MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-178K05
Chromosome	2 (Build37)
Map Location	75,263,436 - 75,426,250
singlet/doublet	doublet
Overlap gene	LOC100040324
Upstream gene	Lnp, LOC100040519, Evx2, Hoxd13, Hoxd12, Hoxd11, Hoxd10, Hoxd9, Hoxd8, 1700109F18Rik, Hoxd3, Hoxd4, LOC667804, Hoxd1, Mtx2, LOC667817, A330043C09Rik, LOC667739, LOC545423
Downstream gene	LOC667828, Hnrpa3, Nfe2l2, E030042O20Rik, LOC623453, Agps, Ttc30b, Ttc30a2, Ttc30a1, Pde11a, Cyct, Drbp1, Osbpl6
Link	Open Mouse BAC browser

Click to get alignment info.

name	Lnp (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69605 MGI:1918115
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040519 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040519
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 90 ESTs, 6 Proteins

name	Evx2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14029 MGI:95462
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Hoxd13 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:15433 MGI:96205
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Hoxd12 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:15432 MGI:96204
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Hoxd11 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:15431 MGI:96203
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Hoxd10 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:15430 MGI:96202
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Hoxd9 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:15438 MGI:96210
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Hoxd8 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:15437 MGI:96209
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	1700109F18Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:73429 MGI:1923875
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs

name	Hoxd3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:15434 MGI:96207
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Hoxd4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:15436 MGI:96208
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC667804 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667804
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs

name	Hoxd1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:15429 MGI:96201
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mtx2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:53375 MGI:1859652
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC667817 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667817
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	A330043C09Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:329430 MGI:2685671
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs

name	LOC667739 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667739
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 12 mRNAs, 1686 ESTs, 7 Proteins

name	LOC545423 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:545423
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 mRNAs, 1081 ESTs, 10 Proteins

name	LOC100040324 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040324
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins

name	LOC667828 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667828
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	Hnrpa3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:229279 MGI:1917171
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Nfe2l2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18024 MGI:108420
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	E030042O20Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:320474 MGI:2444099
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 7 ESTs

name	LOC623453 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:623453
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 mRNAs, 229 ESTs, 3 Proteins pseudo : _no_value

name	Agps (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:228061 MGI:2443065
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ttc30b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:72421 MGI:1919671
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ttc30a2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:620631 MGI:3700200
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ttc30a1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:78802 MGI:1926052
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pde11a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:241489 MGI:3036251
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cyct (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13067 MGI:88579
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Drbp1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:241490 MGI:2387367
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Osbpl6 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:99031 MGI:2139014
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Lnp (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:84872192 GeneID:69605 MGI:1918115
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : limb and neural patterns transcript_id : NM_027133.2

name	LOC100040519 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149249844 GeneID:100040519
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 88 ESTs, 6 Proteins product : similar to L23 mitochondrial-related protein, transcript variant 2 transcript_id : XM_001475211.1

name	LOC100040519 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149249842 GeneID:100040519
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 89 ESTs, 6 Proteins product : similar to L23 mitochondrial-related protein, transcript variant 1 transcript_id : XM_001475192.1

name	Evx2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118131041 GeneID:14029 MGI:95462
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : even skipped homeotic gene 2 homolog transcript_id : NM_007967.2

name	Hoxd13 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:120586993 GeneID:15433 MGI:96205
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : homeo box D13 transcript_id : NM_008275.2

name	Hoxd12 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:121583907 GeneID:15432 MGI:96204
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : homeo box D12 transcript_id : NM_008274.2

name	Hoxd11 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6680256 GeneID:15431 MGI:96203
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : homeo box D11 transcript_id : NM_008273.1

name	Hoxd10 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802469 GeneID:15430 MGI:96202
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : homeo box D10 transcript_id : NM_013554.3

name	Hoxd9 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31542960 GeneID:15438 MGI:96210
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : homeo box D9 transcript_id : NM_013555.2

name	Hoxd8 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:112807183 GeneID:15437 MGI:96209
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : homeo box D8 transcript_id : NM_008276.2

name	1700109F18Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94367053 GeneID:73429 MGI:1923875
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs product : RIKEN cDNA 1700109F18 gene transcript_id : XM_992510.1

name	Hoxd3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:126517501 GeneID:15434 MGI:96207
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : homeo box D3 transcript_id : NM_010468.2

name	Hoxd4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6754237 GeneID:15436 MGI:96208
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : homeo box D4 transcript_id : NM_010469.1

name	LOC667804 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:94367058 GeneID:667804
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs product : similar to hCG17447 transcript_id : XM_992575.1

name	Hoxd1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:112983631 GeneID:15429 MGI:96201
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : homeo box D1 transcript_id : NM_010467.2

name	Mtx2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142380213 GeneID:53375 MGI:1859652
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : metaxin 2 transcript_id : NM_016804.3

name	A330043C09Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149249846 GeneID:329430 MGI:2685671
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs product : RIKEN cDNA A330043C09 gene transcript_id : XM_001475470.1

name	LOC667739 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149249848 GeneID:667739
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 12 mRNAs, 1686 ESTs, 7 Proteins product : similar to ribosomal protein S6, transcript variant 2 transcript_id : XM_001003926.2

name	LOC545423 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149249849 GeneID:545423
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 mRNAs, 1081 ESTs, 10 Proteins product : similar to ribosomal protein L21 transcript_id : XM_619762.4

name	LOC100040324 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149249836 GeneID:100040324
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins product : similar to Ubtf protein transcript_id : XM_001474502.1

