCCAGGGAAGGAGTAAGGCAGAGTGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTTCAGCTGGTAAAAATGTAACCCAGGGAAGGAGTAAGGCAGAGTGG  100

seq1  TGGAATTAAAGGGGATTTCACAGAGTGAGAAATTGGGTGCATGTTAGCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAATTAAAGGGGATTTCACAGAGTGAGAAATTGGGTGCATGTTAGCTT  150

seq1  CAGAAATAGTATCTATTTCCCAGTAGCTGTAGAGAAGTTGAGAACATAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAATAGTATCTATTTCCCAGTAGCTGTAGAGAAGTTGAGAACATAAC  200

seq1  AGAAGACCTGTTTACAGTGTCTCATTAAGGGGTTTAGAATTACTTCTTCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGACCTGTTTACAGTGTCTCATTAAGGGGTTTAGAATTACTTCTTCC  250

seq1  TTTTTTTTTTTTTTTTTAAAGGCATTCCTTTAAAAAAAGATCTGGGGTAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTTTTTTTTTAAAGGCATTCCTTTAAAAAAAGATCTGGGGTAG  300

seq1  ACTGCATGGTGTGGACACAGACCTCTGATCTCCAAAGTTTGTCTGGTCGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCATGGTGTGGACACAGACCTCTGATCTCCAAAGTTTGTCTGGTCGT  350

seq1  GTCATGGAAAACAACTGAAGGGTGAATTTTGAAGATGGGTGAACTAGTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATGGAAAACAACTGAAGGGTGAATTTTGAAGATGGGTGAACTAGTTC  400

seq1  AAACAGAGGACCTAAGGAGGGATGTAGCTGTGGAGAGAGAGAGGCTACAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAGAGGACCTAAGGAGGGATGTAGCTGTGGAGAGAGAGAGGCTACAG  450

seq1  TGAAACAGTAAGAGGTGTGATGTGGGCCTGGAGAGGCAGTTCAGCCCTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAACAGTAAGAGGTGTGATGTGGGCCTGGAGAGGCAGTTCAGCCCTTA  500

seq1  AGAGTGCCTGCTGCTCTGGCCCAACTGGAGGAGCCTTTACTGCAATCCTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTGCCTGCTGCTCTGGCCCAACTGGAGGAGCCTTTACTGCAATCCTC  550

seq1  TCTGGAAACTTACTACCACCTGTAACTCCAGCTCCTGGGTTCTTCTGCCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGAAACTTACTACCACCTGTAACTCCAGCTCCTGGGTTCTTCTGCCC  600

seq1  TCTTCTGGCTTCCTTGGGTACTGCACTCAGGAGCACATACTTTCCCTTCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTGGCTTCCTTGGGTACTGCACTCAGGAGCACATACTTTCCCTTCC  650

seq1  CCATAAATATACAAATAAAATTAAAATAAATCTTAAAAAAAAAAAAACCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATAAATATACAAATAAAATTAAAATAAATCTTAAAAAAAAAAAAACCC  700

seq1  AGAACAAACTGGGAGTATTTTGAGATACATGGAATGAAAGGTATATAAGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACAAACTGGGAGTATTTTGAGATACATGGAATGAAAGGTATATAAGT  750

seq1  GATATTATGACAGACATTTTCATATGTTTCCATATGCTAGTATTAATTTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATTATGACAGACATTTTCATATGTTTCCATATGCTAGTATTAATTTG  800

seq1  GATTTTTTTGAAAATTATGTAGACTTGAACACTAGTAGCACTTCCAAATT  850
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  GATTTTTTTG-AAATTATGTAGACTTGAACACTAGTAGCACTTCCAAATT  849

seq1  TCTTGTCACACTCATCACACATGGCTTCTGCTGATCAGTCTATCAAGGGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGTCACACTCATCACACATGGCTTCTGCTGATCAGTCTATCAAGGGT  899

seq1  CTCATT-CACAATCCTACAATTGCTTTCTTAAGTACCCCACTATCCTGG-  948
      |||||| |||||||||||||||||||||||||||||||||||||||||| 
seq2  CTCATTCCACAATCCTACAATTGCTTTCTTAAGTACCCCACTATCCTGGT  949

seq1  TTTGGGGTTCAAGATTAGAATTTTTTTCAGTAACTTT-GAAGATG-TGTT  996
      ||||||||||| |||||| ||||||||||||| |||| || |||| ||||
seq2  TTTGGGGTTCAGGATTAG-ATTTTTTTCAGTACCTTTGGAGGATGTTGTT  998

seq1  GTGTTTACTTTTTAAAATTGTGTACCTGTGTGTGTACGTATCGGTGTGGG  1046
      | | ||||  ||| |||||| ||||||||||||||||||  |||||||||
seq2  G-GGTTAC--TTTCAAATTGGGTACCTGTGTGTGTACGTTCCGGTGTGGG  1045

seq1  CAGGTATCCGAGGCAAGCAGAAGAGGTCACAGGAGGCTCTGAAGCTGGG  1095
      |||| |||| |||| ||  ||||| ||||||||| |||||| |||||||
seq2  CAGG-ATCC-AGGC-AGTCGAAGATGTCACAGGA-GCTCTG-AGCTGGG  1089