BAC Information

Click to search

BAC

Clone NameB6Ng01-176L18
Chromosome2 (Build37)
Map Location 82,085,564 - 82,086,725
singlet/doubletsinglet
Overlap geneZfp804a
Upstream geneLOC100040704
Downstream geneLOC100041308, A130030D18Rik, EG624362, LOC433550, LOC269292, LOC433440, Fsip2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-176L18.bB6Ng01-176L18.g
ACCGA004195GA004196
length1,2161,160
definitionB6Ng01-176L18.b B6Ng01-176L18.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctgaaagaggaaatgagtaaatctttttttaaaaaaaaatctac
ggaagcaaacaaatagtggaaagaattgaataaatctttttaagacctga
aagaggaaataaaatcaataaagtaatcccaaactgaaggaaacatggaa
gtaaaaaaaatttagaaacccactggaaacaaagagtcaaggttcaccaa
tagaatcaaagagatagaagagtcctattctcaggatttaaagatatggt
agaaaaaatactgacatcagtcaatgaaaattttaaatctataaggcatc
cagactcaaaacctccaggaaatctataacatcagagaaaagcaaaacct
aagaataatagaagtagcaaaaggaaaggaaacatatctcaaggacacaa
aaactatgtttgtcaaaatcataaaagaaaatttcctataacaagtgatg
cctatcaacatacaagaagcacactgaacacaaagtaaacagaaccagaa
acaaattatctcagtacatcacaatcaagacagtaaatctacagacacag
aaagaatattaaaaactttaaggaaaaaattccacataacagaaacacag
acctgttagaattatacctgacttctcaatggagaccctaaaagctggaa
gggcctgggtagattctaagagaccacaaatgctctgccagacaataata
cccagaaaaactctaccttaggtgaaaaaaataagacattatttcatgat
aaaattaaattaaattaaatttatctctaaattcaatactataaaaggca
caagaaggtaactccaaccaaaggaggttaactgcatctaaggaaacata
aggaacaaataatcccacactagcaaagccaaaaggatggaaagggcaca
cacactaccaccaccaccaataccaacatgtcaacaacaaaataacatga
atcagcattcattggtaattgatatctttcaacatcaaacatctcaattc
cttaggaaaaaaccctagactacagaatgaatgtgtaaactggattcatc
tgtatgctacataacaggaaacacacccataaccgccaacgtcatatttc
cttagtgtaaggttgggaaaatacatatttcagcaaaaacttaagaaaac
caacctgttgtagaccggttaatacctatgaaatatattttcagacacaa
atctctatatagagga
gaattcatttatgttgtaatgcaaatacatataatttttataatttgggc
ttggagattatttcagttgtatatctctctttggctagcaagatctctca
gtgggtaaaggcattcaccattactgagtagcttttagacaaaaatctct
aagcttatgtcaattttgttactctagagaagaaaagttatttgttgtct
ttagtcaatttgataaccttttggtaatattttaagaagaatagaaggaa
tagaagtataaatatttataaaacttaatatagactcttaccagaaattt
tgaggagccctaagttggagcactacattttgtcagtgaatctgaggtcc
tctcttggggagtttaagtttttgtttttgtttgtttgtttgttttttta
agaatttaagagtggactgtgaaggaaacatgataacaatcatttagagt
ttaaagtaacactctggccagccaagctataaatctagtcagcttcctga
aagaggaagatagagaagagggagaaagaaaagaatgtgttttgttaagt
ggtcatatggtagaaagaatatggattaacttcatagaggaatgatgtga
aagcccagagtgtgcaagaaagcatagccaggctttgggcatgtatcaga
aatgtggaaaaaggagaattggtaaaacataaaaaagtataaaggatgct
tttctgagtaactacatgagtggctgcacagagagccaggcttctgggag
gagaagcattgtttcagtcagatggtgattactattcctcccatctcctc
agtatctcatatgctgaatggaccttcctgagaacagtgttcttgccctg
tggctggccagccaaatggaatgttaggtctctgagggaaaatcctgctg
tgtctgtttagtgttgcttctatagaattgaattcagagagaccacctga
tatttgtgtaactaaattttaaaataatatctacagaaattttcagttga
ttcatcagtgtatctgatattattgatttctgctgaatgttcaaagctat
tgtaaacatctgaagaataagtacctacatgattaatggtggcatttaac
taaatggaaaataaccttttggttttctgtttagttacacctcagtctta
aggcttgatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_82085564_82086725
seq2: B6Ng01-176L18.g_65_1224

seq1  GAATTCATTTATGTTGTAATGCAAATACATATAATTTTTATAATTTGGGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTTATGTTGTAATGCAAATACATATAATTTTTATAATTTGGGC  50

seq1  TTGGAGATTATTTCAGTTGTATATCTCTCTTTGGCTAGCAAGATCTCTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAGATTATTTCAGTTGTATATCTCTCTTTGGCTAGCAAGATCTCTCA  100

seq1  GTGGGTAAAGGCATTCACCATTACTGAGTAGCTTTTAGACAAAAATCTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGTAAAGGCATTCACCATTACTGAGTAGCTTTTAGACAAAAATCTCT  150