name	Hnrpa3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:37674276 GeneID:229279 MGI:1917171
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : heterogeneous nuclear ribonucleoprotein A3 transcript_id : NM_198090.1

name	Hnrpa3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31559915 GeneID:229279 MGI:1917171
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : heterogeneous nuclear ribonucleoprotein A3 transcript_id : NM_146130.2

name	Nfe2l2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:76573877 GeneID:18024 MGI:108420
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : nuclear factor, erythroid derived 2, like 2 transcript_id : NM_010902.3

name	E030042O20Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149249851 GeneID:320474 MGI:2444099
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 7 ESTs product : RIKEN cDNA E030042O20 gene transcript_id : XM_001475569.1

name	Agps (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:40254235 GeneID:228061 MGI:2443065
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : alkylglycerone phosphate synthase transcript_id : NM_172666.2

name	Ttc30b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:125988382 GeneID:72421 MGI:1919671
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : tetratricopeptide repeat domain 30B transcript_id : NM_028235.1

name	Ttc30a2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124487006 GeneID:620631 MGI:3700200
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : tetratricopeptide repeat domain 30A2 transcript_id : NM_001081228.1

name	Ttc30a1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:125988390 GeneID:78802 MGI:1926052
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : tetratricopeptide repeat domain 30A1 transcript_id : NM_030188.3

name	Pde11a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124486645 GeneID:241489 MGI:3036251
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : phosphodiesterase 11A transcript_id : NM_001081033.1

name	Cyct (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:116063576 GeneID:13067 MGI:88579
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cytochrome c, testis transcript_id : NM_009989.2

name	Drbp1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:91064873 GeneID:241490 MGI:2387367
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : developmentally regulated RNA binding protein 1 transcript_id : NM_153405.2

name	Osbpl6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:68131559 GeneID:99031 MGI:2139014
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : oxysterol binding protein-like 6 transcript_id : NM_145525.2

name	Lnp (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:32441290 CCDS:CCDS16137.1 GeneID:69605 MGI:1918115
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_process : GO:0007275 - development [Evidence IEA] codon_start : 1 note : lunapark product : limb and neural patterns protein_id : NP_081409.1

name	LOC100040519 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149249843 GeneID:100040519
definition	codon_start : 1 product : similar to L23 mitochondrial-related protein isoform 1 protein_id : XP_001475242.1

name	LOC100040519 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149249845 GeneID:100040519
definition	codon_start : 1 product : similar to L23 mitochondrial-related protein isoform 2 protein_id : XP_001475261.1

name	Evx2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6679713 CCDS:CCDS16138.1 GeneID:14029 MGI:95462
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0007275 - development [Evidence IEA]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA] codon_start : 1 product : even skipped homeotic gene 2 homolog protein_id : NP_031993.1

name	Hoxd13 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:120586994 CCDS:CCDS16139.1 GeneID:15433 MGI:96205
definition	GO_component : GO:0005634 - nucleus [Evidence IDA]; GO:0005667 - transcription factor complex [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0007275 - development [Evidence IEA]; GO:0030326 - embryonic limb morphogenesis [Evidence IMP]; GO:0009887 - organ morphogenesis [Evidence IEA]; GO:0007389 - pattern specification [Evidence IMP]; GO:0042127 - regulation of cell proliferation [Evidence IMP]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0001501 - skeletal development [Evidence IMP]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : homeobox D13 protein_id : NP_032301.2

name	Hoxd12 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:121583908 GeneID:15432 MGI:96204
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0005667 - transcription factor complex [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0007275 - development [Evidence IEA]; GO:0009887 - organ morphogenesis [Evidence IEA]; GO:0007389 - pattern specification [Evidence IEA]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0001501 - skeletal development [Evidence IMP]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : homeo box D12 protein_id : NP_032300.2

name	Hoxd11 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6680257 CCDS:CCDS16140.1 GeneID:15431 MGI:96203
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0005667 - transcription factor complex [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0007275 - development [Evidence IEA]; GO:0001759 - induction of an organ [Evidence IGI]; GO:0001656 - metanephros development [Evidence IGI]; GO:0009887 - organ morphogenesis [Evidence IEA]; GO:0007389 - pattern specification [Evidence IEA]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0001501 - skeletal development [Evidence IMP]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : homeo box D11 protein_id : NP_032299.1

name	Hoxd10 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31560501 CCDS:CCDS16141.1 GeneID:15430 MGI:96202
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0005667 - transcription factor complex [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0007275 - development [Evidence IEA]; GO:0009887 - organ morphogenesis [Evidence IEA]; GO:0007389 - pattern specification [Evidence IEA]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0001501 - skeletal development [Evidence IMP]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : homeo box D10 protein_id : NP_038582.2

name	Hoxd9 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7305153 CCDS:CCDS16142.1 GeneID:15438 MGI:96210
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0005667 - transcription factor complex [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA]; GO:0016563 - transcriptional activator activity [Evidence IEA] GO_process : GO:0007275 - development [Evidence IEA]; GO:0009887 - organ morphogenesis [Evidence IEA]; GO:0007389 - pattern specification [Evidence IEA]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : homeo box D9 protein_id : NP_038583.1

name	Hoxd8 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:112807184 CCDS:CCDS16143.1 GeneID:15437 MGI:96209
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0005667 - transcription factor complex [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0007275 - development [Evidence IEA]; GO:0009887 - organ morphogenesis [Evidence IEA]; GO:0007389 - pattern specification [Evidence IEA]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : homeo box D8 protein_id : NP_032302.2

name	1700109F18Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94367054 GeneID:73429 MGI:1923875
definition	codon_start : 1 product : hypothetical protein LOC73429 protein_id : XP_997604.1

