BAC Information

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BAC

Clone NameB6Ng01-177L05
Chromosome2 (Build37)
Map Location 69,458,436 - 69,573,521
singlet/doubletdoublet
Overlap geneBbs5, Kbtbd10, Fastkd1, Ppig
Upstream gene4932414N04Rik, LOC667443, Lass6, Nostrin, Spc25, G6pc2, Abcb11, Dhrs9, Lrp2
Downstream gene4930578N16Rik, Phospho2, LOC433432, Klhl23, Ssb, Mettl5, 4930550G17Rik, Zfp650, Myo3b, LOC100040021, Sp5, 4933404M02Rik, LOC100040068, Gad1, LOC100039766, Gorasp2, Tlk1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-177L05.bB6Ng01-177L05.g
ACCGA004896GA004897
length431891
definitionB6Ng01-177L05.b B6Ng01-177L05.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(69,458,436 - 69,458,872)(69,572,652 - 69,573,521)
sequence
caggtagccagatcacaacatctctccaaccctcgatgatcagatcattt
tagtcccagagaaagccactgtgcccaactaaaaataaacctaaaaacgg
aaaaaataaaacgaaagcaaaaatagatttacaaatatcctttaaaaata
gataactgggtgtggtggcatacacaggtgttctagcacttggcaagcag
tgacagaccaacctgtgagtgttcaaggccagcctgggttacatatctag
accctcaaaaggaaatgtgtgtgtgggggggtgctgactgggcaaagtgg
agaaaagtctgccacatgagtgtgaagatctgaatttggataccctgcat
cagctcacacacacacacacacacacagagggagggaagagaggagggaa
aaaggaaggaagttagaagggatggagggtg
gaattcaagtacactgtagctatcttcagacacatctgaagagggcatgg
gatcccattacagatggttgtgagccaacatgtggttgctgagaattgaa
ctcagcacctctggaagagcagtcagtgcgcttaaccactgaatctctca
ggcctcaccctaaccttttaaacagttaacgtggagggttttagaggaat
tgagagaggtgggaacagtcagtctgatggctctgagatatatttgctga
acatgaatagaaacagtccacttaatttcatatattttagaaattaactg
ccaacatgtagttgtaggtacttctgcatccaattttcaaatctctctgg
aatatctgaaaatgatagtatctagtttatggaataagtaactagtactt
agtgttcctgttttcttcaacacaggttttaatagctgagattctatgtt
ccaacaggcttactcatgttattcaactactctaggtttttgagcttgtt
atctgtgatattgaataaaattttgtgttgaagaaaagttgaaattaaac
tgggtcaacctcaaacaagagcataataattacatgtactggagaagtta
agatggggttcaaggaccctgatcaagagactttcaaaacaaactcacct
gaatctaaagaaagcacttgttcaatgcattttttgcaagtacccctacc
tctcttttattctcaaggtcaacctcaaaactatgtagttagaagcctgg
tatttggttacgtagagacatactggtatataaaatctctaaagataaaa
tacttggtgtacaagcttgagtttgatccctagaatcacattagaaagct
tgggtacagtaattgatgggaactgatgtgggtggatggta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_69458436_69458872
seq2: B6Ng01-177L05.b_45_481

seq1  GAATTCCAGGTAGCCAGATCACAACATCTCTCCAACCCTCGATGATCAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGTAGCCAGATCACAACATCTCTCCAACCCTCGATGATCAGA  50

seq1  TCATTTTAGTCCCAGAGAAAGCCACTGTGCCCAACTAAAAATAAACCTAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTTAGTCCCAGAGAAAGCCACTGTGCCCAACTAAAAATAAACCTAA  100

seq1  AAACGGAAAAAATAAAACGAAAGCAAAAATAGATTTACAAATATCCTTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACGGAAAAAATAAAACGAAAGCAAAAATAGATTTACAAATATCCTTTA  150

seq1  AAAATAGATAACTGGGTGTGGTGGCATACACAGGTGTTCTAGCACTTGGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAGATAACTGGGTGTGGTGGCATACACAGGTGTTCTAGCACTTGGC  200

seq1  AAGCAGTGACAGACCAACCTGTGAGTGTTCAAGGCCAGCCTGGGTTACAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAGTGACAGACCAACCTGTGAGTGTTCAAGGCCAGCCTGGGTTACAT  250

seq1  ATCTAGACCCTCAAAAGGAAATGTGTGTGTGGGGGGGTGCTGACTGGGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAGACCCTCAAAAGGAAATGTGTGTGTGGGGGGGTGCTGACTGGGCA  300

seq1  AAGTGGAGAAAAGTCTGCCACATGAGTGTGAAGATCTGAATTTGGATACC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGGAGAAAAGTCTGCCACATGAGTGTGAAGATCTGAATTTGGATACC  350

