BAC Information

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BAC

Clone NameB6Ng01-177O04
Chromosome2 (Build37)
Map Location 85,126,315 - 85,127,157
singlet/doubletsinglet
Overlap genenone
Upstream geneCalcrl, Tfpi, LOC672763, Ctnnd1, 2700094K13Rik, Txndc14, Med19, Zdhhc5, Clp1, Ypel4, Serping1, Ube2l6, Smtnl1, Timm10, Slc43a1, Rtn4rl2, Slc43a3, Prg2, Prg3, P2rx3, Ssrp1, Tnks1bp1, Agtrl1, LOC625033, Lrrc55
Downstream geneOlfr987, GA_x5J8B7W531T-1241080-1240524, Olfr988, GA_x5J8B7W531T-1286425-1285652, Olfr990-ps1, Olfr991-ps1, Olfr992, Olfr993, Olfr994, Olfr995, 4833423E24Rik, Olfr996, Olfr997-ps1, Olfr998, Olfr999-ps1, Olfr1000, Olfr1001-ps1, Olfr1002, GA_x5J8B7W531T-1558688-1559570, Olfr1004-ps1, Olfr154, GA_x5J8B7W531T-1577060-1577325, Olfr1006, GA_x5J8B7W531T-1588603-1588734, Olfr1008, Olfr1009, Olfr1010, Olfr1012, Olfr1013, Olfr1014, Olfr1015, Olfr1016, GA_x5J8B7W3KVV-518538-519236, Olfr1018, Olfr1019, Olfr1020, Olfr1021-ps1, Olfr1022, Olfr1023, Olfr1024, Olfr1025-ps1, Olfr1026, Olfr1027-ps1, Olfr1028, Olfr1029, Olfr1030, Olfr1031, Olfr1032, LOC100042075, Olfr1033, Olfr1034, Olfr1533-ps1, Olfr1035-ps1, Olfr1036, Olfr1037, LOC100041372, Olfr1038, Olfr1039, Olfr1040, GA_x5J8B7W3KVV-170014-170572, Olfr1042, Olfr1043, Olfr1044, Olfr52, Olfr1045, Olfr1046, Olfr1047, Olfr1048, Olfr1049, Olfr1050-ps1, Olfr1051, GA_x5J8B7W3KVV-25848-25992
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-177O04.bB6Ng01-177O04.g
ACCGA005030GA005031
length1,158847
definitionB6Ng01-177O04.b B6Ng01-177O04.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggctgagaagcacctgaaaaaatg
ttcagcatccttaatcatcagagaaatgcaaatcaaaacaaccctgagat
tccatctcacaccagtcagaatagctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaagcttgtacaaccactctggaaatcagtctggcggttcctta
gaaaattggacatagtactacctgaggatcccgcaatacctctcctgggc
atatatccagaagatgtcccaaccagtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gtccttcaacagaggaatggatacagaaaatgtggtagatttacaaaatg
gagtactactcaactattaaaaacaataaatttatgaaattcttaggcaa
atggatggatctggaggatatcatcctgagtgaggtaacccaatcacaaa
agaatgcatggtatgcactcactgataagtggatattagcccagaaactt
agaatatgcaaaatacaatttccaaacacatgaaactcaagaagaaggaa
gaccaaagtgtagatactttgttcctccttggaatgggtgacaaaatacc
cgtagaaggagttacagagacagagtctggagctgagacgggaggaagga
ccatccagagactgccccacccaggaatcttcccagaaacagccactaaa
cccatacactattgcatatgtcagcaagattttgctgacagaaccctgat
aatagctgtttcttgtgagtctctgccagtgcctggcaaatatagaagtg
gatgatcacagtcatcttattaggatggaaccacaggcccccaatggagg
agaatagagaaaggtaccaaaggagcagagggtcttgcatcctataggag
gaccacatatgaactactagtattcccgaagctcatgtctctagctgcat
atatagcgaagaatgaacatccgccgtcattggggagggaagtctgcctg
ccagatctaatggccagtacggtatccaagccgaacgaattgggtggctt
ggggaacc
gaattccatcatatagaggaaagtgaagctgagagttgaagaaaagaaat
ccttgatgattttgcttgggatgtgggttgaattgtgcccagtggtaaat
ttaactcctgacacgtacaaaacagatacctcacaccaaagcagctatga
gcatgcctcatgtattagttttttgggggttgtcagcaaaagtactatta
atacaacctgggaggcttaaaataacagaaacaattgtttcataacccag
aggttagatgtcccaattcagagacagactcatggataggaactgagttg
tgcttccatcaatgtattgaagctataacttttttttgcaaaggagtttc
atttttgaaaatatcatatgtgcattcaatgaagtatgatctcatttacc
ccaaattacttttctaaacatgctcctcccaactttgtttctccccctcc
ctctgatagtctaagtctagttagtgctgccaatatattcataggtgcaa
ccaccctctgcagcataaacaataccttagaaaagaatgagccacacctt
agaaaagaatgagtctcccttccccagcaactctccactgtctggaggtc
agctatttcatctatgacgggattttgggtggcttgatttggttcaggtc
ttacatccagtaaacagcatttcatggcatccaaacctcatcctctatct
cttacattctactcatattatcttctgtgatgacccttgggctttggtga
gggtggtttgatatagtgccctgtttagagctgaatactcagtgttctta
gtcctcagtattttaagcagttataatcttctctttttgactggtac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_85126315_85127157
seq2: B6Ng01-177O04.g_61_907