name	Hoxd4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6754238 CCDS:CCDS16145.1 GeneID:15436 MGI:96208
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0005667 - transcription factor complex [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0007275 - development [Evidence IEA]; GO:0009887 - organ morphogenesis [Evidence IEA]; GO:0007389 - pattern specification [Evidence IEA]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 exception : mismatches in translation product : homeo box D4 protein_id : NP_034599.1

name	Hoxd3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:126517502 GeneID:15434 MGI:96207
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0005667 - transcription factor complex [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0007275 - development [Evidence IEA]; GO:0009887 - organ morphogenesis [Evidence IEA]; GO:0007389 - pattern specification [Evidence IEA]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : homeo box D3 protein_id : NP_034598.2

name	LOC667804 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:94367059 GeneID:667804
definition	codon_start : 1 product : similar to hCG17447 protein_id : XP_997669.1

name	Hoxd1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:112983632 CCDS:CCDS16147.1 GeneID:15429 MGI:96201
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0005667 - transcription factor complex [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0007275 - development [Evidence IEA]; GO:0009887 - organ morphogenesis [Evidence IEA]; GO:0007389 - pattern specification [Evidence IEA]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : homeo box D1 protein_id : NP_034597.2

name	Mtx2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31543274 CCDS:CCDS16148.1 GeneID:53375 MGI:1859652
definition	GO_component : GO:0016020 - membrane [Evidence IEA]; GO:0005739 - mitochondrion [Evidence IDA]; GO:0019867 - outer membrane [Evidence IEA] GO_process : GO:0015031 - protein transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 exception : mismatches in translation product : metaxin 2 protein_id : NP_058084.2

name	A330043C09Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149249847 GeneID:329430 MGI:2685671
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001475520.1

name	LOC667739 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:94367038 GeneID:667739
definition	codon_start : 1 product : hypothetical protein isoform 2 protein_id : XP_001003926.1

name	LOC545423 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:63487024 GeneID:545423
definition	codon_start : 1 product : hypothetical protein protein_id : XP_619762.1

name	LOC100040324 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149249837 GeneID:100040324
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001474552.1

name	Hnrpa3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:37674277 CCDS:CCDS16149.1 GeneID:229279 MGI:1917171
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0030529 - ribonucleoprotein complex [Evidence IEA] GO_function : GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA] codon_start : 1 note : isoform a is encoded by transcript variant a product : heterogeneous nuclear ribonucleoprotein A3 isoform a protein_id : NP_932758.1

name	Hnrpa3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31559916 CCDS:CCDS16149.1 GeneID:229279 MGI:1917171
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0030529 - ribonucleoprotein complex [Evidence IEA] GO_function : GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA] codon_start : 1 note : isoform b is encoded by transcript variant b product : heterogeneous nuclear ribonucleoprotein A3 isoform b protein_id : NP_666242.2

name	Nfe2l2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6754832 CCDS:CCDS16150.1 GeneID:18024 MGI:108420
definition	GO_component : GO:0005737 - cytoplasm [Evidence IPI]; GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0003677 - DNA binding [Evidence IDA] [Evidence IPI]; GO:0005515 - protein binding [Evidence IPI]; GO:0046983 - protein dimerization activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IDA]; GO:0030528 - transcription regulator activity [Evidence IGI]; GO:0016563 - transcriptional activator activity [Evidence IDA] GO_process : GO:0045941 - positive regulation of transcription [Evidence IDA]; GO:0045893 - positive regulation of transcription, DNA-dependent [Evidence IDA]; GO:0045995 - regulation of embryonic development [Evidence IGI]; GO:0045449 - regulation of transcription [Evidence IGI]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IDA]; GO:0006350 - transcription [Evidence IEA]; GO:0030968 - unfolded protein response [Evidence IDA] codon_start : 1 product : nuclear factor, erythroid derived 2, like 2 protein_id : NP_035032.1

name	E030042O20Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149249852 GeneID:320474 MGI:2444099
definition	codon_start : 1 product : hypothetical protein LOC320474 protein_id : XP_001475619.1

name	Agps (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27369960 CCDS:CCDS16151.1 GeneID:228061 MGI:2443065
definition	GO_component : GO:0005777 - peroxisome [Evidence ISS] [Evidence IEA] GO_function : GO:0008609 - alkylglycerone-phosphate synthase activity [Evidence IEA] [Evidence ISS]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006118 - electron transport [Evidence IEA]; GO:0008610 - lipid biosynthesis [Evidence ISS] [Evidence IEA] codon_start : 1 product : alkyldihydroxyacetone phosphate synthase protein_id : NP_766254.1

name	Ttc30b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:125988383 GeneID:72421 MGI:1919671
definition	GO_function : GO:0005488 - binding [Evidence IEA] codon_start : 1 note : novel tetratrico peptide repeat (TPR) containing protein product : tetratricopeptide repeat domain 30B protein_id : NP_082511.1

name	Ttc30a2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124487007 GeneID:620631 MGI:3700200
definition	codon_start : 1 note : novel tetratrico peptide repeat (TPR) containing protein product : tetratricopeptide repeat domain 30A2 protein_id : NP_001074697.1

name	Ttc30a1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:125988391 CCDS:CCDS16154.1 GeneID:78802 MGI:1926052
definition	GO_function : GO:0005488 - binding [Evidence IEA] codon_start : 1 note : tetratricopeptide repeat domain 30A; novel tetratrico peptide repeat (TPR) containing protein product : tetratricopeptide repeat domain 30A1 protein_id : NP_084464.3

