BAC Information

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BAC

Clone NameB6Ng01-178G12
Chromosome2 (Build37)
Map Location 100,002,889 - 100,004,066
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC621386, LOC668702
Downstream geneLOC100042907, LOC241572, LOC668705
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-178G12.bB6Ng01-178G12.g
ACCGA005404GA005405
length1,1851,102
definitionB6Ng01-178G12.b B6Ng01-178G12.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttatctccttatttaaagctgacattgggaaataaaattcaag
caagaaaatttcaagtggctttattagtagagataatagcaggcttccca
ctcagtaatttctttttctgaatacttaatatgaaaggctttgagcagaa
attttttcagtatgtctttttcagtaagcacactggtgaaaacacaagct
gaatgttctgtcaggggaagcatagccttacttacttcatccatcttaag
attacagtcgacagcttggcttcttgagtgttaaggaatgacataaatgt
tattgccattcatctcttatagcagcatgtgggtatcagagacacagaac
agctactgtttaatattgctttggaatattaaatgccacacattttgtat
ttgttaactcaatcagttcttaggtcaacattgtgaggagaggcccactt
cttttcccattttaagaataaaatgaagctgaggtttaatagttccataa
atagaacatgtttctaggtatgacttatataagataattttcaaagtatc
tgtcaaaaatatattcaaaatctaaaatagattatgtttaaataattaaa
gaaagtgatatgatttatcatctaccagtataaaaataattattcacttg
aaacttaatttatttatatatttaatttcatgtgtctccgtatgtgcatg
tgtatatgtctatatgtatagaaggccagaatatggccttttatcaaggt
ctaaatgatttgtgcaggaaaattttgctgaatgtttgttacccttactg
cctattcctcagaagctgattctcactctgaacccaaaccttattttttc
ttaatgtgactggaagccaccaaggtccagctgtcaacttgtctcagctg
tcaacaatttgggatgcacatggagaagactctgactttttctgtgggtg
ctaggtctctggtcctcatggaaatgaagcaactactcctaacctctgaa
ccattgtacacatctcaaaataagaatattttaataaatatcagaatgta
aactgacattggaatataacagcaattagctatattattaatttaaaggg
cttagccagcacaattgattacaattgatctttctgatgttttaagaatt
tgttctgcacaggaattggccaatgctgttacttt

gaattcataacagaggaatctcaatggctgagatacacttaaagaaatgt
tcacagtccagcgtgatcagggaaatgaaaataaaaatgaccctgagatt
ctaccttatacaaaacagattggctaagaacaaaacctcaggtggcagta
catgttgctgagtatgtggagaaagagaaatactcctccattgctggtgt
tattgcaaagtgatacaaccactctgcaaattaagctagatgatcttcag
aaaattggaaatagagcttcctgaatacgcagctatatcactcttgggca
tatacccaaaagatgctccatcatggcacaggggcacatgtttattgtac
cttgtttgtgatagccagaagctggaaacaactcagatgttccacaatga
aagaatggatactgaatatgtggtttatttacacagaggaatagtactca
gctattaagaatgagaacatcatgatattttcaggaaaataaatggaatt
aaaaatctcatcctgaataaattaagtcaaacccaaaggtatatgcacgg
tatgtgctcactaataagttgatattagtcaaaaaaaaaaaaaagtacag
aataccaaggataaaatccacagaactcaagaaggctcacaagccaaagg
gcccaagtaaggactcctcaatcctacttgggagggaaaaaagcaattac
agggggaagtggaatggatggacctttgtgggagaggagacaggtagggg
aaaaggggaacatcatcatgcattagagggaacaggtctgaagccctgag
aatcaccagaaagaatggaaaaggtcaaccttgggtggtaggaggttgca
agaacctctagagtgtaccagaggcctgggaggtgagagactttcaggat
caagggaagcattacatgagtgcccttacagttggggaaagggtacttgt
agagttcaccttcagtagagacgagcatcaagtgatgatgctgttgcatt
ccagccaaaaatcttgacagacttgtactttaagaacttacgacaaatgt
agagagctgagaaagtggtccagtactgaccattggaacagctatggtag
tc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_100002889_100004066
seq2: B6Ng01-178G12.b_43_1227 (reverse)

seq1  AAAGTAACAGCA-TGGCCAA-TCCTGTGCAGACAATATCTTTAAAACATC  48
      |||||||||||| ||||||| |||||||||||  | ||  ||||||||||
seq2  AAAGTAACAGCATTGGCCAATTCCTGTGCAGAACAAATTCTTAAAACATC  50

seq1  CAGAAGATCAATGTTAAATCAAATGTGCT-GCTAAGCCCTTT-AATTAAT  96
         ||||||||| |  |||||| |||||| |||||||||||| |||||||
seq2  AGAAAGATCAAT-TGTAATCAATTGTGCTGGCTAAGCCCTTTAAATTAAT  99

seq1  -ATATAGCTTAATTGCTTGTATATTCCAATGTCAGTTTACATTCTGATAT  145
       ||||||| ||||||||  |||||||||||||||||||||||||||||||
seq2  AATATAGC-TAATTGCTGTTATATTCCAATGTCAGTTTACATTCTGATAT  148