seq1  CTGCATCAGCTCACACACACACACACACACACAGAGGGAGGGAAGAGAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCATCAGCTCACACACACACACACACACACAGAGGGAGGGAAGAGAGG  400

seq1  AGGGAAAAAGGAAGGAAGTTAGAAGGGATGGAGGGTG  437
      |||||||||||||||||||||||||||||||||||||
seq2  AGGGAAAAAGGAAGGAAGTTAGAAGGGATGGAGGGTG  437

seq1: chr2_69572652_69573521
seq2: B6Ng01-177L05.g_66_956 (reverse)

seq1  --------------------TACCATCCACTACTGTACCC-AGCTTTCT-  28
                          | ||||| | |||||||||| |||||||| 
seq2  TACCATCCACCCACATCAGTTCCCATCAATTACTGTACCCAAGCTTTCTA  50

seq1  ATGTGGATTCTAGGGATCAAACTCAAGCTTGTACACCAAGTATTTTATCT  78
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGT-GATTCTAGGGATCAAACTCAAGCTTGTACACCAAGTATTTTATCT  99

seq1  TTAAGAGATTTTATATACCAGTATGTCTCTACGTAACCAAATACCAGGCT  128
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TT-AGAGATTTTATATACCAGTATGTCTCTACGTAACCAAATACCAGGCT  148

seq1  TCTAACTACATAGTTTTGAGGTTGACCTTGAGAATAAAAGAGAGGTAGGG  178
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAACTACATAGTTTTGAGGTTGACCTTGAGAATAAAAGAGAGGTAGGG  198

seq1  GTACTTGCAAAAAATGCATTGAACAAGTGCTTTCTTTAGATTCAGGTGAG  228
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTTGCAAAAAATGCATTGAACAAGTGCTTTCTTTAGATTCAGGTGAG  248

seq1  TTTGTTTTGAAAGTCTCTTGATCAGGGTCCTTGAACCCCATCTTAACTTC  278
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTTTGAAAGTCTCTTGATCAGGGTCCTTGAACCCCATCTTAACTTC  298

seq1  TCCAGTACATGTAATTATTATGCTCTTGTTTGAGGTTGACCCAGTTTAA-  327
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  TCCAGTACATGTAATTATTATGCTCTTGTTTGAGGTTGACCCAGTTTAAT  348

seq1  TTCAACTTTTCTTCAACACAAAATTTTATTCAATATCACAGATAACAAGC  377
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAACTTTTCTTCAACACAAAATTTTATTCAATATCACAGATAACAAGC  398

seq1  TCAAAAACCTAGAGTAGTTGAATAACATGAGTAAGCCTGTTGGAACATAG  427
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAAACCTAGAGTAGTTGAATAACATGAGTAAGCCTGTTGGAACATAG  448

seq1  AATCTCAGCTATTAAAACCTGTGTTGAAGAAAACAGGAACACTAAGTACT  477
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTCAGCTATTAAAACCTGTGTTGAAGAAAACAGGAACACTAAGTACT  498

seq1  AGTTACTTATTCCATAAACTAGATACTATCATTTTCAGATATTCCAGAGA  527
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTACTTATTCCATAAACTAGATACTATCATTTTCAGATATTCCAGAGA  548

seq1  GATTTGAAAATTGGATGCAGAAGTACCTACAACTACATGTTGGCAGTTAA  577
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTGAAAATTGGATGCAGAAGTACCTACAACTACATGTTGGCAGTTAA  598

seq1  TTTCTAAAATATATGAAATTAAGTGGACTGTTTCTATTCATGTTCAGCAA  627
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTAAAATATATGAAATTAAGTGGACTGTTTCTATTCATGTTCAGCAA  648

seq1  ATATATCTCAGAGCCATCAGACTGACTGTTCCCACCTCTCTCAATTCCTC  677
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATCTCAGAGCCATCAGACTGACTGTTCCCACCTCTCTCAATTCCTC  698

seq1  TAAAACCCTCCACGTTAACTGTTTAAAAGGTTAGGGTGAGGCCTGAGAGA  727
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAACCCTCCACGTTAACTGTTTAAAAGGTTAGGGTGAGGCCTGAGAGA  748

seq1  TTCAGTGGTTAAGCGCACTGACTGCTCTTCCAGAGGTGCTGAGTTCAATT  777
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGTGGTTAAGCGCACTGACTGCTCTTCCAGAGGTGCTGAGTTCAATT  798

seq1  CTCAGCAACCACATGTTGGCTCACAACCATCTGTAATGGGATCCCATGCC  827
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGCAACCACATGTTGGCTCACAACCATCTGTAATGGGATCCCATGCC  848

seq1  CTCTTCAGATGTGTCTGAAGATAGCTACAGTGTACTTGAATTC  870
      |||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTCAGATGTGTCTGAAGATAGCTACAGTGTACTTGAATTC  891