name	Pde11a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124486646 GeneID:241489 MGI:3036251
definition	GO_function : GO:0004114 - 3',5'-cyclic-nucleotide phosphodiesterase activity [Evidence IEA]; GO:0003824 - catalytic activity [Evidence IEA] GO_process : GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 product : phosphodiesterase 11A protein_id : NP_001074502.1

name	Cyct (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6753560 CCDS:CCDS16156.1 GeneID:13067 MGI:88579
definition	GO_component : GO:0005746 - mitochondrial electron transport chain [Evidence IEA]; GO:0005739 - mitochondrion [Evidence IEA] GO_function : GO:0009055 - electron carrier activity [Evidence IEA]; GO:0020037 - heme binding [Evidence IEA]; GO:0005506 - iron ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA] GO_process : GO:0006118 - electron transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 product : cytochrome c, testis protein_id : NP_034119.1

name	Drbp1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:23510273 CCDS:CCDS16157.1 GeneID:241490 MGI:2387367
definition	GO_component : GO:0005737 - cytoplasm [Evidence ISS]; GO:0005634 - nucleus [Evidence ISS] [Evidence IEA] GO_function : GO:0000166 - nucleotide binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence ISS] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0030154 - cell differentiation [Evidence IEA]; GO:0007275 - development [Evidence IEA]; GO:0007399 - nervous system development [Evidence ISS] [Evidence IEA] codon_start : 1 note : dopamine receptor binding 1 product : developmentally regulated RNA binding protein 1 protein_id : NP_700454.1

name	Osbpl6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:68131560 CCDS:CCDS16158.1 GeneID:99031 MGI:2139014
definition	GO_function : GO:0003676 - nucleic acid binding [Evidence IEA] GO_process : GO:0006869 - lipid transport [Evidence IEA]; GO:0008202 - steroid metabolism [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 product : OSBP-related protein 6 protein_id : NP_663500.2

name	LOC667817 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667817
definition	number : 2 pseudo : _no_value

name	LOC667817 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667817
definition	number : 1 pseudo : _no_value

name	LOC667828 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667828
definition	number : 3 pseudo : _no_value

name	LOC667828 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667828
definition	number : 2 pseudo : _no_value

name	LOC667828 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667828
definition	number : 1 pseudo : _no_value

name	LOC623453 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149249853 GeneID:623453
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 mRNAs, 229 ESTs, 3 Proteins product : similar to proteolipid protein 2 pseudo : _no_value transcript_id : XR_032315.1

