BAC Information

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BAC

Clone NameB6Ng01-179I12
Chromosome2 (Build37)
Map Location 112,858,541 - 112,858,957
singlet/doubletsinglet
Overlap geneRyr3
Upstream geneOlfr1311, Olfr1312, Olfr1313, Olfr1314, Olfr1315-ps1, Olfr1316, Olfr1317, Olfr1318, GA_x5J8B7W3P0G-705890-705633, LOC100043187, Agpat7, Nut, Nola3, Slc12a6, Tmem85, EG668839, 2410042D21Rik, 2900064A13Rik, Chrm5, Aven
Downstream gene4930563P21Rik, Fmn1, Grem1, LOC100043520, Scg5, Arhgap11a, LOC100043526, Gja9, A530058N18Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-179I12.g
ACCGA006226
length411
definitionB6Ng01-179I12.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
cagaaaagagaaccatcacaggttactgtcaagggtttgaatattggttc
aggatatactgtaaggtatgccaagaaaaacaactgttggaatgccaact
atgagcaaagactcaagcatctactaagctctagggtggcgaaatttggt
gttgaagaggggcttagaaaacaaagactttttattgaagcccagaaaaa
ttaaattccacacataagaagtatactctaaagtgtgtgtgtgtgggggg
ggggaaggaagctaaaatacaccagggcagtataagaacaagtaggagac
ccatccataatttaactactttctaaaacaagatacaatcttccagggga
agataaaaggaagcttaataattacaaaagtacaatgtcctttatacagc
tatgtttctta
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_112858541_112858957
seq2: B6Ng01-179I12.g_65_481

seq1  GAATTCCAGAAAAGAGAACCATCACAGGTTACTGTCAAGGGTTTGAATAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGAAAAGAGAACCATCACAGGTTACTGTCAAGGGTTTGAATAT  50

seq1  TGGTTCAGGATATACTGTAAGGTATGCCAAGAAAAACAACTGTTGGAATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTCAGGATATACTGTAAGGTATGCCAAGAAAAACAACTGTTGGAATG  100

seq1  CCAACTATGAGCAAAGACTCAAGCATCTACTAAGCTCTAGGGTGGCGAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACTATGAGCAAAGACTCAAGCATCTACTAAGCTCTAGGGTGGCGAAA  150

seq1  TTTGGTGTTGAAGAGGGGCTTAGAAAACAAAGACTTTTTATTGAAGCCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGTGTTGAAGAGGGGCTTAGAAAACAAAGACTTTTTATTGAAGCCCA  200

seq1  GAAAAATTAAATTCCACACATAAGAAGTATACTCTAAAGTGTGTGTGTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAATTAAATTCCACACATAAGAAGTATACTCTAAAGTGTGTGTGTGT  250

seq1  GGGGGGGGGGAAGGAAGCTAAAATACACCAGGGCAGTATAAGAACAAGTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGGGGGGAAGGAAGCTAAAATACACCAGGGCAGTATAAGAACAAGTA  300

seq1  GGAGACCCATCCATAATTTAACTACTTTCTAAAACAAGATACAATCTTCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGACCCATCCATAATTTAACTACTTTCTAAAACAAGATACAATCTTCC  350

seq1  AGGGGAAGATAAAAGGAAGCAGAATAATTACAAAAGTACAATGTCCAGAA  400
      ||||||||||||||||||||  ||||||||||||||||||||||||   |
seq2  AGGGGAAGATAAAAGGAAGCTTAATAATTACAAAAGTACAATGTCCTTTA  400

seq1  TACAGCTATGTTTCTTA  417
      |||||||||||||||||
seq2  TACAGCTATGTTTCTTA  417