seq1  GAATTCCATCATATAGAGGAAAGTGAAGCTGAGAGTTGAAGAAAAGAAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATCATATAGAGGAAAGTGAAGCTGAGAGTTGAAGAAAAGAAAT  50

seq1  CCTTGATGATTTTGCTTGGGATGTGGGTTGAATTGTGCCCAGTGGTAAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGATGATTTTGCTTGGGATGTGGGTTGAATTGTGCCCAGTGGTAAAT  100

seq1  TTAACTCCTGACACGTACAAAACAGATACCTCACACCAAAGCAGCTATGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACTCCTGACACGTACAAAACAGATACCTCACACCAAAGCAGCTATGA  150

seq1  GCATGCCTCATGTATTAGTTTTTTGGGGGTTGTCAGCAAAAGTACTATTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGCCTCATGTATTAGTTTTTTGGGGGTTGTCAGCAAAAGTACTATTA  200

seq1  ATACAACCTGGGAGGCTTAAAATAACAGAAACAATTGTTTCATAACCCAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAACCTGGGAGGCTTAAAATAACAGAAACAATTGTTTCATAACCCAG  250

seq1  AGGTTAGATGTCCCAATTCAGAGACAGACTCATGGATAGGAACTGAGTTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTAGATGTCCCAATTCAGAGACAGACTCATGGATAGGAACTGAGTTG  300

seq1  TGCTTCCATCAATGTATTGAAGCTATAACTTTTTTTTGCAAAGGAGTTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTCCATCAATGTATTGAAGCTATAACTTTTTTTTGCAAAGGAGTTTC  350

seq1  ATTTTTGAAAATATCATATGTGCATTCAATGAAGTATGATCTCATTTACC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTGAAAATATCATATGTGCATTCAATGAAGTATGATCTCATTTACC  400

seq1  CCAAATTACTTTTCTAAACATGCTCCTCCCAACTTTGTTTCTCCCCCTCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAATTACTTTTCTAAACATGCTCCTCCCAACTTTGTTTCTCCCCCTCC  450

seq1  CTCTGATAGTCTAAGTCTAGTTAGTGCTGCCAATATATTCATAGGTGCAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGATAGTCTAAGTCTAGTTAGTGCTGCCAATATATTCATAGGTGCAA  500

seq1  CCACCCTCTGCAGCATAAACAATACCTTAGAAAAGAATGAGCCACACCTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCCTCTGCAGCATAAACAATACCTTAGAAAAGAATGAGCCACACCTT  550

seq1  AGAAAAGAATGAGTCTCCCTTCCCCAGCAACTCTCCACTGTCTGGAGGTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAGAATGAGTCTCCCTTCCCCAGCAACTCTCCACTGTCTGGAGGTC  600

seq1  AGCTATTTCATCTATGACGGGATTTTGGGTGGCTTGATTTGGTTCAGGTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTATTTCATCTATGACGGGATTTTGGGTGGCTTGATTTGGTTCAGGTC  650

seq1  TTACATCCAGTAAACAGCATTTCATGGCATCCAAACCTCATCCTCTATCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACATCCAGTAAACAGCATTTCATGGCATCCAAACCTCATCCTCTATCT  700

seq1  CTTACATTCTACTCATATTATCTTCTGTGATGACCCTTGGGCTTTGGTGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACATTCTACTCATATTATCTTCTGTGATGACCCTTGGGCTTTGGTGA  750

seq1  GGGTGGTTTGATATAGGTGCCCTGTTTAGAGCTGAATACTCAGTG-TCTT  799
      ||||||||||||||| ||||||||||||||||||||||||||||| ||||
seq2  GGGTGGTTTGATATA-GTGCCCTGTTTAGAGCTGAATACTCAGTGTTCTT  799

seq1  AGT-CTCAGTATTTTAAGCAGTTATA----TCTCTCTTTTGACTGGTAC  843
      ||| ||||||||||||||||||||||    ||||| |||||||||||||
seq2  AGTCCTCAGTATTTTAAGCAGTTATAATCTTCTCT-TTTTGACTGGTAC  847