clone name	MSMg01-346M11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-435F11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-370K15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-340E14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-136N13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-158B14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-485O01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-419G05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-057F05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-336J03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-345N08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-169B06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-370E07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-141D19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-145E04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-288F07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-063L08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-488N02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-098E20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-104H23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-181F23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-541O05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-461L08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-349A14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-377A08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-541K17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-265E12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-433P15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-353M15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-095I07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-073P01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-320M11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-459C10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-065L07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-397G09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-375L17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-329M15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-326C06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-349A15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-449M24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-307E11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-298N21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-539E22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-392P10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-317D02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-137I17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-074D23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-071D12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-163G21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-131D15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-103O23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-386F22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-273O01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-289K11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-139K19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-436D24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-381P03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-332K10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-118O06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-351L02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-428H09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-350I17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-334E14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-349E21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-529G19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-328M02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-066K22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-141H21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-094G12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-394M18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-399A05
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-300E08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-140A15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-267C04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-126C21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-409M01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-262A08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-533I13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-180J18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-427C09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-527P09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-347C03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-176B04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-141O14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-378F19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-389P07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-278N17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-487O07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-378H08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-411K18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-500E05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-385H14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-485A12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-093I04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-357C08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-470L06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-148D20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-347I20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-317H08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-492L06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-402P20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-126G22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-294E09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-176I15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-041F05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-233N07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-147J07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-340J06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-214E10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-313P04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-287G03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-303E02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-137N12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-110J04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-080P21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-200C22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-242I05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-025A17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-127B24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-234J12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-021I11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-125E24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-152K14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-209C01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-105J20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-008J05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-270M10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-009I07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-177J08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-136N08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-276I06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-297A09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-080J22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-245L22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-336M03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-169O09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-077O17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-180E15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-104G07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-145L02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-227N14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-348O03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-262H09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-107M13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-228A02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-090B02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-082D11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-281L08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-183O19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-115K18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-190I16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-084P05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-149C21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-186H08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-020A20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-217B16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-216A21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-214O24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-180D07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-057F07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-334O22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-038P01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-315J05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-019C24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-296A12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-178K05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-127G12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-151J09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-143B20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-239K16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-170J10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-223B18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-229L10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-281C01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-120D19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-296L03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