BAC Information

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BAC

Clone NameB6Ng01-179C23
Chromosome2 (Build37)
Map Location 87,932,922 - 88,089,589
singlet/doubletdoublet
Overlap geneOlfr1164, Olfr1165, Olfr1166, Olfr1167, Olfr1168, Olfr1169-ps1, Olfr1170
Upstream geneOlfr1109, Olfr259, LOC668402, Olfr1110, Olfr1111, Olfr1112, LOC228238, Olfr1113, Olfr1114-ps1, LOC546767, Olfr1115, Olfr1521-ps1, LOC100041923, Olfr1117-ps1, GA_x5J8B7TY7N2-4-429, LOC668424, Olfr1118, Olfr1119-ps1, Olfr1120, Olfr1121, Olfr1122, LOC668432, Olfr1123, Olfr1125, Olfr1126, Pramel7, Pramel6, LOC668439, Olfr1127-ps1, Olfr253-ps1, Olfr1128, LOC100042038, LOC668445, LOC668447, Olfr1129, Olfr1130, Olfr1131, Olfr1132, LOC100042076, Olfr1133, Olfr1134, Olfr1135, Olfr1136, Olfr1137, Olfr1138, GA_x5J8B7W3Y5M-1033291-1033773, Olfr1140, Olfr1141, Olfr152, Olfr1142-ps1, Olfr1143, GA_x5J8B7W3Y5M-1094074-1093275, Olfr1145, Olfr1146-ps1, Olfr1147-ps1, Olfr1148, Olfr1149-ps1, Olfr1150-ps1, Olfr1151, Olfr1152, Olfr1153, Olfr1154, Olfr1155, Olfr1156, Olfr1157, Olfr74, Olfr1158, Olfr1159-ps1, Olfr1160, Olfr1161, Olfr73, Olfr1162, Olfr1163
Downstream geneOlfr1171-ps1, Olfr1172-ps1, Olfr1173, Olfr1174, Olfr1175, Olfr1176, Olfr1177, Olfr1178, Olfr1179, Olfr1180, Olfr1181, Olfr1182, Olfr1183, Olfr1184, Olfr1185-ps1, Olfr1186, Olfr1187-ps1, Olfr1188, LOC668528, Olfr1189, GA_x5J8B7W4NS2-37772-38277, Olfr475-ps1, Olfr526-ps1, Olfr1192-ps1, Olfr1193, Olfr1194-ps1, Olfr1195, Olfr1196, Olfr1197, Olfr1198, Olfr1199, Olfr1200, Olfr1201, Olfr1202, Olfr1203, Olfr1204, Olfr1206, Olfr1208, Olfr1209, Olfr1211, Olfr1212, Olfr1213, Olfr1214, Olfr1215, Olfr1216, Olfr1217, Olfr1218, Olfr1219, Olfr1220, Olfr1221, Olfr1222, Olfr1223, Olfr1224-ps1, Olfr1225, LOC435676, Olfr1226, LOC100042983, GA_x5J8B7TTH1T-1160-261, Olfr1227-ps1, Olfr1228
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-179C23.bB6Ng01-179C23.g
ACCGA005976GA005977
length1,0531,042
definitionB6Ng01-179C23.b B6Ng01-179C23.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(87,932,922 - 87,933,972)(88,088,552 - 88,089,589)
sequence
gaattctgaagacatattttctctatttcttacagttaattactaaagca
taattaaatttaatttttgtagacacacagaaattgtctgattttccaat
gaatatcactccattattgatagaaatagctaaaaattttcaatgaaata
tatgaagtatatttatgaaagtcattaaaaacttgtttgttatattgaat
gaaaaatacatttcaggtagattaactttctgacagtctccttgacatct
ttatttctaaggctgtagatgaggggattcagcatagggatgaccatgct
gtggaacacagtggctactttcacaagaaacagtgaacttttggatttga
gcacacagtatagtagaagaacgatcccatgacagacaccaatagctttc
aggtgggaggcacaggtggaaaatgcttttcggaaggccccctttgtggg
aattttgatgacagtgacaactataaaaacataggaagtgatgatgatca
agaggcaacaagcctcattaaacatggaaatgaccaggcatgccatttga
ctgaaggaggtgtctgagcaggacacagaaagcagagctgaatactcaca
gcaaaagtgatcgatgacattaggtccacagtaagagagctgcaaaagaa
tatatgtgagagttgaggaaaatatcccagcccatatgtaagtaattaca
accaggagggagcagagttcatgagacatagcaacagtgtagagcagagg
gttacagacagccacaaacctgtcataggccatcactgctaacatgaaca
tctctataatcacaaatgtacacccaagaaaatatttgagccatgcatcc
ttcaaaggagattgatttgtcttctacaatcaagaggtctaacagctttg
gtgcaattacagatgtatagcaaaaatcaacaaaggataagtggctgaga
aaaagtacataggagtgtggagttttgggattcatccttgatgataaatc
ataccagaattttcccaccacagttaccatgttcatgatcagaataccag
gta
gaattcatcgccagcctgattttcagagcaagttccaggacaactaggga
tacacattgaaaccccatctcaaaaacaaacagaaaaagcaaaatgaaaa
taaaatgaacaacataaatattcactagataaatttcttaagtcacaaat
aaaccattcacaatcttattacagtatgttcatttttattttgtaattaa
ataatttttattcttcttttataaaatatgtctcccatagtattctccct
cttcactccttcaagtacctcctcccttctctcccagatccattcttcct
ccatttccattcagaaaagagtaagagggcataacaagttacaataaaat
ttagcacaaattctcatattagaactgggagaggcagagactccaagggc
agacaaaagattcagcgacacctcaactatgacttctaggagtcccataa
agcccaaaaattaccaggttaacaactgtaacatatgtgcagaggtccta
gtgctaacccatgcaggctcccttgtttgcttccttttttctctgtgagg
tctatgagccttgtttagttgattctatgagctgtgttcttctggtgtcc
ttgacccctctggctcctacagttcttccttctcctcttctgtggacgac
tgaaatctgctgaaatatggattagacactcattccaatgtgatactaga
agtgtcactgctttttctgtattatattttacccatcattacccagatcc
atgttcagttcattttttttttctgtacaatttgtctttatagacatgta
acagcctgctgcctttctaacccttagtatggacatttcacttataggcc
actataaacttgggagaaatgtggaattcttgagatggtctgaatgacta
tattgtagaataggaagtcaggttcatatattattaaatttcccatacta
caacatgtttcatatgaccaacacatattttaaaagataatttatttctg
attgtggagcattgggcattgacatttaatgagataatgtat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_87932922_87933972
seq2: B6Ng01-179C23.b_45_1095