seq1  AAGCTTATGTCAATTTTGTTACTCTAGAGAAGAAAAGTTATTTGTTGTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTTATGTCAATTTTGTTACTCTAGAGAAGAAAAGTTATTTGTTGTCT  200

seq1  TTAGTCAATTTGATAACCTTTTGGTAATATTTTAAGAAGAATAGAAGGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTCAATTTGATAACCTTTTGGTAATATTTTAAGAAGAATAGAAGGAA  250

seq1  TAGAAGTATAAATATTTATAAAACTTAATATAGACTCTTACCAGAAATTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAGTATAAATATTTATAAAACTTAATATAGACTCTTACCAGAAATTT  300

seq1  TGAGGAGCCCTAAGTTGGAGCACTACATTTTGTCAGTGAATCTGAGGTCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGAGCCCTAAGTTGGAGCACTACATTTTGTCAGTGAATCTGAGGTCC  350

seq1  TCTCTTGGGGAGTTTAAGTTTTTGTTTTTGTTTGTTTGTTTGTTTTTTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTGGGGAGTTTAAGTTTTTGTTTTTGTTTGTTTGTTTGTTTTTTTA  400

seq1  AGAATTTAAGAGTGGACTGTGAAGGAAACATGATAACAATCATTTAGAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATTTAAGAGTGGACTGTGAAGGAAACATGATAACAATCATTTAGAGT  450

seq1  TTAAAGTAACACTCTGGCCAGCCAAGCTATAAATCTAGTCAGCTTCCTGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGTAACACTCTGGCCAGCCAAGCTATAAATCTAGTCAGCTTCCTGA  500

seq1  AAGAGGAAGATAGAGAAGAGGGAGAAAGAAAAGAATGTGTTTTGTTAAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGGAAGATAGAGAAGAGGGAGAAAGAAAAGAATGTGTTTTGTTAAGT  550

seq1  GGTCATATGGTAGAAAGAATATGGATTAACTTCATAGAGGAATGATGTGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCATATGGTAGAAAGAATATGGATTAACTTCATAGAGGAATGATGTGA  600

seq1  AAGCCCAGAGTGTGCAAGAAAGCATAGCCAGGCTTTGGGCATGTATCAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCCAGAGTGTGCAAGAAAGCATAGCCAGGCTTTGGGCATGTATCAGA  650

seq1  AATGTGGAAAAAGGAGAATTGGTAAAACATAAAAAAGTATAAAGGATGCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTGGAAAAAGGAGAATTGGTAAAACATAAAAAAGTATAAAGGATGCT  700

seq1  TTTCTGAGTAACTACATGAGTGGCTGCACAGAGAGCCAGGCTTCTGGGAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGAGTAACTACATGAGTGGCTGCACAGAGAGCCAGGCTTCTGGGAG  750

seq1  GAGAAGCATTGTTTCAGTCAGATGGTGATTACTATTCCTCCCATCTCCTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAGCATTGTTTCAGTCAGATGGTGATTACTATTCCTCCCATCTCCTC  800

seq1  AGTATCTCATATGCTGAATGGACCTTCCTGAGAACAGTGTTCTTGCCCTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATCTCATATGCTGAATGGACCTTCCTGAGAACAGTGTTCTTGCCCTG  850

seq1  TGGCTGGCCAGCCAAATGGAATGTTAGGTCTCTGAGGGAAAATCCTGCTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTGGCCAGCCAAATGGAATGTTAGGTCTCTGAGGGAAAATCCTGCTG  900

seq1  TGTCTGTTTAGTGTTGCTTCTATAGAATTGAATTCAGAGAAGACCACCTG  950
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  TGTCTGTTTAGTGTTGCTTCTATAGAATTGAATTCAGAG-AGACCACCTG  949

seq1  ATA-TTGTGTAACTAAATTTTAAAAATAATATCTACAG-AATTTTCAGGT  998
      ||| ||||||||||||||||| |||||||||||||||| |||||||| ||
seq2  ATATTTGTGTAACTAAATTTT-AAAATAATATCTACAGAAATTTTCA-GT  997

seq1  TGATTTCATCAGTGTTATCTGATA-TATTGATTTCTGCTGAATGTTCAAA  1047
      ||| |||||||||| ||||||||| |||||||||||||||||||||||||
seq2  TGA-TTCATCAGTG-TATCTGATATTATTGATTTCTGCTGAATGTTCAAA  1045

seq1  GCTATTGTAAACATCTG-AGATAAAGTACTTACAATGATTA--TGTGGAA  1094
      ||||||||||||||||| |||  |||||| ||| |||||||   |||| |
seq2  GCTATTGTAAACATCTGAAGAATAAGTACCTAC-ATGATTAATGGTGGCA  1094

seq1  TTAACATAAAATAGAAAATAA-CTTTTG--TTTCTGTTTTAAAGTACACA  1141
      || | |  |||| |||||||| ||||||  |||||||||   |||  |||
seq2  TTTA-ACTAAATGGAAAATAACCTTTTGGTTTTCTGTTT---AGT-TACA  1139

seq1  CCTCAGTCTTTAAGCTTGATT  1162
      |||||||||| | ||||||||
seq2  CCTCAGTCTTAAGGCTTGATT  1160