-292E03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-199F02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-150A24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-064G22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-281O18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-311P12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-107E05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-203A02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-123O14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-140M04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-240K06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-226A02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-227P05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-078E08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-269E08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-222P05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-203G21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-044B09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-186J01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-110E12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-034K17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-059I14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-295L15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-207N04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-254C02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-008B05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-068C09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-235J09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-155N15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-270N10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-020D04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-011I10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-293K09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-146I17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-221C15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-166D05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-146D18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-293I17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-066F23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-274J14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-107D23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-107D24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-057K10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-179L18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-157D07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-235N05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-183D24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-284B14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-162P12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-238J16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-152K15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-004M18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-198H08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-084H13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-269D18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-027N11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-210C01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-207N19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-293E11
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-178K05.b	B6Ng01-178K05.g
ACC	GA005569	GA005570
length	1,223	1,018
definition	B6Ng01-178K05.b	B6Ng01-178K05.g
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(75,263,436 - 75,264,661)	(75,425,208 - 75,426,250)
sequence	gaattctcccggtcttcctctttttaactttgttttcatgatgcagatta aatctgccaccctattactgattcattttcctaatttttcatgtctgcac catgccccagctgcaccaggctgataattgtggagcccagccctgatgat taacatcagaagaattaattatgcctgccattaaaattccgggttgcaca tggtgatcaagaaaaattaagtttctctaggcctctaaatcatttcacct ttgcaggaaaggatagagcctggacagctaggcggcagcctgtgttcctg ctgatgtcggaaccacatgccctttgtgtaattcaacgaaggctatcccg gcttcccccccacccccacccccacccccagatttggacgaaaagattta atgcttagaaaaataaagggaacctgaaagatattcttaatcttttgctt gagaagggggtgtgtgtaaaaacagtgcttgtcagcatctcagatgcttc tcctgaaatatctgttaaactaatctgtagaggaatacattccgcggaga aaagaaagacgacccttggaaagagctgatgaatcgagggtggcaagggg ctccagcctgacaatcattgtaagtagggagacaggaaatgttacttcaa gctgacaaaggctgcggcatttcttgggaataaattgatgacagaataaa aacagattcctcagatctttaggctaaataataatgagtaaaagacgccg gttgactgacgcatttccaaaatgattgttgcatgaggaacccaaaatgt attcggtgtaccctaaggtacagaatttactagagctgtagaggatgaga tgccctgcatttatcacgctctcttcctactctgtgttctgtttttaaat taccataataatgtatattacaggcatggctttcgaagtctacagaagga gtcgtattttgatgaacagatgtaaatatctttacaccaaatagtaaatc tctcactcacttctatgcaagagtatgcataagctatgcatcaatgggtt tcctcatacatttaataggtgataccgaaagatactatttcaatagatgc tcctttgtttagttcaagcggtagttaaatttactgggcaggtaacccac atacccactctcaaggtagatagtgagggtgtccagaaattggcagttcc atttattcagctatttccaggaa	gaattcttctttccagaacaggattgctttagtaagtagcaattatgttt acaatcttggaaaatgtatggtaggtagccattacatctcttacaaaccc acagtgagttagtattgtgggccaagagaacacatgtcggttggttttta agacgtctaattctttattcaaaactcagggccagtcagaaatgccagat gaaggggttataatgccaaagttaattttgttttgtcatatacaaagtag ttaatgtaaaaattattgattgatattctccctcttttaactcttttagg actcaatatttaaagcaaaactaatttatctaggtgttctactgcacaaa attaattctactgggacaggcgaggccaagcctcattatgaaacggttgg ttcccttgctgaaccagcctaagcaggttgctttagtttttcaaaattag gtacaacaaagaatttaacccttgagatgctggggaactggccttcagta ttatactacctgggccatgggatgggacaggagacatgtcttctcctgtg ggttctgcctaggacacaggtgaggtgaggtgatttatataccagggtat gtgttcattaaaaccagtgtttttcagccttcctaatgctgtgacccttt aatacagttcctcatgttgtgacgatcccaaccctaaaattattttcatt gctactgcatagctgtaattttgctactgttatgaattgtaatgtaagta tttttggagatagaagtttgccaaggggttcccactcacaggttaagaac cactgattaaaacaattaatcgaaatattccttggggcgtggtggcacac gccttttatcccagcactcgggagcagaggcagcggatttctgagtttga agtcagcctgtctacaaggtgagtccagacagcaggctatcagagaatct gttcaaaaaaacaaaaatatattatatatttctagtatgtaccactgtat ccagacctgcctaaaatg
quality values	Open. Hide. 58 47 27 22 62 62 54 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 44 51 59 62 62 62 62 62 45 51 32 32 35 39 46 54 42 35 54 62 59 59 59 59 62 62 62 62 62 62 62 59 62 59 59 62 49 49 59 62 62 59 62 62 62 62 59 62 62 59 59 62 62 62 62 62 62 54 54 49 49 54 54 62 62 59 59 62 62 54 62 62 62 62 54 62 62 54 62 59 62 62 62 62 54 62 62 59 62 62 62 62 62 59 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 54 49 54 62 62 62 62 62 54 59 62 62 59 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 59 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 54 42 62 62 52 62 62 62 62 62 62 62 62 49 42 62 62 62 62 52 62 62 62 62 62 62 58 58 54 58 58 58 54 49 58 58 58 58 52 58 52 54 58 58 58 54 58 58 54 58 58 58 58 58 58 58 50 54 41 54 58 58 58 58 58 58 54 58 44 44 47 52 49 58 52 58 54 52 26 58 54 58 52 58 58 58 52 58 58 58 58 54 54 58 58 54 41 45 37 52 54 58 58 58 54 47 58 49 51 50 54 58 58 53 54 58 51 51 58 50 48 42 29 43 42 33 58 46 58 53 50 49 58 37 50 49 58 58 53 51 58 46 20 44 58 53 46 58 58 39 50 58 51 52 50 51 50 35 34 41 58 46 52 46 58 58 58 53 53 42 53 58 35 33 39 52 40 46 52 32 58 32 52 53 36 36 49 27 51 39 35 34 58 50 50 39 49 42 39 53 50 51 51 41 50 58 58 58 43 39 51 27 31 50 58 27 54 31 52 50 52 32 53 49 49 39 39 50 23 40 52 53 47 25 31 54 54 22 26 46 41 36 47 50 42 41 40 35 25 39 53 53 29 53 32 32 27 49 44 16 50 54 30 30 53 29 33 32 47 32 19 53 29 51 34 17 7 33 42 33 46 19 14 34 9 40 40 22 38 53 53 25 54 53 22 33 33 27 21 39 28 40 42 40 32 45 20 42 35 24 32 13 28 52 26 26 18 45 40 47 38 32 40 31 29 52 53 34 31 32 29 28 39 34 52 32 33 31 39 23 42 30 39 35 38 34 31 31 28 31 15 43 18 16 32 22 46 13 51 51 51 19 21 46 29 18 12 26 28 31 25 34 31 41 28 36 23 30 43 25 33 21 17 27 7 26 21 30 12 36 23 17 30 31 37 31 38 48 37 31 13 32 31 21 34 35 32 26 28 12 28 39 20 21 30 29 24 18 30 18 27 31 33 46 48 33 27 31 23 29 31 24 21 13 18 31 21 32 19 19 41 29 26 29 34 37 25 44 21 26 19 13 20 25 24 44 27 21 32 25 23 37 44 22 25 27 25 14 14 18 27 27 31 24 11 18 9 6 7 8 18 10 18 17 29 26 17 32 31 10 18 14 32 15 18 26 18 33 13 15 23 31 23 17 32 17 21 18 13 9 7 8 43 11 26 48 15 20 14 19 4 4 8 4 7 10 32 48 16 10 15 7 20 10 5 7 6 17 10 5 6 17 11 16 47 11 8 6 3 8 19 7 6 23 38 28 20 24 13 8 4 4 17 20 10 7 6 5 7 16 20 9 17 9 14 9 9 4 7 6 6 3 7 8 17 8 7 7 28 9 15 6 20 27 10 16 27 6 6 2 1 2 14 14 3 1 9 15 5 3 3 4 23 7 7 17 5 5 4 12 29 11 7 19 9 10 9 18 5 8 12 3 2 2 5 21 8 11 5 6 6 6 4 15 10 8 7 4 7 5 4 2 11 26 3 2 1 2 2 2 5 3 3 2 5 12 5 24 14 10 3 4 7 8 4 10 5 16 6 9 17 4 7 5 4 4 17 16 3	Open. Hide. 62 44 56 47 62 62 62 62 62 62 62 56 56 44 10 28 38 32 40 26 43 49 54 59 62 62 62 62 62 59 62 62 42 62 62 54 54 59 62 62 62 62 62 62 62 59 62 62 62 59 62 62 62 62 62 62 62 62 62 62 59 62 62 62 59 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 59 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 54 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 51 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 49 47 47 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 56 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 47 47 62 62 62 54 48 62 62 62 62 38 49 43 62 62 62 62 62 58 58 58 54 58 58 58 58 54 58 58 45 54 54 58 58 58 48 58 49 54 41 58 58 50 49 54 52 47 54 52 58 54 39 54 54 58 54 42 54 52 58 54 40 58 58 52 54 52 54 46 58 54 46 58 58 58 58 41 36 51 49 58 53 51 50 50 49 51 52 58 58 54 51 53 41 53 52 58 52 58 58 58 50 40 39 30 42 51 51 50 46 58 47 46 50 49 54 37 52 51 50 51 39 28 58 44 58 58 43 34 50 52 50 53 31 52 49 46 50 58 52 52 52 50 58 27 50 53 42 58 39 41 34 52 37 31 49 44 25 47 50 58 51 41 52 58 58 45 37 31 37 37 54 54 32 38 34 53 37 49 32 39 34 39 42 52 40 32 53 52 25 45 53 49 37 32 40 28 54 54 44 32 35 45 32 41 32 51 23 31 40 42 39 52 53 33 37 33 29 40 52 37 51 23 35 53 32 40 40 31 53 53 52 47 31 32 53 18 35 23 36 36 45 42 21 40 51 34 34 23 37 23 32 32 36 46 31 26 26 28 51 34 28 33 35 35 22 31 14 25 27 33 26 27 31 25 42 29 30 33 25 31 29 31 31 21 22 27 46 46 33 28 21 18 20 23 25 24 29 38 33 46 46 26 22 24 31 22 29 23 24 27 31 46 46 37 21 30 19 26 19 6 27 31 24 18 10 6 29 24 28 32 23 31 39 14 32 29 26 38 34 11 13 21 13 11 29 26 27 44 20 12 7 6 22 8 31 10 22 23 9 12 6 6 24 13 9 44 27 32 21 21 29 9 37 36 24 9 5 7 20 13 27 28 27 15 11 29 18 15 19 8 8 10 23 34 7 9 14 19 17 6 22 7 23 8 25 4 5 16 20 25 8 5 14 6 12 7 10 3 3 3 14 9 7 17 4 10 11 18 6 3 4 14 21 17 34 28 19 14 3 20 29 27 27 20 8 4 6 5 4 4 4 12 9 21 7 5 22 7 9 10 27 7 7 7 5 27 16 13 25 25 8 8 6 22 9 13 28 5 4 5 4 16 16 16 18 9 6 13 13 7 25 26 22 13 3