seq1  GAATTCTGAAGACATATTTTCTCTATTTCTTACAGTTAATTACTAAAGCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGAAGACATATTTTCTCTATTTCTTACAGTTAATTACTAAAGCA  50

seq1  TAATTAAATTTAATTTTTGTAGACACACAGAAATTGTCTGATTTTCCAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTAAATTTAATTTTTGTAGACACACAGAAATTGTCTGATTTTCCAAT  100

seq1  GAATATCACTCCATTATTGATAGAAATAGCTAAAAATTTTCAATGAAATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATATCACTCCATTATTGATAGAAATAGCTAAAAATTTTCAATGAAATA  150

seq1  TATGAAGTATATTTATGAAAGTCATTAAAAACTTGTTTGTTATATTGAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAAGTATATTTATGAAAGTCATTAAAAACTTGTTTGTTATATTGAAT  200

seq1  GAAAAATACATTTCAGGTAGATTAACTTTCTGACAGTCTCCTTGACATCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAATACATTTCAGGTAGATTAACTTTCTGACAGTCTCCTTGACATCT  250

seq1  TTATTTCTAAGGCTGTAGATGAGGGGATTCAGCATAGGGATGACCATGCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTCTAAGGCTGTAGATGAGGGGATTCAGCATAGGGATGACCATGCT  300

seq1  GTGGAACACAGTGGCTACTTTCACAAGAAACAGTGAACTTTTGGATTTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGAACACAGTGGCTACTTTCACAAGAAACAGTGAACTTTTGGATTTGA  350

seq1  GCACACAGTATAGTAGAAGAACGATCCCATGACAGACACCAATAGCTTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACACAGTATAGTAGAAGAACGATCCCATGACAGACACCAATAGCTTTC  400