seq1  TTAT--AAATA-TCT--ATTTGAGATGTGTACAAATGGTTCAGAGGTTAG  190
      ||||  ||||| |||   |||||||||||||| |||||||||||||||||
seq2  TTATTAAAATATTCTTATTTTGAGATGTGTAC-AATGGTTCAGAGGTTAG  197

seq1  GAGTAGTTGCTTCATTTCCATGAGGACCAGAGACCTAGCACCCACAGAAA  240
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTAGTTGCTTCATTTCCATGAGGACCAGAGACCTAGCACCCACAGAAA  247

seq1  AAGTCAGAGTCTTCTCCATGTGCATCCCAAATTGTTGACAGCTGAGACAA  290
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCAGAGTCTTCTCCATGTGCATCCCAAATTGTTGACAGCTGAGACAA  297

seq1  GTTGACAGCTGGACCTTGGTGGCTTCCAGTCACATTAAGAAAAAATAAGG  340
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGACAGCTGGACCTTGGTGGCTTCCAGTCACATTAAGAAAAAATAAGG  347

seq1  TTTGGGTTCAGAGTGAGAATCAGCTTCTGAGGAATAGGCAGTAAGGGTAA  390
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGGTTCAGAGTGAGAATCAGCTTCTGAGGAATAGGCAGTAAGGGTAA  397

seq1  CAAACATTCAGCAAAATTTTCCTGCACAAATCATTTAGACCTTGATAAAA  440
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACATTCAGCAAAATTTTCCTGCACAAATCATTTAGACCTTGATAAAA  447

seq1  GGCCATATTCTGGCCTTCTATACATATAGACATATACACATGCACATACG  490
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCATATTCTGGCCTTCTATACATATAGACATATACACATGCACATACG  497

seq1  GAGACACATGAAATTAAATATATAAATAAATTAAGTTTCAAGTGAATAAT  540
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACACATGAAATTAAATATATAAATAAATTAAGTTTCAAGTGAATAAT  547

seq1  TATTTTTATACTGGTAGATGATAAATCATATCACTTTCTTTAATTATTTA  590
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTTATACTGGTAGATGATAAATCATATCACTTTCTTTAATTATTTA  597

seq1  AACATAATCTATTTTAGATTTTGAATATATTTTTGACAGATACTTTGAAA  640
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATAATCTATTTTAGATTTTGAATATATTTTTGACAGATACTTTGAAA  647

seq1  ATTATCTTATATAAGTCATACCTAGAAACATGTTCTATTTATGGAACTAT  690
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATCTTATATAAGTCATACCTAGAAACATGTTCTATTTATGGAACTAT  697

seq1  TAAACCTCAGCTTCATTTTATTCTTAAAATGGGAAAAGAAGTGGGCCTCT  740
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACCTCAGCTTCATTTTATTCTTAAAATGGGAAAAGAAGTGGGCCTCT  747

seq1  CCTCACAATGTTGACCTAAGAACTGATTGAGTTAACAAATACAAAATGTG  790
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCACAATGTTGACCTAAGAACTGATTGAGTTAACAAATACAAAATGTG  797

seq1  TGGCATTTAATATTCCAAAGCAATATTAAACAGTAGCTGTTCTGTGTCTC  840
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCATTTAATATTCCAAAGCAATATTAAACAGTAGCTGTTCTGTGTCTC  847

seq1  TGATACCCACATGCTGCTATAAGAGATGAATGGCAATAACATTTATGTCA  890
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATACCCACATGCTGCTATAAGAGATGAATGGCAATAACATTTATGTCA  897

seq1  TTCCTTAACACTCAAGAAGCCAAGCTGTCGACTGTAATCTTAAGATGGAT  940
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTAACACTCAAGAAGCCAAGCTGTCGACTGTAATCTTAAGATGGAT  947

seq1  GAAGTAAGTAAGGCTATGCTTCCCCTGACAGAACATTCAGCTTGTGTTTT  990
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTAAGTAAGGCTATGCTTCCCCTGACAGAACATTCAGCTTGTGTTTT  997

seq1  CACCAGTGTGCTTACTGAAAAAGACATACTGAAAAAATTTCTGCTCAAAG  1040
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCAGTGTGCTTACTGAAAAAGACATACTGAAAAAATTTCTGCTCAAAG  1047

seq1  CCTTTCATATTAAGTATTCAGAAAAAGAAATTACTGAGTGGGAAGCCTGC  1090
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTCATATTAAGTATTCAGAAAAAGAAATTACTGAGTGGGAAGCCTGC  1097

seq1  TATTATCTCTACTAATAAAGCCACTTGAAATTTTCTTGCTTGAATTTTAT  1140
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTATCTCTACTAATAAAGCCACTTGAAATTTTCTTGCTTGAATTTTAT  1147

seq1  TTCCCAATGTCAGCTTTAAATAAGGAGATAAAGAATTC  1178
      ||||||||||||||||||||||||||||||||||||||
seq2  TTCCCAATGTCAGCTTTAAATAAGGAGATAAAGAATTC  1185


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