Alignment Information

BAC End 1

BAC End 2

seq1: chr2_75263436_75264661
seq2: B6Ng01-178K05.b_43_1265

seq1  GAATTCTCCCGGTCTTCCTCTTTTTAACTTTGTTTTCATGATGCAGATTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCCGGTCTTCCTCTTTTTAACTTTGTTTTCATGATGCAGATTA  50

seq1  AATCTGCCACCCTATTACTGATTCATTTTCCTAATTTTTCATGTCTGCAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTGCCACCCTATTACTGATTCATTTTCCTAATTTTTCATGTCTGCAC  100

seq1  CATGCCCCAGCTGCACCAGGCTGATAATTGTGGAGCCCAGCCCTGATGAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCCCCAGCTGCACCAGGCTGATAATTGTGGAGCCCAGCCCTGATGAT  150

seq1  TAACATCAGAAGAATTAATTATGCCTGCCATTAAAATTCCGGGTTGCACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACATCAGAAGAATTAATTATGCCTGCCATTAAAATTCCGGGTTGCACA  200

seq1  TGGTGATCAAGAAAAATTAAGTTTCTCTAGGCCTCTAAATCATTTCACCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGATCAAGAAAAATTAAGTTTCTCTAGGCCTCTAAATCATTTCACCT  250

seq1  TTGCAGGAAAGGATAGAGCCTGGACAGCTAGGCGGCAGCCTGTGTTCCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCAGGAAAGGATAGAGCCTGGACAGCTAGGCGGCAGCCTGTGTTCCTG  300

seq1  CTGATGTCGGAACCACATGCCCTTTGTGTAATTCAACGAAGGCTATCCCG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATGTCGGAACCACATGCCCTTTGTGTAATTCAACGAAGGCTATCCCG  350

seq1  GCTTCCCCCCCACCCCCACCCCCACCCCCAGATTTGGACGAAAAGATTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCCCCCCCACCCCCACCCCCACCCCCAGATTTGGACGAAAAGATTTA  400

seq1  ATGCTTAGAAAAATAAAGGGAACCTGAAAGATATTCTTAATCTTTTGCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTTAGAAAAATAAAGGGAACCTGAAAGATATTCTTAATCTTTTGCTT  450

seq1  GAGAAGGGGGTGTGTGTAAAAACAGTGCTTGTCAGCATCTCAGATGCTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAGGGGGTGTGTGTAAAAACAGTGCTTGTCAGCATCTCAGATGCTTC  500

seq1  TCCTGAAATATCTGTTAAACTAATCTGTAGAGGAATACATTCCGCGGAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGAAATATCTGTTAAACTAATCTGTAGAGGAATACATTCCGCGGAGA  550

seq1  AAAGAAAGACGACCCTTGGAAAGAGCTGATGAATCGAGGGTGGCAAGGGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAAGACGACCCTTGGAAAGAGCTGATGAATCGAGGGTGGCAAGGGG  600

seq1  CTCCAGCCTGACAATCATTGTAAGTAGGGAGACAGGAAATGTTACTTCAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAGCCTGACAATCATTGTAAGTAGGGAGACAGGAAATGTTACTTCAA  650

seq1  GCTGACAAAGGCTGCGGCATTTCTTGGGAATAAATTGATGACAGAATAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGACAAAGGCTGCGGCATTTCTTGGGAATAAATTGATGACAGAATAAA  700

seq1  AACAGATTCCTCAGATCTTTAGGCTAAATAATAATGAGTAAAAGACGCCG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGATTCCTCAGATCTTTAGGCTAAATAATAATGAGTAAAAGACGCCG  750

seq1  GTTGACTGACGCATTTCCAAAATGATTGTTGCATGAGGAACCCAAAATGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGACTGACGCATTTCCAAAATGATTGTTGCATGAGGAACCCAAAATGT  800

seq1  ATTCGGTGTACCCTAAGGTACAGAATTTACTAGAGCTGTAGAGGATGAGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCGGTGTACCCTAAGGTACAGAATTTACTAGAGCTGTAGAGGATGAGA  850

seq1  TGCCCTGCATTTATCACGCTCTCTTCCTACTCTGTGTTCTGTTTTTAAAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCTGCATTTATCACGCTCTCTTCCTACTCTGTGTTCTGTTTTTAAAT  900

seq1  TACCATAATAATGTATATTACAGGCATGGCTTTCGAAGTCTACAGAAGGA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCATAATAATGTATATTACAGGCATGGCTTTCGAAGTCTACAGAAGGA  950

seq1  GTCGTATTTTGATGAACAGATGTAAATATCTTTACACCAAATAGTAAATC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCGTATTTTGATGAACAGATGTAAATATCTTTACACCAAATAGTAAATC  1000

seq1  TCTCACTCACCTCTATGCAAAGAGTATGCATAAGCTATGCATCAAATTGG  1050
      |||||||||| ||||||| |||||||||||||||||||||||| ||| ||
seq2  TCTCACTCACTTCTATGC-AAGAGTATGCATAAGCTATGCATC-AATGGG  1048

seq1  TTTCCTTTATTACATTTAATAAGTGATACCGAAAGACAACTATTTCAATA  1100
      |||||  |  ||||||||||| ||||||||||||||  ||||||||||||
seq2  TTTCC--TCATACATTTAATAGGTGATACCGAAAGA-TACTATTTCAATA  1095

seq1  GATGCTC--TTGTTAGTTTCTAGCCGTAG-TAAATTTACAGGGGCAGGTT  1147
      |||||||  |||||   ||| ||| |||| |||||||||  |||||||| 
seq2  GATGCTCCTTTGTTTAGTTCAAGCGGTAGTTAAATTTAC-TGGGCAGGTA  1144

seq1  ATCCACACACCCACTC-CAGGTTAGATAGTGAG---GTGCAGAAAATAGT  1193
      | ||||| |||||||| || | |||||||||||   || |||||| | | 
seq2  ACCCACATACCCACTCTCAAGGTAGATAGTGAGGGTGTCCAGAAATTGG-  1193