seq1  AGGTGGGAGGCACAGGTGGAAAATGCTTTTCGGAAGGCCCCCTTTGTGGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGGGAGGCACAGGTGGAAAATGCTTTTCGGAAGGCCCCCTTTGTGGG  450

seq1  AATTTTGATGACAGTGACAACTATAAAAACATAGGAAGTGATGATGATCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTGATGACAGTGACAACTATAAAAACATAGGAAGTGATGATGATCA  500

seq1  AGAGGCAACAAGCCTCATTAAACATGGAAATGACCAGGCATGCCATTTGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGCAACAAGCCTCATTAAACATGGAAATGACCAGGCATGCCATTTGA  550

seq1  CTGAAGGAGGTGTCTGAGCAGGACACAGAAAGCAGAGCTGAATACTCACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAGGAGGTGTCTGAGCAGGACACAGAAAGCAGAGCTGAATACTCACA  600

seq1  GCAAAAGTGATCGATGACATTAGGTCCACAGTAAGAGAGCTGCAAAAGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAAGTGATCGATGACATTAGGTCCACAGTAAGAGAGCTGCAAAAGAA  650

seq1  TATATGTGAGAGTTGAGGAAAATATCCCAGCCCATATGTAAGTAATTACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATGTGAGAGTTGAGGAAAATATCCCAGCCCATATGTAAGTAATTACA  700

seq1  ACCAGGAGGGAGCAGAGTTCATGAGACATAGCAACAGTGTAGAGCAGAGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGGAGGGAGCAGAGTTCATGAGACATAGCAACAGTGTAGAGCAGAGG  750

seq1  GTTACAGACAGCCACAAACCTGTCATAGGCCATCACTGCTAACATGAACA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTACAGACAGCCACAAACCTGTCATAGGCCATCACTGCTAACATGAACA  800

seq1  TCTCTATAATCACAAATGTACACCCAAGAAAATA-TTGAGCCATGCATCC  849
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  TCTCTATAATCACAAATGTACACCCAAGAAAATATTTGAGCCATGCATCC  850

seq1  TTCAAAGGAGATTGATTTGTCTTCTACAATCAAGAGGTCTAACAGCTTTG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAAGGAGATTGATTTGTCTTCTACAATCAAGAGGTCTAACAGCTTTG  900

seq1  GTGCAATTACAGATGTATAGCAAAAATCAACAAAGGATAAGTGGCTGAGA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  GTGCAATTACAGATGTATAGCAAAAATCAACAAAGGATAAGTGGCTGAG-  949

seq1  AAAAAGTACATAGGAGTGTGGAG-TTTGGGATTCATCC-TGATGATAAAA  997
      ||||||||||||||||||||||| |||||||||||||| |||||||  ||
seq2  AAAAAGTACATAGGAGTGTGGAGTTTTGGGATTCATCCTTGATGAT--AA  997

seq1  ATCATACCAAGATTTT-CCAACACAGTAACCATGTACATGATCAAGAATA  1046
      |||||||||  ||||| ||| |||||| ||||||| ||||||| ||||||
seq2  ATCATACCAGAATTTTCCCACCACAGTTACCATGTTCATGATC-AGAATA  1046

seq1  CCAGG  1051
      |||||
seq2  CCAGG  1051

seq1: chr2_88088552_88089589
seq2: B6Ng01-179C23.g_64_1105 (reverse)

seq1  ATACATTATCTCCAATAAATGTCAATG-CCAATGCTCCACAATCAGAAAT  49
      ||||||||||| || |||||||||||| ||||||||||||||||||||||
seq2  ATACATTATCT-CATTAAATGTCAATGCCCAATGCTCCACAATCAGAAAT  49

seq1  AAA-TATCTTTTAAAATATGTGTTGGTCATATGAAACATGTTGTAGTAT-  97
      ||| ||||||||||||||||||||||||||||||||||||||||||||| 
seq2  AAATTATCTTTTAAAATATGTGTTGGTCATATGAAACATGTTGTAGTATG  99

seq1  GGAAATTTAAT-ATATATGAACCTGACTTCCTATTCTACAATATAGTCAT  146
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  GGAAATTTAATAATATATGAACCTGACTTCCTATTCTACAATATAGTCAT  149