seq1  GAAAAGTTCATTTTAATACAGCTATTT-CAGGAA  1226
          |||||  ||| || ||||||||| ||||||
seq2  ---CAGTTCCATTT-ATTCAGCTATTTCCAGGAA  1223

seq1: chr2_75425208_75426250
seq2: B6Ng01-178K05.g_64_1081 (reverse)

seq1  CATTTTTAAAGGCAAGGTCTGAAATACAGTGGTACATACTAGAAATATAT  50
      ||||||   |||| |||||||  |||||||||||||||||||||||||||
seq2  CATTTT---AGGC-AGGTCTG-GATACAGTGGTACATACTAGAAATATAT  45

seq1  ATATATATATTTTTTTTTTTTTTTTTTGAGACAGGATTTCTCTGTATAGC  100
      |   |||||     ||||| ||||||||| ||||   ||||||| |||||
seq2  A---ATATA-----TTTTTGTTTTTTTGA-ACAG--ATTCTCTG-ATAGC  83

seq1  CCTGGCTGTCCTGGAACTCACTTTGTAGACAAGGCTGACCTCAAACTCAG  150
      |   ||||| |||| |||||| |||||||| |||||||| ||||||||||
seq2  C--TGCTGT-CTGG-ACTCACCTTGTAGAC-AGGCTGACTTCAAACTCAG  128

seq1  AAATCCGCCTGCCTCTGCCTCCCGAGTGCTGGGATTAAAGGCGTGTGCCA  200
      ||||||| ||||||||| ||||||||||||||||| ||||||||||||||
seq2  AAATCCG-CTGCCTCTG-CTCCCGAGTGCTGGGATAAAAGGCGTGTGCCA  176

seq1  CCACGCCCCAAGGAATATTTTCGATTAATTGTTTTAATCAGTGGTTCTTA  250
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  CCACGCCCCAAGGAATA-TTTCGATTAATTGTTTTAATCAGTGGTTCTTA  225

seq1  ACCTGTGAGTGGGAACCCCTTGGCAAACTTCTATCTCCAAAAATACTTAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGTGAGTGGGAACCCCTTGGCAAACTTCTATCTCCAAAAATACTTAC  275

seq1  ATTACAATTCATAACAGTAGCAAAATTACAGCTATGCAGTAGCAATGAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACAATTCATAACAGTAGCAAAATTACAGCTATGCAGTAGCAATGAAA  325

seq1  ATAATTTTAGGGTTGGGATCGTCACAACATGAGGAACTGTATTAAAGGGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATTTTAGGGTTGGGATCGTCACAACATGAGGAACTGTATTAAAGGGT  375

seq1  CACAGCATTAGGAAGGCTGAAAAACACTGGTTTTAATGAACACATACCCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGCATTAGGAAGGCTGAAAAACACTGGTTTTAATGAACACATACCCT  425

seq1  GGTATATAAATCACCTCACCTCACCTGTGTCCTAGGCAGAACCCACAGGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATATAAATCACCTCACCTCACCTGTGTCCTAGGCAGAACCCACAGGA  475

seq1  GAAGACATGTCTCCTGTCCCATCCCATGGCCCAGGTAGTATAATACTGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGACATGTCTCCTGTCCCATCCCATGGCCCAGGTAGTATAATACTGAA  525

seq1  GGCCAGTTCCCCAGCATCTCAAGGGTTAAATTCTTTGTTGTACCTAATTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCAGTTCCCCAGCATCTCAAGGGTTAAATTCTTTGTTGTACCTAATTT  575

seq1  TGAAAAACTAAAGCAACCTGCTTAGGCTGGTTCAGCAAGGGAACCAACCG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAAACTAAAGCAACCTGCTTAGGCTGGTTCAGCAAGGGAACCAACCG  625

seq1  TTTCATAATGAGGCTTGGCCTCGCCTGTCCCAGTAGAATTAATTTTGTGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATAATGAGGCTTGGCCTCGCCTGTCCCAGTAGAATTAATTTTGTGC  675

seq1  AGTAGAACACCTAGATAAATTAGTTTTGCTTTAAATATTGAGTCCTAAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGAACACCTAGATAAATTAGTTTTGCTTTAAATATTGAGTCCTAAAA  725

seq1  GAGTTAAAAGAGGGAGAATATCAATCAATAATTTTTACATTAACTACTTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTAAAAGAGGGAGAATATCAATCAATAATTTTTACATTAACTACTTT  775

seq1  GTATATGACAAAACAAAATTAACTTTGGCATTATAACCCCTTCATCTGGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATATGACAAAACAAAATTAACTTTGGCATTATAACCCCTTCATCTGGC  825

seq1  ATTTCTGACTGGCCCTGAGTTTTGAATAAAGAATTAGACGTCTTAAAAAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTGACTGGCCCTGAGTTTTGAATAAAGAATTAGACGTCTTAAAAAC  875

seq1  CAACCGACATGTGTTCTCTTGGCCCACAATACTAACTCACTGTGGGTTTG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCGACATGTGTTCTCTTGGCCCACAATACTAACTCACTGTGGGTTTG  925

seq1  TAAGAGATGTAATGGCTACCTACCATACATTTTCCAAGATTGTAAACATA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAGATGTAATGGCTACCTACCATACATTTTCCAAGATTGTAAACATA  975

seq1  ATTGCTACTTACTAAAGCAATCCTGTTCTGGAAAGAAGAATTC  1043
      |||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCTACTTACTAAAGCAATCCTGTTCTGGAAAGAAGAATTC  1018

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Alignment Information