seq1  TCAGACCATCTCAAGAATTCCACATTTCTCCAAAGTTTATAGTGGCCTAT  196
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  TCAGACCATCTCAAGAATTCCACATTTCTCCCAAGTTTATAGTGGCCTAT  199

seq1  AAGTGAAATGTCCATACTAAGGGTTAGAAAGGCAGCAGGCTGTTACATGT  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGAAATGTCCATACTAAGGGTTAGAAAGGCAGCAGGCTGTTACATGT  249

seq1  CTATAAAGACAAATTGTACAG-AAAAAAAAATGAACTGAACATGGATCTG  295
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  CTATAAAGACAAATTGTACAGAAAAAAAAAATGAACTGAACATGGATCTG  299

seq1  GGTAATGATGGGTAAAATATAATACAGAAAAAGCAGTGACACTTCTAGTA  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAATGATGGGTAAAATATAATACAGAAAAAGCAGTGACACTTCTAGTA  349

seq1  TCACATTGGAATGAGTGTCTAATCCATATTTCAGCAGATTTCAGTCGTCC  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACATTGGAATGAGTGTCTAATCCATATTTCAGCAGATTTCAGTCGTCC  399

seq1  ACAGAAGAGGAGAAGGAAGAACTGTAGGAGCCAGAGGGGTCAAGGACACC  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAAGAGGAGAAGGAAGAACTGTAGGAGCCAGAGGGGTCAAGGACACC  449

seq1  AGAAGAACACAGCTCATAGAATCAACTAAACAAGGCTCATAGACCTCACA  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGAACACAGCTCATAGAATCAACTAAACAAGGCTCATAGACCTCACA  499

seq1  GAGAAAAAAGGAAGCAAACAAGGGAGCCTGCATGGGTTAGCACTAGGACC  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAAAAAGGAAGCAAACAAGGGAGCCTGCATGGGTTAGCACTAGGACC  549

seq1  TCTGCACATATGTTACAGTTGTTAACCTGGTAATTTTTGGGCTTTATGGG  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCACATATGTTACAGTTGTTAACCTGGTAATTTTTGGGCTTTATGGG  599

seq1  ACTCCTAGAAGTCATAGTTGAGGTGTCGCTGAATCTTTTGTCTGCCCTTG  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCTAGAAGTCATAGTTGAGGTGTCGCTGAATCTTTTGTCTGCCCTTG  649

seq1  GAGTCTCTGCCTCTCCCAGTTCTAATATGAGAATTTGTGCTAAATTTTAT  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCTCTGCCTCTCCCAGTTCTAATATGAGAATTTGTGCTAAATTTTAT  699

seq1  TGTAACTTGTTATGCCCTCTTACTCTTTTCTGAATGGAAATGGAGGAAGA  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAACTTGTTATGCCCTCTTACTCTTTTCTGAATGGAAATGGAGGAAGA  749

seq1  ATGGATCTGGGAGAGAAGGGAGGAGGTACTTGAAGGAGTGAAGAGGGAGA  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGATCTGGGAGAGAAGGGAGGAGGTACTTGAAGGAGTGAAGAGGGAGA  799

seq1  ATACTATGGGAGACATATTTTATAAAAGAAGAATAAAAATTATTTAATTA  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTATGGGAGACATATTTTATAAAAGAAGAATAAAAATTATTTAATTA  849

seq1  CAAAATAAAAATGAACATACTGTAATAAGATTGTGAATGGTTTATTTGTG  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATAAAAATGAACATACTGTAATAAGATTGTGAATGGTTTATTTGTG  899

seq1  ACTTAAGAAATTTATCTAGTGAATATTTATGTTGTTCATTTTATTTTCAT  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTAAGAAATTTATCTAGTGAATATTTATGTTGTTCATTTTATTTTCAT  949

seq1  TTTGCTTTTTCTGTTTGTTTTTGAGATGGGGTTTCAATGTGTATCCCTAG  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCTTTTTCTGTTTGTTTTTGAGATGGGGTTTCAATGTGTATCCCTAG  999

seq1  TTGTCCTGGAACTTGCTCTGAAAATCAGGCTGGCGATGAATTC  1038
      |||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCCTGGAACTTGCTCTGAAAATCAGGCTGGCGATGAATTC  1042